Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00308 Sequoiadendron giganteum HOM05D001081 ORTHO05D006714 1.1e-165 587.0 410 100.0
SEGI_18795 Sequoiadendron giganteum HOM05D000055 ORTHO05D000057 8.4e-41 172.2 91 96.7
SEGI_09809 Sequoiadendron giganteum HOM05D002861 ORTHO05D003104 2.5e-40 170.6 91 96.7
SEGI_40078 Sequoiadendron giganteum HOM05D003637 ORTHO05D004175 2.5e-40 170.6 91 96.7
SEGI_25499 Sequoiadendron giganteum HOM05D000058 ORTHO05D000255 4.2e-40 169.9 91 95.6
SEGI_33516 Sequoiadendron giganteum HOM05D003843 ORTHO05D004646 4.2e-40 169.9 91 95.6
SEGI_32695 Sequoiadendron giganteum HOM05D003356 ORTHO05D004362 2.2e-33 147.5 81 95.1
SEGI_27819 Sequoiadendron giganteum HOM05D002658 ORTHO05D003000 7.2e-32 142.5 81 91.4
SEGI_06105 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.8e-28 129.8 91 74.7
SEGI_18143 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 4.8e-28 129.8 91 74.7
SEGI_40021 Sequoiadendron giganteum HOM05D003008 ORTHO05D003346 2.4e-27 127.5 91 74.7
SEGI_13519 Sequoiadendron giganteum HOM05D001637 ORTHO05D002178 3.2e-24 117.1 77 80.5
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 1.6e-23 114.8 179 39.1
SEGI_40718 Sequoiadendron giganteum HOM05D001120 ORTHO05D002943 1.6e-23 114.8 91 69.2
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 2.1e-23 114.4 188 37.2
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 2.1e-23 114.4 91 68.1
Peaxi162Scf00740g00138 Petunia axillaris HOM05D001081 ORTHO05D004708 6.1e-23 112.8 177 37.9
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 1.4e-22 111.7 179 35.8
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 2.3e-22 110.9 186 36.0
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 3.0e-22 110.5 188 33.0
Hma1.2p1_0404F.1_g145360 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 3.9e-22 110.2 195 34.4
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 8.8e-22 109.0 186 33.3
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 8.8e-22 109.0 194 33.0
PSO170G6091 Papaver somniferum HOM05D001081 ORTHO05D004708 1.1e-21 108.6 199 32.2
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 1.5e-21 108.2 198 34.8
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 1.5e-21 108.2 194 32.0
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 2.0e-21 107.8 194 29.4
Aqoxy4G01595 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 2.5e-21 107.5 195 32.8
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 3.3e-21 107.1 194 33.0
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 4.3e-21 106.7 182 34.6
TWI39G0445 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 4.3e-21 106.7 195 35.4
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 5.7e-21 106.3 188 35.1
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 1.3e-20 105.1 179 33.0
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 1.7e-20 104.8 178 32.6
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 1.7e-20 104.8 179 34.6
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 3.7e-20 103.6 186 36.0
Eucgr.H05019 Eucalyptus grandis HOM05D001081 ORTHO05D004708 3.7e-20 103.6 194 32.5
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 3.7e-20 103.6 188 34.6
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 6.3e-20 102.8 185 33.0
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 6.3e-20 102.8 188 33.0
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 8.2e-20 102.4 202 34.2
Eucgr.G00091 Eucalyptus grandis HOM05D001081 ORTHO05D004708 8.2e-20 102.4 194 32.0
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 1.1e-19 102.1 185 33.0
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 1.1e-19 102.1 188 33.5
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 2.4e-19 100.9 186 32.3
Migut.F00209 Erythranthe guttata HOM05D001081 ORTHO05D004708 1.2e-18 98.6 194 29.9
Eucgr.K00385 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.2e-18 98.6 211 31.3
SEGI_14643 Sequoiadendron giganteum HOM05D003509 ORTHO05D004205 1.2e-18 98.6 72 72.2
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 1.5e-18 98.2 192 31.2
Pp3c8_21170 Physcomitrium patens HOM05D001081 ORTHO05D004708 2.0e-18 97.8 181 31.5
Pp3c8_21182 Physcomitrium patens HOM05D001081 ORTHO05D004708 2.0e-18 97.8 181 31.5
SEGI_05968 Sequoiadendron giganteum HOM05D003481 ORTHO05D011771 3.4e-18 97.1 81 67.9
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 4.5e-18 96.7 194 27.8
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 4.5e-18 96.7 176 30.7
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 5.9e-18 96.3 179 31.8
Solyc03g083130.3 Solanum lycopersicum HOM05D001081 ORTHO05D004708 7.7e-18 95.9 176 30.7
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 1.0e-17 95.5 176 31.2
