Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00303 Sequoiadendron giganteum HOM05D003669 ORTHO05D005046 1.5e-52 209.1 100 100.0
SEGI_21937 Sequoiadendron giganteum HOM05D003669 ORTHO05D005046 1.9e-15 85.9 84 54.8
Aqoxy3G03503 Aquilegia oxysepala HOM05D003669 ORTHO05D005046 3.2e-10 68.6 62 53.2
Psat7g135560 Pisum sativum HOM05D003669 ORTHO05D005046 1.6e-09 66.2 61 50.8
SalBow2G2159 Salvia bowleyana HOM05D003669 ORTHO05D005046 3.5e-09 65.1 60 53.3
SalBow2G3632 Salvia bowleyana HOM05D003669 ORTHO05D005046 3.5e-09 65.1 60 53.3
Nn4g23289 Nelumbo nucifera HOM05D003669 ORTHO05D005046 4.6e-09 64.7 60 51.7
Sc11g0002160 Simmondsia chinensis HOM05D003669 ORTHO05D005046 6.0e-09 64.3 60 51.7
CANSAT64G1602 Cannabis sativa HOM05D003669 ORTHO05D005046 7.9e-09 63.9 57 54.4
Migut.L01241 Erythranthe guttata HOM05D003669 ORTHO05D005046 7.9e-09 63.9 60 51.7
Peaxi162Scf00097g00103 Petunia axillaris HOM05D003669 ORTHO05D005046 7.9e-09 63.9 60 51.7
CiPaw.06G089100 Carya illinoinensis HOM05D003669 ORTHO05D005046 1.0e-08 63.5 60 48.3
Nitab4.5_0000391g0150 Nicotiana tabacum HOM05D003669 ORTHO05D005046 1.0e-08 63.5 60 51.7
Os07g0595900 Oryza sativa ssp. japonica HOM05D003669 ORTHO05D005046 1.0e-08 63.5 57 56.1
Phvul.002G168800 Phaseolus vulgaris HOM05D003669 ORTHO05D005046 1.0e-08 63.5 60 51.7
VMungo0251G2119 Vigna mungo HOM05D003669 ORTHO05D005046 1.0e-08 63.5 60 51.7
Glyma.07G227800 Glycine max HOM05D003669 ORTHO05D005046 1.3e-08 63.2 60 50.0
Glyma.20G030800 Glycine max HOM05D003669 ORTHO05D005046 1.3e-08 63.2 60 50.0
Peaxi162Scf00038g02649 Petunia axillaris HOM05D003669 ORTHO05D005046 1.3e-08 63.2 60 50.0
FAN04G2355 Fragaria x ananassa HOM05D003669 ORTHO05D005046 1.8e-08 62.8 60 50.0
Oeu041090.1 Olea europaea HOM05D003669 ORTHO05D005046 1.8e-08 62.8 60 50.0
TPR.G34083 Trifolium pratense HOM05D003669 ORTHO05D005046 1.8e-08 62.8 61 47.5
CAN.G964.18 Capsicum annuum HOM05D003669 ORTHO05D005046 2.3e-08 62.4 60 51.7
Hma1.2p1_0354F.1_g133780 Hydrangea macrophylla HOM05D003669 ORTHO05D005046 2.3e-08 62.4 60 50.0
Medtr4g082350 Medicago truncatula HOM05D003669 ORTHO05D005046 2.3e-08 62.4 61 47.5
RcHm_v2.0_Chr7g0221801 Rosa chinensis HOM05D003669 ORTHO05D005046 2.3e-08 62.4 57 52.6
AUR62032846 Chenopodium quinoa HOM05D003669 ORTHO05D005046 3.0e-08 62.0 66 47.0
Ca_23887_v3 Cicer arietinum L. HOM05D003669 ORTHO05D005046 3.0e-08 62.0 61 47.5
FvH4_5g29140 Fragaria vesca HOM05D003669 ORTHO05D005046 3.0e-08 62.0 57 52.6
FAN08G0960 Fragaria x ananassa HOM05D003669 ORTHO05D005046 3.0e-08 62.0 60 50.0
FAN18G1113 Fragaria x ananassa HOM05D003669 ORTHO05D005046 3.0e-08 62.0 57 52.6
Lj3P1033T30 Lonicera japonica HOM05D003669 ORTHO05D005046 3.0e-08 62.0 60 53.3
Prupe.1G280100 Prunus persica HOM05D003669 ORTHO05D005046 3.0e-08 62.0 60 48.3
