Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00232 Sequoiadendron giganteum HOM05D008409 ORTHO05D010483 6.1e-94 347.4 171 100.0
TAR627G0101 Trochodendron aralioides HOM05D008409 ORTHO05D010483 4.2e-42 175.3 150 56.7
CsaV3_7G004460 Cucumis sativus L. HOM05D008409 ORTHO05D010483 9.3e-42 174.1 154 53.9
Gohir.A04G103600 Gossypium hirsutum HOM05D008409 ORTHO05D010483 6.0e-41 171.4 155 52.9
Gorai.012G128600 Gossypium raimondii HOM05D008409 ORTHO05D010483 6.0e-41 171.4 155 52.9
Sed0018099 Sechium edule HOM05D008409 ORTHO05D010483 6.0e-41 171.4 154 53.9
MELO3C018733.2 Cucumis melo HOM05D008409 ORTHO05D010483 7.8e-41 171.0 154 52.6
Thecc.02G180200 Theobroma cacao HOM05D008409 ORTHO05D010483 2.3e-40 169.5 154 52.6
Haze_13167 Corylus avellana HOM05D008409 ORTHO05D010483 3.0e-40 169.1 154 53.9
Atru.chr6.2992 Acer truncatum HOM05D008409 ORTHO05D010483 3.9e-40 168.7 154 52.6
Aqoxy1G02429 Aquilegia oxysepala HOM05D008409 ORTHO05D010483 6.6e-40 167.9 151 53.6
Manes.12G089218 Manihot esculenta HOM05D008409 ORTHO05D010483 8.7e-40 167.5 148 54.7
Nn1g06548 Nelumbo nucifera HOM05D008409 ORTHO05D010483 8.7e-40 167.5 153 53.6
ATR0737G133 Amborella trichopoda HOM05D008409 ORTHO05D010483 1.1e-39 167.2 150 56.0
QL08p038864 Quercus lobata HOM05D008409 ORTHO05D010483 1.5e-39 166.8 154 51.9
GSVIVG01020550001 Vitis vinifera HOM05D008409 ORTHO05D010483 1.5e-39 166.8 151 53.6
Gohir.D04G143000 Gossypium hirsutum HOM05D008409 ORTHO05D010483 2.5e-39 166.0 155 51.6
Ciclev10017070m.g Citrus clementina HOM05D008409 ORTHO05D010483 4.3e-39 165.2 151 53.0
MD09G1247200 Malus domestica HOM05D008409 ORTHO05D010483 5.6e-39 164.9 153 52.9
ClCG07G002880 Citrullus lanatus HOM05D008409 ORTHO05D010483 7.3e-39 164.5 154 51.3
CiPaw.04G126300 Carya illinoinensis HOM05D008409 ORTHO05D010483 9.6e-39 164.1 154 51.3
CAN.G578.4 Capsicum annuum HOM05D008409 ORTHO05D010483 1.6e-38 163.3 142 52.8
Sabra13G0110600 Salix brachista HOM05D008409 ORTHO05D010483 6.2e-38 161.4 156 48.1
Peaxi162Scf00059g01918 Petunia axillaris HOM05D008409 ORTHO05D010483 8.1e-38 161.0 147 50.3
Actinidia11031 Actinidia chinensis HOM05D008409 ORTHO05D010483 1.8e-37 159.8 154 50.6
Potri.013G131000 Populus trichocarpa HOM05D008409 ORTHO05D010483 1.8e-37 159.8 149 51.7
COL.COLO4_30195 Corchorus olitorius HOM05D008409 ORTHO05D010483 1.2e-36 157.1 141 53.2
Sopen10g004190 Solanum pennellii HOM05D008409 ORTHO05D010483 1.2e-36 157.1 143 51.7
PGSC0003DMG400013143 Solanum tuberosum HOM05D008409 ORTHO05D010483 1.2e-36 157.1 147 49.7
PGR142G1945 Punica granatum HOM05D008409 ORTHO05D010483 1.5e-36 156.8 154 50.0
Os08g0374000 Oryza sativa ssp. japonica HOM05D008409 ORTHO05D010483 3.4e-36 155.6 149 51.0
