Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00170 Sequoiadendron giganteum HOM05D006661 ORTHO05D008369 1.5e-83 312.8 153 100.0
Os01g0559000 Oryza sativa ssp. japonica HOM05D006661 ORTHO05D008369 3.1e-57 225.3 131 82.4
Zm00001eb162230 Zea mays HOM05D006661 ORTHO05D008369 2.0e-56 222.6 131 80.9
Nn6g35396 Nelumbo nucifera HOM05D006661 ORTHO05D008369 5.9e-56 221.1 131 78.6
Gorai.010G102800 Gossypium raimondii HOM05D006661 ORTHO05D008369 3.8e-55 218.4 135 76.3
Actinidia01201 Actinidia chinensis HOM05D006661 ORTHO05D008369 1.1e-54 216.9 131 76.3
CDE07G0448 Ceratophyllum demersum HOM05D006661 ORTHO05D008369 4.2e-54 214.9 135 74.8
Rhsim11G0046400 Rhododendron simsii HOM05D006661 ORTHO05D008369 4.2e-54 214.9 131 75.6
Gohir.D06G089000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 5.5e-54 214.5 131 77.1
QL02p001540 Quercus lobata HOM05D006661 ORTHO05D008369 5.5e-54 214.5 131 76.3
CSS0024744 Camellia sinensis var. sinensis HOM05D006661 ORTHO05D008369 1.2e-53 213.4 131 76.3
Migut.A00149 Erythranthe guttata HOM05D006661 ORTHO05D008369 1.2e-53 213.4 131 74.8
Gohir.A06G090000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 1.6e-53 213.0 131 76.3
ATR0789G168 Amborella trichopoda HOM05D006661 ORTHO05D008369 2.1e-53 212.6 131 74.0
PSO063G2325 Papaver somniferum HOM05D006661 ORTHO05D008369 2.7e-53 212.2 138 72.5
vmacro00160 Vaccinium macrocarpon HOM05D006661 ORTHO05D008369 2.7e-53 212.2 129 76.7
CAN.G6.20 Capsicum annuum HOM05D006661 ORTHO05D008369 4.7e-53 211.5 135 70.4
Hund03354 Selenicereus undatus HOM05D006661 ORTHO05D008369 4.7e-53 211.5 131 74.0
TAR383G0029 Trochodendron aralioides HOM05D006661 ORTHO05D008369 6.1e-53 211.1 131 75.6
PGR031G2394 Punica granatum HOM05D006661 ORTHO05D008369 8.0e-53 210.7 131 74.0
MSTRG.11669 Avicennia marina HOM05D006661 ORTHO05D008369 1.0e-52 210.3 131 72.5
Ciclev10009515m.g Citrus clementina HOM05D006661 ORTHO05D008369 1.0e-52 210.3 131 73.3
SGA_v2.0_scaffold88G27220 Striga asiatica HOM05D006661 ORTHO05D008369 1.0e-52 210.3 131 74.0
CiPaw.16G029900 Carya illinoinensis HOM05D006661 ORTHO05D008369 1.4e-52 209.9 131 73.3
ECA233G6145 Erigeron canadensis HOM05D006661 ORTHO05D008369 1.4e-52 209.9 131 74.0
Lsat_1_v5_gn_6_13140 Lactuca sativa HOM05D006661 ORTHO05D008369 1.4e-52 209.9 131 73.3
Thecc.09G051500 Theobroma cacao HOM05D006661 ORTHO05D008369 1.4e-52 209.9 131 74.8
HanXRQChr09g0251201 Helianthus annuus HOM05D006661 ORTHO05D008369 1.8e-52 209.5 131 74.0
Medtr2g018310 Medicago truncatula HOM05D006661 ORTHO05D008369 1.8e-52 209.5 131 71.8
TPR.G20633 Trifolium pratense HOM05D006661 ORTHO05D008369 1.8e-52 209.5 131 72.5
ClCG08G016930 Citrullus lanatus HOM05D006661 ORTHO05D008369 2.3e-52 209.1 136 72.8
Hma1.2p1_0450F.1_g155690 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 2.3e-52 209.1 124 77.4
unitig_748.g7518 Utricularia gibba HOM05D006661 ORTHO05D008369 2.3e-52 209.1 131 71.8
HPP92_005507 Vanilla planifolia HOM05D006661 ORTHO05D008369 2.3e-52 209.1 135 69.6
GSVIVG01035347001 Vitis vinifera HOM05D006661 ORTHO05D008369 2.3e-52 209.1 136 74.3
arahy.Tifrunner.gnm1.ann1.R5Q5WD Arachis hypogaea HOM05D006661 ORTHO05D008369 3.0e-52 208.8 131 71.8
Duzib187G1697 Durio zibethinus HOM05D006661 ORTHO05D008369 3.0e-52 208.8 131 74.0
SalBow4G0568 Salvia bowleyana HOM05D006661 ORTHO05D008369 3.0e-52 208.8 131 74.0