ATR0730G059 Amborella trichopoda HOM05D003669 ORTHO05D005046 3.9e-08 61.6 60 50.0
AUR62005854 Chenopodium quinoa HOM05D003669 ORTHO05D005046 3.9e-08 61.6 66 47.0
Gohir.D13G078300 Gossypium hirsutum HOM05D003669 ORTHO05D005046 3.9e-08 61.6 57 52.6
PSO063G6284 Papaver somniferum HOM05D003669 ORTHO05D005046 3.9e-08 61.6 60 48.3
Rhsim12G0133100 Rhododendron simsii HOM05D003669 ORTHO05D005046 3.9e-08 61.6 57 52.6
MBI19_g28315_MAGBIO Magnolia biondii HOM05D003669 ORTHO05D005046 5.1e-08 61.2 60 50.0
Nitab4.5_0000141g0030 Nicotiana tabacum HOM05D003669 ORTHO05D005046 5.1e-08 61.2 60 50.0
Nitab4.5_0000720g0060 Nicotiana tabacum HOM05D003669 ORTHO05D005046 5.1e-08 61.2 60 50.0
QL03p069846 Quercus lobata HOM05D003669 ORTHO05D005046 5.1e-08 61.2 60 46.7
HPP92_023618 Vanilla planifolia HOM05D003669 ORTHO05D005046 5.1e-08 61.2 56 55.4
GSVIVG01012487001 Vitis vinifera HOM05D003669 ORTHO05D005046 5.1e-08 61.2 60 50.0
Atru.chr11.1711 Acer truncatum HOM05D003669 ORTHO05D005046 6.7e-08 60.8 60 48.3
Peaxi162Scf00222g00021 Petunia axillaris HOM05D003669 ORTHO05D005046 6.7e-08 60.8 60 48.3
EL10Ac6g13272 Beta vulgaris HOM05D003669 ORTHO05D005046 8.7e-08 60.5 60 46.7
CSS0031393 Camellia sinensis var. sinensis HOM05D003669 ORTHO05D005046 8.7e-08 60.5 60 48.3
CAN.G314.1 Capsicum annuum HOM05D003669 ORTHO05D005046 8.7e-08 60.5 60 48.3
Duzib251G0808 Durio zibethinus HOM05D003669 ORTHO05D005046 8.7e-08 60.5 57 50.9
Duzib268G1480 Durio zibethinus HOM05D003669 ORTHO05D005046 8.7e-08 60.5 57 50.9
Solyc01g010990.2 Solanum lycopersicum HOM05D003669 ORTHO05D005046 8.7e-08 60.5 60 48.3
Sopen01g006940 Solanum pennellii HOM05D003669 ORTHO05D005046 8.7e-08 60.5 60 48.3
PGSC0003DMG400026831 Solanum tuberosum HOM05D003669 ORTHO05D005046 8.7e-08 60.5 60 48.3
THA.LOC104822182 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 8.7e-08 60.5 77 44.2
CSS0046805 Camellia sinensis var. sinensis HOM05D003669 ORTHO05D005046 1.1e-07 60.1 57 50.9
CiPaw.05G129400 Carya illinoinensis HOM05D003669 ORTHO05D005046 1.1e-07 60.1 60 48.3
DCAR_023812 Daucus carota HOM05D003669 ORTHO05D005046 1.1e-07 60.1 60 50.0
Duzib248G1252 Durio zibethinus HOM05D003669 ORTHO05D005046 1.1e-07 60.1 57 50.9
MD13G1068000 Malus domestica HOM05D003669 ORTHO05D005046 1.1e-07 60.1 61 45.9
MD16G1066800 Malus domestica HOM05D003669 ORTHO05D005046 1.1e-07 60.1 61 45.9
PSO063G3148 Papaver somniferum HOM05D003669 ORTHO05D005046 1.1e-07 60.1 60 46.7
CARHR025320 Cardamine hirsuta HOM05D003669 ORTHO05D005046 1.5e-07 59.7 55 54.5
ECA233G0305 Erigeron canadensis HOM05D003669 ORTHO05D005046 1.5e-07 59.7 61 47.5
Lj4g0023966 Lotus japonicus HOM05D003669 ORTHO05D005046 1.5e-07 59.7 58 48.3
Nitab4.5_0028573g0010 Nicotiana tabacum HOM05D003669 ORTHO05D005046 1.5e-07 59.7 60 50.0
