Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00210 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 6.6e-61 237.3 127 100.0
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 5.9e-09 64.7 50 64.0
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 6.5e-08 61.2 48 62.5
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 6.5e-08 61.2 62 58.1
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 1.4e-07 60.1 47 66.0
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 1.4e-07 60.1 48 58.3
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 1.9e-07 59.7 49 59.2
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 2.5e-07 59.3 48 62.5
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 3.2e-07 58.9 48 62.5
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 4.2e-07 58.5 66 57.6
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 5.5e-07 58.2 54 55.6
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 7.2e-07 57.8 48 58.3
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 7.2e-07 57.8 48 60.4
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 9.4e-07 57.4 48 60.4
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 9.4e-07 57.4 48 60.4
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 9.4e-07 57.4 48 56.2
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 9.4e-07 57.4 54 53.7
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 1.2e-06 57.0 49 57.1
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 1.2e-06 57.0 48 56.2
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 1.2e-06 57.0 48 58.3
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 1.2e-06 57.0 48 58.3
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 1.6e-06 56.6 48 56.2
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 2.1e-06 56.2 48 58.3
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 2.1e-06 56.2 48 58.3
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 2.1e-06 56.2 48 58.3
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 2.7e-06 55.8 49 57.1
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.7e-06 55.8 49 57.1
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.7e-06 55.8 49 57.1
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.7e-06 55.8 49 57.1
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 3.6e-06 55.5 48 56.2
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 3.6e-06 55.5 48 54.2
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 3.6e-06 55.5 48 56.2
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 3.6e-06 55.5 53 56.6
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 4.7e-06 55.1 48 58.3
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 4.7e-06 55.1 55 56.4
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 4.7e-06 55.1 49 57.1
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 4.7e-06 55.1 48 58.3
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 4.7e-06 55.1 48 56.2
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 6.1e-06 54.7 48 58.3
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 6.1e-06 54.7 75 45.3
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 7.9e-06 54.3 48 56.2
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 7.9e-06 54.3 48 54.2
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 7.9e-06 54.3 48 58.3


User provided reference genes

Program Settings