Cfa017936 Carpinus fangiana HOM05D006661 ORTHO05D008369 5.2e-52 208.0 131 73.3
PSO832G3146 Papaver somniferum HOM05D006661 ORTHO05D008369 6.8e-52 207.6 131 73.3
Sp4g05860 Schrenkiella parvula HOM05D006661 ORTHO05D008369 6.8e-52 207.6 131 73.3
Aqoxy7G01325 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 8.8e-52 207.2 131 73.3
arahy.Tifrunner.gnm1.ann1.KA607S Arachis hypogaea HOM05D006661 ORTHO05D008369 8.8e-52 207.2 131 71.0
Glyma.13G222200 Glycine max HOM05D006661 ORTHO05D008369 8.8e-52 207.2 131 71.8
Psat1g192360 Pisum sativum HOM05D006661 ORTHO05D008369 8.8e-52 207.2 131 71.0
Cc08_g10380 Coffea canephora HOM05D006661 ORTHO05D008369 1.2e-51 206.8 131 71.8
BcaC02g08315 Brassica carinata HOM05D006661 ORTHO05D008369 1.5e-51 206.5 131 74.0
C04p55870 Brassica napus HOM05D006661 ORTHO05D008369 1.5e-51 206.5 131 74.0
BolC4t27119H Brassica oleracea HOM05D006661 ORTHO05D008369 1.5e-51 206.5 131 74.0
CsaV3_2G025680 Cucumis sativus L. HOM05D006661 ORTHO05D008369 1.5e-51 206.5 136 71.3
Potri.018G056100 Populus trichocarpa HOM05D006661 ORTHO05D008369 1.5e-51 206.5 131 71.0
Sabra06G0181100 Salix brachista HOM05D006661 ORTHO05D008369 1.5e-51 206.5 131 70.2
TWI34G0500 Tripterygium wilfordii HOM05D006661 ORTHO05D008369 1.5e-51 206.5 131 72.5
AL4G18030 Arabidopsis lyrata HOM05D006661 ORTHO05D008369 2.0e-51 206.1 131 74.0
BcaB06g29613 Brassica carinata HOM05D006661 ORTHO05D008369 2.0e-51 206.1 131 74.0
Thhalv10002098m.g Eutrema salsugineum HOM05D006661 ORTHO05D008369 2.0e-51 206.1 131 74.0
Peaxi162Scf00436g00823 Petunia axillaris HOM05D006661 ORTHO05D008369 2.6e-51 205.7 136 68.4
Solyc08g065640.3 Solanum lycopersicum HOM05D006661 ORTHO05D008369 2.6e-51 205.7 131 70.2
PGSC0003DMG400002199 Solanum tuberosum HOM05D006661 ORTHO05D008369 2.6e-51 205.7 131 70.2
Ca_00502_v3 Cicer arietinum L. HOM05D006661 ORTHO05D008369 3.4e-51 205.3 131 71.0
Eucgr.H03073 Eucalyptus grandis HOM05D006661 ORTHO05D008369 3.4e-51 205.3 131 71.8
Lj8A552G6 Lonicera japonica HOM05D006661 ORTHO05D008369 3.4e-51 205.3 124 75.8
Sopen08g019360 Solanum pennellii HOM05D006661 ORTHO05D008369 3.4e-51 205.3 131 70.2
Atru.chr7.2017 Acer truncatum HOM05D006661 ORTHO05D008369 4.4e-51 204.9 131 73.3
Aa31LG5G9740 Aethionema arabicum HOM05D006661 ORTHO05D008369 4.4e-51 204.9 131 74.0
AUR62022048 Chenopodium quinoa HOM05D006661 ORTHO05D008369 5.7e-51 204.5 131 71.0
Haze_18212 Corylus avellana HOM05D006661 ORTHO05D008369 5.7e-51 204.5 124 75.8
Lj4g0006609 Lotus japonicus HOM05D006661 ORTHO05D008369 5.7e-51 204.5 131 71.0
Nitab4.5_0000359g0060 Nicotiana tabacum HOM05D006661 ORTHO05D008369 5.7e-51 204.5 131 70.2
Carub.0004s0581 Capsella rubella HOM05D006661 ORTHO05D008369 7.5e-51 204.1 131 73.3
CANSAT25G2346 Cannabis sativa HOM05D006661 ORTHO05D008369 1.7e-50 203.0 136 71.3
AUR62009178 Chenopodium quinoa HOM05D006661 ORTHO05D008369 2.2e-50 202.6 131 69.5
THA.LOC104803733 Tarenaya hassleriana HOM05D006661 ORTHO05D008369 2.2e-50 202.6 135 68.1
CARHR287330 Cardamine hirsuta HOM05D006661 ORTHO05D008369 3.7e-50 201.8 131 71.8
FvH4_2g32150 Fragaria vesca HOM05D006661 ORTHO05D008369 3.7e-50 201.8 135 68.1
FAN24G0958 Fragaria x ananassa HOM05D006661 ORTHO05D008369 3.7e-50 201.8 135 68.1
MD08G1044700 Malus domestica HOM05D006661 ORTHO05D008369 3.7e-50 201.8 135 69.6
Sed0008959 Sechium edule HOM05D006661 ORTHO05D008369 4.8e-50 201.4 136 70.6