Solyc10g008330.4 Solanum lycopersicum HOM05D008409 ORTHO05D010483 7.6e-36 154.5 149 49.0
PSO675G8696 Papaver somniferum HOM05D008409 ORTHO05D010483 1.3e-35 153.7 151 50.3
PSO541G0816 Papaver somniferum HOM05D008409 ORTHO05D010483 1.7e-35 153.3 150 50.0
TWI36G0630 Tripterygium wilfordii HOM05D008409 ORTHO05D010483 1.7e-35 153.3 154 48.7
MBI06_g04179_MAGBIO Magnolia biondii HOM05D008409 ORTHO05D010483 1.5e-31 140.2 151 49.0
CSS0031688 Camellia sinensis var. sinensis HOM05D008409 ORTHO05D010483 2.6e-28 129.4 147 45.6
Dinv23634 Davidia involucrata HOM05D008409 ORTHO05D010483 2.6e-28 129.4 102 56.9
Nitab4.5_0009473g0020 Nicotiana tabacum HOM05D008409 ORTHO05D010483 4.5e-28 128.6 153 45.1
vmacro12306 Vaccinium macrocarpon HOM05D008409 ORTHO05D010483 1.9e-26 123.2 121 49.6
QL08p038938 Quercus lobata HOM05D008409 ORTHO05D010483 2.3e-16 89.7 97 47.4
SMO332G0032 Selaginella moellendorffii HOM05D008409 ORTHO05D000186 2.8e-14 82.8 140 32.1
Mapoly0131s0013 Marchantia polymorpha HOM05D008409 ORTHO05D010483 4.8e-14 82.0 145 36.6
SMO141G0292 Selaginella moellendorffii HOM05D000322 ORTHO05D010483 1.2e-12 77.4 144 34.7
SMO337G0049 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 1.5e-12 77.0 151 27.8
ECA246G2358 Erigeron canadensis HOM05D000197 ORTHO05D000114 2.0e-12 76.6 155 32.9
unitig_22.g6474 Utricularia gibba HOM05D000197 ORTHO05D000114 5.8e-12 75.1 160 30.6
AagrBONN_evm.TU.Sc2ySwM_228.4478 Anthoceros agrestis HOM05D008409 ORTHO05D010483 3.8e-11 72.4 148 32.4
Actinidia15014 Actinidia chinensis HOM05D000197 ORTHO05D000114 5.0e-11 72.0 149 32.9
vmacro16272 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 1.9e-10 70.1 150 32.7
Lsat_1_v5_gn_3_48941 Lactuca sativa HOM05D000197 ORTHO05D000114 2.5e-10 69.7 153 32.0
SMO347G0071 Selaginella moellendorffii HOM05D008409 ORTHO05D010483 5.5e-10 68.6 149 32.2
TAR629G0887 Trochodendron aralioides HOM05D000197 ORTHO05D000114 7.1e-10 68.2 151 30.5
Hund05969 Selenicereus undatus HOM05D000197 ORTHO05D000114 2.7e-09 66.2 153 30.7
Pp3c7_19830 Physcomitrium patens HOM05D012277 ORTHO05D010483 3.5e-09 65.9 140 32.1
Pp3c7_19850 Physcomitrium patens HOM05D012277 ORTHO05D010483 3.5e-09 65.9 140 32.1
Ciclev10032973m.g Citrus clementina HOM05D000197 ORTHO05D000114 4.6e-09 65.5 153 32.0
RcHm_v2.0_Chr4g0444321 Rosa chinensis HOM05D000197 ORTHO05D000114 4.6e-09 65.5 155 31.6
Pp3c1_10460 Physcomitrium patens HOM05D012277 ORTHO05D010483 6.1e-09 65.1 123 32.5
ClCG05G025130 Citrullus lanatus HOM05D000197 ORTHO05D000114 7.9e-09 64.7 154 29.9
Potri.010G096000 Populus trichocarpa HOM05D000197 ORTHO05D000114 1.0e-08 64.3 153 32.0
Ah.03g132470 Amaranthus hybridus HOM05D000197 ORTHO05D000114 1.3e-08 63.9 156 27.6
