Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.3e-84 315.5 150 100.0
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 6.4e-31 137.9 87 70.1
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 6.4e-31 137.9 87 71.3
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 7.9e-29 131.0 87 67.8
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.3e-28 129.4 87 67.8
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.3e-28 129.4 87 67.8
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.3e-28 129.4 87 67.8
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 2.3e-28 129.4 87 69.0
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 2.3e-28 129.4 87 65.5
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 2.3e-28 129.4 87 65.5
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 3.0e-28 129.0 87 64.4
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 3.0e-28 129.0 87 69.0
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 3.0e-28 129.0 87 67.8
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 3.9e-28 128.6 87 66.7
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 3.9e-28 128.6 87 66.7
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 5.1e-28 128.3 87 66.7
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 6.7e-28 127.9 87 67.8
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 6.7e-28 127.9 87 67.8
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 6.7e-28 127.9 87 67.8
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 6.7e-28 127.9 87 66.7
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 8.7e-28 127.5 87 71.3
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 8.7e-28 127.5 87 67.8
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.1e-27 127.1 100 59.0
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 1.1e-27 127.1 87 66.7
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.5e-27 126.7 87 66.7
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.5e-27 126.7 87 66.7
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 1.5e-27 126.7 96 58.3
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 1.5e-27 126.7 87 66.7
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.5e-27 125.9 91 62.6
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 3.3e-27 125.6 87 63.2
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 3.3e-27 125.6 87 65.5
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 3.3e-27 125.6 87 65.5
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 4.3e-27 125.2 87 67.8
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 7.4e-27 124.4 90 64.4
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 66.7
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 7.4e-27 124.4 100 59.0
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 66.7
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 66.7
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 66.7
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 66.7
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 66.7
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 7.4e-27 124.4 99 60.6
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 66.7
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 7.4e-27 124.4 100 60.0
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 65.5
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 7.4e-27 124.4 87 65.5
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 9.6e-27 124.0 97 60.8
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 9.6e-27 124.0 97 60.8
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 9.6e-27 124.0 87 63.2
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 9.6e-27 124.0 87 63.2
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 9.6e-27 124.0 87 65.5
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 9.6e-27 124.0 87 66.7
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 1.3e-26 123.6 100 61.0
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.3e-26 123.6 87 66.7
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 1.6e-26 123.2 87 65.5
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 1.6e-26 123.2 100 60.0
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 1.6e-26 123.2 87 66.7
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 2.1e-26 122.9 87 67.8
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 2.1e-26 122.9 87 64.4
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 2.1e-26 122.9 100 61.0
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.1e-26 122.9 100 59.0
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 2.1e-26 122.9 87 63.2
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 2.8e-26 122.5 87 62.1
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 2.8e-26 122.5 87 65.5
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 4.8e-26 121.7 87 65.5
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 4.8e-26 121.7 99 57.6
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 8.2e-26 120.9 87 64.4
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 1.1e-25 120.6 87 62.1
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 1.1e-25 120.6 87 62.1
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 1.1e-25 120.6 87 62.1
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 1.1e-25 120.6 87 62.1
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.1e-25 120.6 87 62.1
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 1.4e-25 120.2 87 64.4
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.4e-25 120.2 100 59.0
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 1.8e-25 119.8 87 63.2
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 1.8e-25 119.8 87 64.4
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.8e-25 119.8 87 63.2
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 2.4e-25 119.4 87 60.9
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 2.4e-25 119.4 87 60.9
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 2.4e-25 119.4 87 60.9
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 2.4e-25 119.4 87 60.9
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 2.4e-25 119.4 87 60.9
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 2.4e-25 119.4 87 60.9
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 2.4e-25 119.4 84 65.5
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 2.4e-25 119.4 87 63.2
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 2.4e-25 119.4 87 63.2
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 3.1e-25 119.0 87 59.8
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 3.1e-25 119.0 87 60.9
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 3.1e-25 119.0 87 63.2
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 4.0e-25 118.6 87 64.4
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 5.3e-25 118.2 87 64.4
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 6.9e-25 117.9 87 59.8
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 6.9e-25 117.9 87 64.4
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 6.9e-25 117.9 87 65.5
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 6.9e-25 117.9 87 64.4
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 6.9e-25 117.9 87 64.4
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 6.9e-25 117.9 85 63.5
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 9.0e-25 117.5 87 59.8
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 9.0e-25 117.5 87 62.1
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 1.2e-24 117.1 97 55.7
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 1.5e-24 116.7 90 58.9
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 1.5e-24 116.7 97 55.7
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 4.5e-24 115.2 87 60.9
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 7.6e-24 114.4 87 62.1
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 1.0e-23 114.0 87 62.1
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 1.3e-23 113.6 97 56.7
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 2.2e-23 112.8 87 60.9
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.2e-23 112.8 87 60.9
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 3.8e-23 112.1 97 55.7
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 3.1e-17 92.4 83 54.2
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 2.2e-15 86.3 87 43.7
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 2.7e-13 79.3 47 72.3
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 2.7e-13 79.3 47 72.3
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.0e-12 77.4 93 41.9
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 1.0e-12 77.4 88 44.3
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.1e-09 67.4 59 57.6
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 1.2e-08 63.9 37 73.0


User provided reference genes

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