Potri.008G091500 Populus trichocarpa HOM05D003669 ORTHO05D005046 1.5e-07 59.7 60 46.7
Thecc.02G339000 Theobroma cacao HOM05D003669 ORTHO05D005046 1.5e-07 59.7 57 50.9
BcaB03g14707 Brassica carinata HOM05D003669 ORTHO05D005046 1.9e-07 59.3 59 49.2
Cpa.g.sc1.72 Carica papaya HOM05D003669 ORTHO05D005046 1.9e-07 59.3 60 46.7
Cfa008924 Carpinus fangiana HOM05D003669 ORTHO05D005046 1.9e-07 59.3 60 45.0
Haze_11953 Corylus avellana HOM05D003669 ORTHO05D005046 1.9e-07 59.3 60 45.0
Gorai.013G089500 Gossypium raimondii HOM05D003669 ORTHO05D005046 1.9e-07 59.3 57 50.9
HanXRQChr08g0211271 Helianthus annuus HOM05D003669 ORTHO05D005046 1.9e-07 59.3 61 45.9
Lalb_Chr09g0329151 Lupinus albus HOM05D003669 ORTHO05D005046 1.9e-07 59.3 57 50.9
Nn3g17339 Nelumbo nucifera HOM05D003669 ORTHO05D005046 1.9e-07 59.3 60 48.3
SGA_v2.0_scaffold16G07737 Striga asiatica HOM05D003669 ORTHO05D005046 1.9e-07 59.3 53 54.7
THA.LOC104822905 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 1.9e-07 59.3 57 50.9
Ah.03g134650 Amaranthus hybridus HOM05D003669 ORTHO05D005046 2.5e-07 58.9 60 46.7
COL.COLO4_27966 Corchorus olitorius HOM05D003669 ORTHO05D005046 2.5e-07 58.9 57 50.9
PGR102G2611 Punica granatum HOM05D003669 ORTHO05D005046 2.5e-07 58.9 60 46.7
THA.LOC104808637 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 2.5e-07 58.9 57 49.1
AL2G28540 Arabidopsis lyrata HOM05D003669 ORTHO05D005046 3.3e-07 58.5 58 48.3
AT1G69430 Arabidopsis thaliana HOM05D003669 ORTHO05D005046 3.3e-07 58.5 58 48.3
Cc11_g12530 Coffea canephora HOM05D003669 ORTHO05D005046 3.3e-07 58.5 60 48.3
unitig_8.g3190 Utricularia gibba HOM05D003669 ORTHO05D005046 3.3e-07 58.5 60 48.3
AL1G39080 Arabidopsis lyrata HOM05D003669 ORTHO05D005046 4.3e-07 58.2 55 52.7
AT1G26650 Arabidopsis thaliana HOM05D003669 ORTHO05D005046 4.3e-07 58.2 55 52.7
MSTRG.7776 Avicennia marina HOM05D003669 ORTHO05D005046 4.3e-07 58.2 60 46.7
Carub.0001s2438 Capsella rubella HOM05D003669 ORTHO05D005046 4.3e-07 58.2 55 52.7
CARHR062320 Cardamine hirsuta HOM05D003669 ORTHO05D005046 4.3e-07 58.2 73 42.5
Thhalv10008119m.g Eutrema salsugineum HOM05D003669 ORTHO05D005046 4.3e-07 58.2 55 52.7
Gohir.D02G127500 Gossypium hirsutum HOM05D003669 ORTHO05D005046 4.3e-07 58.2 65 44.6
Gorai.005G143100 Gossypium raimondii HOM05D003669 ORTHO05D005046 4.3e-07 58.2 65 44.6
Sabra08G0068500 Salix brachista HOM05D003669 ORTHO05D005046 4.3e-07 58.2 60 45.0
SpUn0008_0120 Schrenkiella parvula HOM05D003669 ORTHO05D005046 4.3e-07 58.2 55 52.7
SpUn0019_0020 Schrenkiella parvula HOM05D003669 ORTHO05D005046 4.3e-07 58.2 55 52.7
SpUn0296_0010 Schrenkiella parvula HOM05D003669 ORTHO05D005046 4.3e-07 58.2 55 52.7
Aa31LG4G11440 Aethionema arabicum HOM05D003669 ORTHO05D005046 5.7e-07 57.8 70 44.3
A07p35780 Brassica napus HOM05D003669 ORTHO05D005046 5.7e-07 57.8 58 48.3