MD13G1088200 Malus domestica HOM05D000197 ORTHO05D000114 1.3e-08 63.9 151 33.1
Prupe.1G258100 Prunus persica HOM05D000197 ORTHO05D000114 1.8e-08 63.5 153 30.1
ECA246G1386 Erigeron canadensis HOM05D001593 ORTHO05D010032 2.3e-08 63.2 148 30.4
Lj3A1050T27 Lonicera japonica HOM05D000197 ORTHO05D000114 2.3e-08 63.2 156 31.4
Sabra10G0068600 Salix brachista HOM05D000197 ORTHO05D000114 2.3e-08 63.2 131 34.4
MD16G1088600 Malus domestica HOM05D000197 ORTHO05D000114 3.0e-08 62.8 153 31.4
Mapoly0151s0036 Marchantia polymorpha HOM05D000322 ORTHO05D000186 3.0e-08 62.8 147 27.2
MD16G1024000 Malus domestica HOM05D000197 ORTHO05D000114 3.9e-08 62.4 128 31.2
AUR62013976 Chenopodium quinoa HOM05D000197 ORTHO05D000114 5.1e-08 62.0 156 28.8
THA.LOC104822191 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 5.1e-08 62.0 123 34.1
AUR62005328 Chenopodium quinoa HOM05D000197 ORTHO05D000114 6.7e-08 61.6 156 28.8
ECA246G1203 Erigeron canadensis HOM05D000226 ORTHO05D000114 8.7e-08 61.2 124 33.1
Eucgr.G02178 Eucalyptus grandis HOM05D000197 ORTHO05D000114 8.7e-08 61.2 153 26.8
HanXRQChr05g0156501 Helianthus annuus HOM05D001593 ORTHO05D010032 8.7e-08 61.2 150 28.7
Lj6C802G2 Lonicera japonica HOM05D000197 ORTHO05D000114 1.1e-07 60.8 144 30.6
SEGI_29216 Sequoiadendron giganteum HOM05D001593 ORTHO05D000001 1.1e-07 60.8 168 27.4
Aqoxy1G02445 Aquilegia oxysepala HOM05D001593 ORTHO05D002007 1.9e-07 60.1 150 28.7
CARHR064120 Cardamine hirsuta HOM05D000197 ORTHO05D000114 2.5e-07 59.7 154 30.5
Haze_10960 Corylus avellana HOM05D000197 ORTHO05D000114 4.3e-07 58.9 148 27.7
Lsat_1_v5_gn_5_7021 Lactuca sativa HOM05D001593 ORTHO05D010032 5.7e-07 58.5 150 27.3
PGR119G1738 Punica granatum HOM05D000197 ORTHO05D000114 5.7e-07 58.5 155 29.7
AL2G30370 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.3e-06 57.4 154 28.6
C02p28340 Brassica napus HOM05D000197 ORTHO05D000114 1.3e-06 57.4 154 27.3
BolC2t08879H Brassica oleracea HOM05D000197 ORTHO05D000114 1.3e-06 57.4 154 27.3
Carub.0002s1767 Capsella rubella HOM05D000197 ORTHO05D000114 1.3e-06 57.4 154 28.6
COL.COLO4_13140 Corchorus olitorius HOM05D000197 ORTHO05D000114 2.2e-06 56.6 150 27.3
DCAR_031085 Daucus carota HOM05D000197 ORTHO05D000114 2.2e-06 56.6 153 27.5
PGR119G2182 Punica granatum HOM05D000197 ORTHO05D000114 2.2e-06 56.6 156 28.8
SEGI_28220 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 2.2e-06 56.6 146 28.1
Carub.0002s1762 Capsella rubella HOM05D000197 ORTHO05D000114 2.8e-06 56.2 150 30.7
Dinv18606 Davidia involucrata HOM05D000197 ORTHO05D000114 2.8e-06 56.2 124 31.5
Dinv26222 Davidia involucrata HOM05D000197 ORTHO05D000114 2.8e-06 56.2 124 31.5
