Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00372 Sequoiadendron giganteum HOM05D005316 ORTHO05D006495 2.0e-59 232.3 121 100.0
MBI19_g03558_MAGBIO Magnolia biondii HOM05D005316 ORTHO05D006495 4.0e-31 138.3 82 75.6
vmacro07322 Vaccinium macrocarpon HOM05D005316 ORTHO05D006495 2.6e-30 135.6 83 75.9
PGR142G2834 Punica granatum HOM05D005316 ORTHO05D006495 7.5e-30 134.0 83 75.9
SGA_v2.0_scaffold40G15467 Striga asiatica HOM05D005316 ORTHO05D006495 4.1e-28 128.3 89 70.8
CSS0008696 Camellia sinensis var. sinensis HOM05D005316 ORTHO05D006495 2.7e-27 125.6 75 77.3
Psat7g226920 Pisum sativum HOM05D003193 ORTHO05D006495 1.7e-26 122.9 85 67.1
RcHm_v2.0_Chr2g0174151 Rosa chinensis HOM05D005316 ORTHO05D006495 1.3e-21 106.7 90 61.1
RcHm_v2.0_Chr7g0191911 Rosa chinensis HOM05D005316 ORTHO05D006495 2.3e-15 85.9 85 51.8
CAN.G363.3 Capsicum annuum HOM05D005316 ORTHO05D006495 1.8e-07 59.7 43 67.4
A09p49870 Brassica napus HOM05D003261 ORTHO05D004230 4.0e-07 58.5 62 40.3
BraA09t40438Z Brassica rapa HOM05D003261 ORTHO05D004230 4.0e-07 58.5 62 40.3
Cre10.g438700 Chlamydomonas reinhardtii HOM05D005316 ORTHO05D006495 2.0e-06 56.2 55 45.5
Peaxi162Scf00883g00035 Petunia axillaris HOM05D005323 ORTHO05D006820 2.0e-06 56.2 74 33.8
RcHm_v2.0_Chr7g0224541 Rosa chinensis HOM05D005316 ORTHO05D006495 2.6e-06 55.8 54 44.4
SHI00252 Sapria himalayana HOM05D003769 ORTHO05D014021 3.4e-06 55.5 58 41.4
Hund20540 Selenicereus undatus HOM05D003261 ORTHO05D004230 4.4e-06 55.1 72 37.5
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 5.8e-06 54.7 57 38.6
A07p16570 Brassica napus HOM05D002634 ORTHO05D003100 7.6e-06 54.3 55 45.5
SEGI_06199 Sequoiadendron giganteum HOM05D005323 ORTHO05D006820 7.6e-06 54.3 74 33.8
Aqoxy2G04128 Aquilegia oxysepala HOM05D001715 ORTHO05D003849 9.9e-06 53.9 66 36.4
HPP92_019310 Vanilla planifolia HOM05D001715 ORTHO05D003849 9.9e-06 53.9 66 36.4


User provided reference genes

Program Settings