C06p40420 Brassica napus HOM05D003669 ORTHO05D005046 5.7e-07 57.8 58 48.3
BolC6t39390H Brassica oleracea HOM05D003669 ORTHO05D005046 5.7e-07 57.8 58 48.3
BraA07t31164Z Brassica rapa HOM05D003669 ORTHO05D005046 5.7e-07 57.8 58 48.3
ClCG05G023980 Citrullus lanatus HOM05D003669 ORTHO05D005046 5.7e-07 57.8 55 50.9
Ciclev10033399m.g Citrus clementina HOM05D003669 ORTHO05D005046 5.7e-07 57.8 52 51.9
MELO3C012128.2 Cucumis melo HOM05D003669 ORTHO05D005046 5.7e-07 57.8 55 50.9
Thhalv10018794m.g Eutrema salsugineum HOM05D003669 ORTHO05D005046 5.7e-07 57.8 58 48.3
Manes.01G032000 Manihot esculenta HOM05D003669 ORTHO05D005046 5.7e-07 57.8 60 48.3
Sed0017288 Sechium edule HOM05D003669 ORTHO05D005046 5.7e-07 57.8 55 50.9
Carub.0002s1603 Capsella rubella HOM05D003669 ORTHO05D005046 7.4e-07 57.4 58 46.6
CDE02G4737 Ceratophyllum demersum HOM05D003669 ORTHO05D005046 7.4e-07 57.4 60 43.3
Gohir.A03G102600 Gossypium hirsutum HOM05D003669 ORTHO05D005046 7.4e-07 57.4 65 44.6
Lj6P783T30 Lonicera japonica HOM05D003669 ORTHO05D005046 7.4e-07 57.4 57 52.6
SEGI_22214 Sequoiadendron giganteum HOM05D003669 ORTHO05D005046 7.4e-07 57.4 86 40.7
Solyc05g012870.1 Solanum lycopersicum HOM05D003669 ORTHO05D005046 7.4e-07 57.4 60 46.7
PGSC0003DMG400028338 Solanum tuberosum HOM05D003669 ORTHO05D005046 7.4e-07 57.4 60 46.7
BcaC05g26402 Brassica carinata HOM05D003669 ORTHO05D005046 9.6e-07 57.0 55 50.9
A09p40060 Brassica napus HOM05D003669 ORTHO05D005046 9.6e-07 57.0 55 50.9
C05p24360 Brassica napus HOM05D003669 ORTHO05D005046 9.6e-07 57.0 55 50.9
BolC5t31170H Brassica oleracea HOM05D003669 ORTHO05D005046 9.6e-07 57.0 55 50.9
BraA09t39502Z Brassica rapa HOM05D003669 ORTHO05D005046 9.6e-07 57.0 55 50.9
PSO478G5197 Papaver somniferum HOM05D003669 ORTHO05D005046 9.6e-07 57.0 57 47.4
TWI31G0268 Tripterygium wilfordii HOM05D003669 ORTHO05D005046 9.6e-07 57.0 60 45.0
Aa31LG7G8440 Aethionema arabicum HOM05D003669 ORTHO05D005046 1.3e-06 56.6 56 50.0
CsaV3_5G033070 Cucumis sativus L. HOM05D003669 ORTHO05D005046 1.6e-06 56.2 55 50.9
TAR006G0001 Trochodendron aralioides HOM05D003669 ORTHO05D005046 1.6e-06 56.2 60 46.7
QL02p085710 Quercus lobata HOM05D003669 ORTHO05D012266 2.1e-06 55.8 58 55.2
Sp5g24480 Schrenkiella parvula HOM05D003669 ORTHO05D005046 2.8e-06 55.5 57 47.4
MSTRG.725 Avicennia marina HOM05D003669 ORTHO05D005046 3.7e-06 55.1 57 49.1
Potri.010G163400 Populus trichocarpa HOM05D003669 ORTHO05D005046 3.7e-06 55.1 60 43.3
Actinidia33230 Actinidia chinensis HOM05D003669 ORTHO05D005046 8.2e-06 53.9 52 51.9
HanXRQChr12g0379211 Helianthus annuus HOM05D003669 ORTHO05D005046 8.2e-06 53.9 62 43.5
TAR381G0119 Trochodendron aralioides HOM05D003669 ORTHO05D005046 8.2e-06 53.9 61 39.3


User provided reference genes

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