Ciclev10017055m.g Citrus clementina HOM05D000197 ORTHO05D000114 3.7e-06 55.8 149 27.5
PGR119G1671 Punica granatum HOM05D000197 ORTHO05D000114 3.7e-06 55.8 156 28.8
SEGI_04275 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 3.7e-06 55.8 161 28.0
SEGI_07497 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 3.7e-06 55.8 161 27.3
SEGI_11239 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 3.7e-06 55.8 161 27.3
GSVIVG01011733001 Vitis vinifera HOM05D000197 ORTHO05D000114 3.7e-06 55.8 148 29.1
AL2G30310 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 4.8e-06 55.5 159 27.0
A02p16970 Brassica napus HOM05D000197 ORTHO05D000114 4.8e-06 55.5 154 29.9
A04p11550 Brassica napus HOM05D000197 ORTHO05D000114 4.8e-06 55.5 154 29.9
A07p37290 Brassica napus HOM05D000197 ORTHO05D000114 4.8e-06 55.5 156 27.6
C06p35870 Brassica napus HOM05D000197 ORTHO05D000114 4.8e-06 55.5 154 29.2
BolC6t39553H Brassica oleracea HOM05D000197 ORTHO05D000114 4.8e-06 55.5 154 29.9
BraA04t16820Z Brassica rapa HOM05D000197 ORTHO05D000114 4.8e-06 55.5 154 29.9
Thhalv10019117m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 4.8e-06 55.5 154 28.6
Prupe.4G188300 Prunus persica HOM05D001593 ORTHO05D010032 4.8e-06 55.5 148 27.0
PGR119G0429 Punica granatum HOM05D000197 ORTHO05D000114 4.8e-06 55.5 151 28.5
PGR119G2054 Punica granatum HOM05D000197 ORTHO05D000114 4.8e-06 55.5 126 31.7
SEGI_23616 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 4.8e-06 55.5 145 28.3
AT1G70890 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 6.3e-06 55.1 159 29.6
BcaC03g15239 Brassica carinata HOM05D000197 ORTHO05D000114 6.3e-06 55.1 154 28.6
BolC2t08875H Brassica oleracea HOM05D000197 ORTHO05D000114 6.3e-06 55.1 154 29.9
CARHR064110 Cardamine hirsuta HOM05D000197 ORTHO05D000114 6.3e-06 55.1 159 30.2
CiPaw.06G047600 Carya illinoinensis HOM05D000197 ORTHO05D000114 6.3e-06 55.1 148 29.1
Dinv14414 Davidia involucrata HOM05D000197 ORTHO05D000114 6.3e-06 55.1 152 28.9
A08p28350 Brassica napus HOM05D000197 ORTHO05D000114 8.2e-06 54.7 159 28.9
BraA07t30725Z Brassica rapa HOM05D000197 ORTHO05D000114 8.2e-06 54.7 155 29.7
BraA08t34766Z Brassica rapa HOM05D000197 ORTHO05D000114 8.2e-06 54.7 159 28.9
Carub.0002s1761 Capsella rubella HOM05D000197 ORTHO05D000114 8.2e-06 54.7 155 30.3
Pp3c13_23010 Physcomitrium patens HOM05D012277 ORTHO05D010483 8.2e-06 54.7 123 29.3
Pp3c13_23030 Physcomitrium patens HOM05D012277 ORTHO05D010483 8.2e-06 54.7 123 29.3
Pp3c8_12660 Physcomitrium patens HOM05D008409 ORTHO05D010483 8.2e-06 54.7 119 30.3
SEGI_35132 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 8.2e-06 54.7 161 27.3


User provided reference genes

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