Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00362 Sequoiadendron giganteum HOM05D002930 ORTHO05D003283 1.1e-217 759.6 373 100.0
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 2.4e-119 433.0 298 68.5
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 4.9e-112 408.7 298 65.4
Ca_09379_v3 Cicer arietinum L. HOM05D002930 ORTHO05D003283 6.4e-112 408.3 298 66.4
Lalb_Chr04g0260861 Lupinus albus HOM05D002930 ORTHO05D003283 6.4e-112 408.3 298 65.8
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 1.2e-110 404.1 296 65.9
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 1.6e-110 403.7 298 65.8
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 2.0e-110 403.3 301 63.8
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 6.0e-110 401.7 296 64.2
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.7e-109 400.2 295 63.7
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 1.7e-109 400.2 298 65.1
Phvul.006G095000 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 2.3e-109 399.8 299 65.6
CDE08G1581 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 3.0e-109 399.4 298 64.8
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 3.0e-109 399.4 298 65.1
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 6.6e-109 398.3 298 62.1
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 3.3e-108 396.0 298 63.8
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 3.3e-108 396.0 298 65.1
VMungo0540G0500 Vigna mungo HOM05D002930 ORTHO05D003283 5.6e-108 395.2 299 65.2
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 1.2e-107 394.0 299 63.9
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 2.8e-107 392.9 299 63.5
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 2.8e-107 392.9 298 64.1
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 3.6e-107 392.5 292 63.4
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 3.6e-107 392.5 298 63.1
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 4.7e-107 392.1 298 63.8
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 4.7e-107 392.1 298 63.4
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 8.0e-107 391.3 336 58.9
COL.COLO4_13526 Corchorus olitorius HOM05D002930 ORTHO05D003283 1.4e-106 390.6 303 60.4
HPP92_025233 Vanilla planifolia HOM05D002930 ORTHO05D003283 1.4e-106 390.6 296 62.8
Manes.05G071700 Manihot esculenta HOM05D002930 ORTHO05D003283 1.8e-106 390.2 301 63.1
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 3.1e-106 389.4 298 61.4
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 4.0e-106 389.0 298 62.1
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 8.9e-106 387.9 296 62.2
MBI19_g21645_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 2.6e-105 386.3 298 63.8
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 5.8e-105 385.2 296 62.8
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 5.8e-105 385.2 299 63.5
arahy.Tifrunner.gnm1.ann1.HQA39L Arachis hypogaea HOM05D002930 ORTHO05D003283 9.8e-105 384.4 296 62.8
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 1.7e-104 383.6 301 63.1
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 2.2e-104 383.3 298 62.1
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 2.2e-104 383.3 301 61.5
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 3.7e-104 382.5 299 62.5
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 3.7e-104 382.5 301 62.8
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 3.7e-104 382.5 299 62.5
Gohir.D13G110000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 6.4e-104 381.7 298 61.7
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 6.4e-104 381.7 303 62.7
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 8.3e-104 381.3 298 62.1
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 1.1e-103 380.9 302 62.3
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.1e-103 380.9 298 61.7
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 1.4e-103 380.6 298 60.7
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.9e-103 380.2 303 63.4
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.9e-103 380.2 298 61.4
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 1.9e-103 380.2 299 62.9
DCAR_022250 Daucus carota HOM05D002930 ORTHO05D003283 2.4e-103 379.8 303 59.4
Lj9C680G12 Lonicera japonica HOM05D002930 ORTHO05D003283 2.4e-103 379.8 358 53.9
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 3.2e-103 379.4 298 61.1
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 3.2e-103 379.4 305 63.3
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 4.1e-103 379.0 301 62.1
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 5.4e-103 378.6 301 62.5
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 5.4e-103 378.6 302 61.9
unitig_744.g24487 Utricularia gibba HOM05D002930 ORTHO05D003283 5.4e-103 378.6 299 61.5
PGSC0003DMG400003809 Solanum tuberosum HOM05D002930 ORTHO05D003283 9.2e-103 377.9 299 62.2
Actinidia21089 Actinidia chinensis HOM05D002930 ORTHO05D003283 1.2e-102 377.5 298 60.7
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 1.6e-102 377.1 301 61.5
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 2.0e-102 376.7 298 61.7
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 2.0e-102 376.7 301 62.8
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 2.7e-102 376.3 299 62.2
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 3.5e-102 375.9 301 61.8
CSS0043122 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 4.6e-102 375.6 298 60.7
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 6.0e-102 375.2 302 61.6
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 6.0e-102 375.2 301 62.5
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 6.0e-102 375.2 293 62.5
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 7.8e-102 374.8 299 60.2
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 1.0e-101 374.4 301 61.8
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 3.0e-101 372.9 298 61.7
Rhsim01G0277900 Rhododendron simsii HOM05D002930 ORTHO05D003283 3.0e-101 372.9 301 61.8
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 3.0e-101 372.9 301 60.8
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 6.6e-101 371.7 298 59.1
Gohir.A08G184940 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.5e-100 370.5 304 61.8
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 1.5e-100 370.5 301 60.1
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.5e-100 370.5 299 61.2