DCAR_003069 Daucus carota HOM05D006661 ORTHO05D008369 8.3e-50 200.7 123 73.2
FAN15G2916 Fragaria x ananassa HOM05D006661 ORTHO05D008369 1.1e-49 200.3 135 68.1
FAN20G2753 Fragaria x ananassa HOM05D006661 ORTHO05D008369 1.1e-49 200.3 135 68.1
RcHm_v2.0_Chr6g0310531 Rosa chinensis HOM05D006661 ORTHO05D008369 1.1e-49 200.3 135 68.1
Phvul.006G168200 Phaseolus vulgaris HOM05D006661 ORTHO05D008369 1.8e-49 199.5 131 68.7
VMungo0540G1431 Vigna mungo HOM05D006661 ORTHO05D008369 1.8e-49 199.5 131 69.5
Cpa.g.sc7.195 Carica papaya HOM05D006661 ORTHO05D008369 2.4e-49 199.1 125 73.6
Lalb_Chr18g0055101 Lupinus albus HOM05D006661 ORTHO05D008369 3.1e-49 198.7 131 67.9
Prupe.1G414600 Prunus persica HOM05D006661 ORTHO05D008369 4.1e-49 198.4 135 67.4
A04p20170 Brassica napus HOM05D006661 ORTHO05D008369 7.0e-49 197.6 124 75.0
BraA04t17597Z Brassica rapa HOM05D006661 ORTHO05D008369 7.0e-49 197.6 124 75.0
AT2G25950 Arabidopsis thaliana HOM05D006661 ORTHO05D008369 9.1e-49 197.2 124 75.0
CANSAT78G0664 Cannabis sativa HOM05D006661 ORTHO05D008369 9.1e-49 197.2 127 73.2
Duzib168G0126 Durio zibethinus HOM05D000575 ORTHO05D008369 9.1e-49 197.2 124 72.6
Pp3c22_18330 Physcomitrium patens HOM05D006661 ORTHO05D008369 9.1e-49 197.2 130 67.7
Nitab4.5_0001179g0020 Nicotiana tabacum HOM05D006661 ORTHO05D008369 1.6e-48 196.4 131 69.5
AagrBONN_evm.TU.Sc2ySwM_362.2052 Anthoceros agrestis HOM05D006661 ORTHO05D008369 2.0e-48 196.1 137 66.4
Manes.16G078200 Manihot esculenta HOM05D006661 ORTHO05D008369 4.5e-48 194.9 128 68.8
MELO3C030341.2 Cucumis melo HOM05D006661 ORTHO05D008369 5.5e-46 188.0 137 66.4
FAN27G1843 Fragaria x ananassa HOM05D006661 ORTHO05D008369 3.6e-45 185.3 120 70.0
SMO169G0297 Selaginella moellendorffii HOM05D006661 ORTHO05D008369 3.0e-44 182.2 124 66.1
CBR_g22258 Chara braunii HOM05D006661 ORTHO05D008369 5.2e-44 181.4 131 60.3
Aqoxy6G02410 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 2.8e-42 175.6 131 64.9
Oeu036347.1 Olea europaea HOM05D006661 ORTHO05D008369 4.1e-41 171.8 103 74.8
Hma1.2p1_2451F.1_g322380 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 1.2e-40 170.2 100 76.0
EL10Ac2g03924 Beta vulgaris HOM05D006661 ORTHO05D008369 4.7e-37 158.3 108 68.5
CANSAT25G1095 Cannabis sativa HOM05D006661 ORTHO05D008369 8.9e-36 154.1 96 71.9
MCO14G523 Micromonas commoda HOM05D006661 ORTHO05D008369 3.3e-30 135.6 127 48.8
QL02p001525 Quercus lobata HOM05D006661 ORTHO05D008369 9.5e-30 134.0 88 69.3
PRCOL_00000611 Prasinoderma coloniale HOM05D006661 ORTHO05D008369 3.2e-25 119.0 126 43.7
Sabra06G0180500 Salix brachista HOM05D006661 ORTHO05D008369 2.1e-21 106.3 67 71.6
Sc23g0005520 Simmondsia chinensis HOM05D006661 ORTHO05D008369 2.1e-21 106.3 67 73.1
Cre02.g110450 Chlamydomonas reinhardtii HOM05D006661 ORTHO05D008369 5.8e-19 98.2 135 40.7
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 2.6e-11 72.8 45 73.3
arahy.Tifrunner.gnm1.ann1.K04B1Q Arachis hypogaea HOM05D006661 ORTHO05D008369 2.6e-11 72.8 45 73.3
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 2.6e-11 72.8 45 73.3
arahy.Tifrunner.gnm1.ann1.XSX4PG Arachis hypogaea HOM05D006661 ORTHO05D008369 9.9e-11 70.9 45 71.1
Cfa026513 Carpinus fangiana HOM05D006661 ORTHO05D008369 8.4e-10 67.8 152 28.9


User provided reference genes

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