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.0e-17 95.5 193 29.0
SEGI_39751 Sequoiadendron giganteum HOM05D004179 ORTHO05D005248 1.0e-17 95.5 81 65.4
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 2.2e-17 94.4 185 33.5
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 5.0e-17 93.2 194 27.8
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 5.0e-17 93.2 193 26.9
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 5.0e-17 93.2 195 28.7
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 6.5e-17 92.8 184 29.9
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 8.5e-17 92.4 188 32.4
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 1.1e-16 92.0 184 29.9
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 1.1e-16 92.0 184 28.8
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 1.1e-16 92.0 186 33.3
SEGI_06890 Sequoiadendron giganteum HOM05D009212 ORTHO05D005404 1.1e-16 92.0 75 68.0
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 1.4e-16 91.7 185 32.4
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 1.9e-16 91.3 180 32.2
COL.COLO4_16768 Corchorus olitorius HOM05D001081 ORTHO05D004708 1.9e-16 91.3 186 32.3
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 3.2e-16 90.5 176 32.4
HanXRQChr08g0225271 Helianthus annuus HOM05D001081 ORTHO05D003320 4.2e-16 90.1 172 29.7
Sp2g23080 Schrenkiella parvula HOM05D001081 ORTHO05D004708 4.2e-16 90.1 187 29.4
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 4.2e-16 90.1 186 32.3
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 5.5e-16 89.7 186 29.0
Cpa.g.sc3.89 Carica papaya HOM05D001081 ORTHO05D004708 7.2e-16 89.4 206 30.1
Potri.012G016100 Populus trichocarpa HOM05D001081 ORTHO05D004708 9.4e-16 89.0 182 29.1
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 1.2e-15 88.6 186 28.5
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 1.2e-15 88.6 186 28.5
HanXRQChr08g0225331 Helianthus annuus HOM05D001081 ORTHO05D004708 1.6e-15 88.2 178 28.7
BcaNung01800 Brassica carinata HOM05D001081 ORTHO05D004708 2.1e-15 87.8 187 29.9
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 2.7e-15 87.4 184 31.5
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 2.7e-15 87.4 181 32.6
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 3.6e-15 87.0 185 30.3
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 3.6e-15 87.0 184 28.8
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 3.6e-15 87.0 185 30.3
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 3.6e-15 87.0 185 30.3
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 6.1e-15 86.3 186 27.4
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 6.1e-15 86.3 186 27.4
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 7.9e-15 85.9 184 28.8
SEGI_07692 Sequoiadendron giganteum HOM05D009212 ORTHO05D011771 7.9e-15 85.9 67 68.7
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 1.8e-14 84.7 233 26.2
Ca_12793_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 3.0e-14 84.0 182 26.9
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 5.1e-14 83.2 214 26.2
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 6.7e-14 82.8 177 31.1
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 1.1e-13 82.0 187 31.0
Oeu041052.4 Olea europaea HOM05D001081 ORTHO05D004708 1.1e-13 82.0 190 28.4
Mapoly0111s0028 Marchantia polymorpha HOM05D001081 ORTHO05D004708 1.5e-13 81.6 185 30.3
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 2.0e-13 81.3 182 28.0
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 2.0e-13 81.3 182 26.9
Medtr1g007990 Medicago truncatula HOM05D001081 ORTHO05D004708 2.6e-13 80.9 182 27.5
Nitab4.5_0006933g0030 Nicotiana tabacum HOM05D001081 ORTHO05D004708 2.6e-13 80.9 154 32.5
SEGI_22363 Sequoiadendron giganteum HOM05D000931 ORTHO05D002226 3.3e-13 80.5 67 62.7
Pp3c22_17800 Physcomitrium patens HOM05D001081 ORTHO05D003320 2.8e-12 77.4 192 29.2
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 3.7e-12 77.0 216 29.2
FAN03G2990 Fragaria x ananassa HOM05D001081 ORTHO05D003320 1.4e-11 75.1 163 28.8
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 3.1e-11 73.9 235 26.0
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 5.3e-11 73.2 200 25.5
Eucgr.G00110 Eucalyptus grandis HOM05D001081 ORTHO05D004708 3.5e-10 70.5 167 29.3
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 5.9e-10 69.7 78 52.6
FvH4_7g32260 Fragaria vesca HOM05D001081 ORTHO05D003320 2.5e-08 64.3 193 28.0
SEGI_29730 Sequoiadendron giganteum HOM05D006001 ORTHO05D006714 2.5e-08 64.3 89 48.3
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 1.0e-06 58.9 118 32.2
SEGI_02000 Sequoiadendron giganteum HOM05D000106 ORTHO05D000160 6.7e-06 56.2 32 81.2


User provided reference genes

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