DCAR_012456 Daucus carota HOM05D002930 ORTHO05D003283 2.5e-100 369.8 298 59.4
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 2.5e-100 369.8 301 60.8
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 3.3e-100 369.4 331 56.8
Ciclev10018445m.g Citrus clementina HOM05D002930 ORTHO05D003283 4.3e-100 369.0 301 62.8
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 5.6e-100 368.6 298 60.4
FAN15G2723 Fragaria x ananassa HOM05D002930 ORTHO05D003283 5.6e-100 368.6 302 61.3
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 9.5e-100 367.9 301 60.5
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 1.2e-99 367.5 301 61.1
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 1.2e-99 367.5 301 61.1
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 1.2e-99 367.5 302 60.9
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.6e-99 367.1 304 60.9
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 3.6e-99 365.9 302 59.3
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 4.7e-99 365.5 298 60.1
Gohir.D08G203100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.7e-99 365.5 304 60.5
Hund05360 Selenicereus undatus HOM05D002930 ORTHO05D003283 6.2e-99 365.2 301 60.5
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 1.1e-98 364.4 301 60.1
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 1.8e-98 363.6 301 58.8
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 3.1e-98 362.8 298 59.4
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 8.9e-98 361.3 299 60.2
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 2.0e-97 360.1 302 59.9
Hma1.2p1_2318F.1_g319800 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 5.8e-97 358.6 298 59.4
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 9.9e-97 357.8 301 60.1
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 9.9e-97 357.8 309 59.5
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 1.3e-96 357.5 298 59.4
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.7e-96 357.1 309 59.5
Sed0024970 Sechium edule HOM05D002930 ORTHO05D003283 1.7e-96 357.1 301 58.8
VMungo0720G1472 Vigna mungo HOM05D002930 ORTHO05D003283 2.2e-96 356.7 302 59.9
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 2.9e-96 356.3 302 58.3
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 3.7e-96 355.9 304 59.5
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 6.4e-96 355.1 302 58.9
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 8.3e-96 354.8 303 59.1
Psat6g169840 Pisum sativum HOM05D002930 ORTHO05D003283 8.3e-96 354.8 302 59.6
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 1.1e-95 354.4 298 59.4
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 1.1e-95 354.4 302 59.6
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 2.4e-95 353.2 302 59.3
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 4.1e-95 352.4 302 58.9
arahy.Tifrunner.gnm1.ann1.K2UAY4 Arachis hypogaea HOM05D002930 ORTHO05D003283 5.4e-95 352.1 302 59.6
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 9.2e-95 351.3 303 58.7
arahy.Tifrunner.gnm1.ann1.M1RB0X Arachis hypogaea HOM05D002930 ORTHO05D003283 1.2e-94 350.9 302 59.6
A04p35160 Brassica napus HOM05D002930 ORTHO05D003283 1.6e-94 350.5 303 58.7
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 1.6e-94 350.5 303 58.7
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 2.1e-94 350.1 303 58.7
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 2.7e-94 349.7 303 58.7
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 2.7e-94 349.7 303 58.7
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 2.7e-94 349.7 303 58.7
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 2.7e-94 349.7 303 58.7
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 3.5e-94 349.4 307 58.6
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 3.5e-94 349.4 303 58.4
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 3.5e-94 349.4 303 59.1
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 4.6e-94 349.0 307 59.6
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 6.0e-94 348.6 303 58.4
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 6.0e-94 348.6 303 58.4
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 6.0e-94 348.6 301 57.8
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 5.1e-93 345.5 303 58.4
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 1.1e-92 344.4 303 58.1
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 1.7e-88 330.5 318 52.5
Cpa.g.sc9.131 Carica papaya HOM05D002930 ORTHO05D003283 8.4e-88 328.2 268 60.4
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 3.9e-85 319.3 288 52.8
AagrBONN_evm.TU.Sc2ySwM_228.583 Anthoceros agrestis HOM05D002930 ORTHO05D003283 8.7e-85 318.2 305 50.5
HPP92_017201 Vanilla planifolia HOM05D002930 ORTHO05D003283 9.6e-84 314.7 294 54.4
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 5.8e-81 305.4 307 51.5
Os01g0388500 Oryza sativa ssp. japonica HOM05D002930 ORTHO05D003283 1.3e-80 304.3 253 58.1
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 3.5e-78 296.2 298 52.3
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 4.6e-78 295.8 299 51.2
Aqoxy211s006 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.8e-74 283.9 199 66.8
SMO142G0015 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 7.1e-71 271.9 294 45.9
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.8e-67 260.0 213 62.0
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 3.2e-63 246.5 226 55.8
CBR_g45306 Chara braunii HOM05D002930 ORTHO05D000002 1.3e-61 241.1 293 43.7
CiPaw.07G096200 Carya illinoinensis HOM05D002930 ORTHO05D003283 9.0e-58 228.4 154 70.1
TAR375G0113 Trochodendron aralioides HOM05D002930 ORTHO05D003283 5.7e-52 209.1 169 60.9
Lj1A43G57 Lonicera japonica HOM05D002930 ORTHO05D003283 7.2e-47 192.2 126 73.0
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 8.8e-45 185.3 173 53.2
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 4.8e-43 179.5 170 51.2
SHI15436 Sapria himalayana HOM05D002930 ORTHO05D003283 2.4e-42 177.2 169 52.7
Prupe.2G260500 Prunus persica HOM05D002930 ORTHO05D003283 1.7e-32 144.4 102 68.6
MBI19_g46385_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 2.9e-32 143.7 82 80.5
Cre09.g402108 Chlamydomonas reinhardtii HOM05D002930 ORTHO05D003283 2.1e-22 110.9 94 56.4
PGSC0003DMG400028939 Solanum tuberosum HOM05D002930 ORTHO05D003283 2.8e-06 57.4 45 48.9


User provided reference genes

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