Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00505 Sequoiadendron giganteum HOM05D000104 ORTHO05D009762 1.0e-154 550.8 331 100.0
CANSAT25G1741 Cannabis sativa HOM05D000001 ORTHO05D000003 2.5e-07 61.2 132 27.3
RcHm_v2.0_Chr1g0326571 Rosa chinensis HOM05D006556 ORTHO05D008146 2.5e-07 61.2 78 41.0
SalBow4G1184 Salvia bowleyana HOM05D000001 ORTHO05D000003 2.5e-07 61.2 129 27.9
Cc10_g12890 Coffea canephora HOM05D000001 ORTHO05D000003 3.3e-07 60.8 131 26.7
SalBow4G1264 Salvia bowleyana HOM05D000001 ORTHO05D000003 4.3e-07 60.5 129 27.9
HPP92_021041 Vanilla planifolia HOM05D006842 ORTHO05D008908 4.3e-07 60.5 140 30.7
Atru.chr3.3387 Acer truncatum HOM05D000001 ORTHO05D000003 5.6e-07 60.1 135 30.4
arahy.Tifrunner.gnm1.ann1.JWX42Q Arachis hypogaea HOM05D000104 ORTHO05D009920 9.6e-07 59.3 102 29.4
FAN22G0540 Fragaria x ananassa HOM05D000001 ORTHO05D000648 9.6e-07 59.3 102 31.4
RcHm_v2.0_Chr2g0124781 Rosa chinensis HOM05D000001 ORTHO05D000003 9.6e-07 59.3 131 27.5
QL10p044765 Quercus lobata HOM05D007128 ORTHO05D009059 1.3e-06 58.9 285 20.4
SEGI_02268 Sequoiadendron giganteum HOM05D003975 ORTHO05D009762 1.3e-06 58.9 91 27.5
arahy.Tifrunner.gnm1.ann1.UTK222 Arachis hypogaea HOM05D000104 ORTHO05D009920 1.6e-06 58.5 102 29.4
arahy.Tifrunner.gnm1.ann1.W2W9XI Arachis hypogaea HOM05D000104 ORTHO05D009920 1.6e-06 58.5 92 31.5
Ciclev10024942m.g Citrus clementina HOM05D006819 ORTHO05D008763 1.6e-06 58.5 156 25.6
TWI36G0656 Tripterygium wilfordii HOM05D000001 ORTHO05D010426 1.6e-06 58.5 95 31.6
Gohir.D08G158800 Gossypium hirsutum HOM05D000104 ORTHO05D008354 2.1e-06 58.2 92 30.4
Gorai.004G164900 Gossypium raimondii HOM05D000104 ORTHO05D008354 2.1e-06 58.2 92 30.4
TWI38G0410 Tripterygium wilfordii HOM05D002453 ORTHO05D008746 2.1e-06 58.2 92 34.8
FAN15G0328 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.8e-06 57.8 133 29.3
FAN16G1411 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.8e-06 57.8 133 29.3
Glyma.05G026400 Glycine max HOM05D000001 ORTHO05D009806 3.6e-06 57.4 127 28.3
GSVIVG01013772001 Vitis vinifera HOM05D000037 ORTHO05D000648 3.6e-06 57.4 127 27.6
Actinidia01734 Actinidia chinensis HOM05D000001 ORTHO05D000003 4.8e-06 57.0 131 26.0
Ca_23477_v3 Cicer arietinum L. HOM05D000104 ORTHO05D009920 4.8e-06 57.0 92 31.5
Ciclev10003408m.g Citrus clementina HOM05D000001 ORTHO05D000003 4.8e-06 57.0 116 28.4
Thecc.01G387700 Theobroma cacao HOM05D000104 ORTHO05D009920 4.8e-06 57.0 92 29.3
TAR629G2452 Trochodendron aralioides HOM05D000001 ORTHO05D000648 4.8e-06 57.0 131 29.0
CiPaw.13G029800 Carya illinoinensis HOM05D000104 ORTHO05D009920 6.2e-06 56.6 102 28.4
Glyma.17G262700 Glycine max HOM05D000001 ORTHO05D000003 6.2e-06 56.6 131 29.0
Gorai.005G081500 Gossypium raimondii HOM05D000001 ORTHO05D000003 6.2e-06 56.6 93 30.1
Lj1g0001862 Lotus japonicus HOM05D000001 ORTHO05D009236 6.2e-06 56.6 133 27.1
VMungo0464G1434 Vigna mungo HOM05D000001 ORTHO05D000003 6.2e-06 56.6 131 28.2
MD02G1218600 Malus domestica HOM05D000104 ORTHO05D009920 8.1e-06 56.2 92 30.4
Manes.12G026900 Manihot esculenta HOM05D000001 ORTHO05D000648 8.1e-06 56.2 89 34.8
Medtr7g044790 Medicago truncatula HOM05D000104 ORTHO05D009920 8.1e-06 56.2 92 30.4
PGR102G0934 Punica granatum HOM05D000001 ORTHO05D010412 8.1e-06 56.2 131 26.7
THA.LOC104815527 Tarenaya hassleriana HOM05D000001 ORTHO05D000003 8.1e-06 56.2 131 26.0


User provided reference genes

Program Settings