Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00039 Sequoiadendron giganteum HOM05D005757 ORTHO05D007090 9.3e-80 300.1 143 100.0
MELO3C023217.2 Cucumis melo HOM05D005757 ORTHO05D007090 3.6e-23 112.1 94 61.7
Nn1g08970 Nelumbo nucifera HOM05D005757 ORTHO05D007090 3.6e-23 112.1 107 53.3
Dinv16327 Davidia involucrata HOM05D005757 ORTHO05D007090 6.2e-23 111.3 108 51.9
TAR625G0433 Trochodendron aralioides HOM05D005757 ORTHO05D007090 8.0e-23 110.9 85 61.2
CsaV3_2G019560 Cucumis sativus L. HOM05D005757 ORTHO05D007090 2.3e-22 109.4 94 60.6
Os12g0179800 Oryza sativa ssp. japonica HOM05D005757 ORTHO05D007090 3.1e-22 109.0 87 59.8
Aqoxy6G00314 Aquilegia oxysepala HOM05D005757 ORTHO05D007090 4.0e-22 108.6 92 53.3
PSO541G2210 Papaver somniferum HOM05D005757 ORTHO05D007090 4.0e-22 108.6 97 54.6
ATR0584G010 Amborella trichopoda HOM05D005757 ORTHO05D007090 6.8e-22 107.8 71 69.0
CSS0011153 Camellia sinensis var. sinensis HOM05D005757 ORTHO05D007090 8.9e-22 107.5 92 57.6
Medtr3g096710 Medicago truncatula HOM05D005757 ORTHO05D007090 8.9e-22 107.5 72 69.4
Cfa002199 Carpinus fangiana HOM05D005757 ORTHO05D007090 1.2e-21 107.1 92 57.6
Oeu037858.1 Olea europaea HOM05D005757 ORTHO05D007090 1.2e-21 107.1 92 55.4
Aa31LG3G17760 Aethionema arabicum HOM05D005757 ORTHO05D007090 1.5e-21 106.7 92 53.3
Phvul.009G154300 Phaseolus vulgaris HOM05D005757 ORTHO05D007090 1.5e-21 106.7 102 52.0
VMungo1309G1915 Vigna mungo HOM05D005757 ORTHO05D007090 1.5e-21 106.7 105 52.4
Cc07_g19340 Coffea canephora HOM05D005757 ORTHO05D007090 2.0e-21 106.3 136 44.9
DCAR_009593 Daucus carota HOM05D005757 ORTHO05D007090 2.0e-21 106.3 72 68.1
QL10p041477 Quercus lobata HOM05D005757 ORTHO05D007090 2.0e-21 106.3 72 68.1
TWI75G1840 Tripterygium wilfordii HOM05D005757 ORTHO05D007090 2.0e-21 106.3 85 58.8
Thhalv10013744m.g Eutrema salsugineum HOM05D005757 ORTHO05D007090 2.6e-21 105.9 137 40.9
CANSAT01G1027 Cannabis sativa HOM05D005757 ORTHO05D007090 3.4e-21 105.5 92 55.4
Potri.005G068400 Populus trichocarpa HOM05D005757 ORTHO05D007090 3.4e-21 105.5 74 67.6
Sabra05G0055900 Salix brachista HOM05D005757 ORTHO05D007090 3.4e-21 105.5 76 65.8
HPP92_011392 Vanilla planifolia HOM05D005757 ORTHO05D007090 4.4e-21 105.1 136 44.9
HanXRQChr01g0019111 Helianthus annuus HOM05D005757 ORTHO05D007090 5.8e-21 104.8 85 60.0
Mapoly0093s0042 Marchantia polymorpha HOM05D005757 ORTHO05D007090 5.8e-21 104.8 66 74.2
RcHm_v2.0_Chr2g0122631 Rosa chinensis HOM05D005757 ORTHO05D007090 5.8e-21 104.8 72 68.1
Actinidia16522 Actinidia chinensis HOM05D005757 ORTHO05D007090 7.5e-21 104.4 92 54.3
COL.COLO4_35820 Corchorus olitorius HOM05D005757 ORTHO05D007090 7.5e-21 104.4 72 68.1
THA.LOC104818419 Tarenaya hassleriana HOM05D005757 ORTHO05D007090 7.5e-21 104.4 72 61.1
Gohir.D04G033900 Gossypium hirsutum HOM05D005757 ORTHO05D007090 9.8e-21 104.0 92 54.3
Gorai.012G038200 Gossypium raimondii HOM05D005757 ORTHO05D007090 9.8e-21 104.0 92 54.3
Lj1g0019812 Lotus japonicus HOM05D005757 ORTHO05D007090 9.8e-21 104.0 79 64.6
MD00G1091800 Malus domestica HOM05D005757 ORTHO05D007090 9.8e-21 104.0 92 53.3
QL10p041184 Quercus lobata HOM05D005757 ORTHO05D007090 9.8e-21 104.0 72 66.7
Atru.chr4.999 Acer truncatum HOM05D005757 ORTHO05D007090 1.3e-20 103.6 92 53.3
Manes.12G147700 Manihot esculenta HOM05D005757 ORTHO05D007090 1.3e-20 103.6 93 57.0
Sc16g0009550 Simmondsia chinensis HOM05D005757 ORTHO05D007090 1.3e-20 103.6 78 64.1
Eucgr.I00121 Eucalyptus grandis HOM05D005757 ORTHO05D007090 1.7e-20 103.2 89 55.1
FvH4_1g24990 Fragaria vesca HOM05D005757 ORTHO05D007090 1.7e-20 103.2 72 66.7
FAN19G0175 Fragaria x ananassa HOM05D005757 ORTHO05D007090 1.7e-20 103.2 72 66.7
FAN23G0434 Fragaria x ananassa HOM05D005757 ORTHO05D007090 1.7e-20 103.2 72 66.7
FAN26G2810 Fragaria x ananassa HOM05D005757 ORTHO05D007090 1.7e-20 103.2 72 66.7
AUR62000523 Chenopodium quinoa HOM05D005757 ORTHO05D007090 2.2e-20 102.8 65 69.2
AUR62006868 Chenopodium quinoa HOM05D005757 ORTHO05D007090 2.2e-20 102.8 65 69.2
ECA248G3451 Erigeron canadensis HOM05D005757 ORTHO05D007090 2.2e-20 102.8 85 58.8
Glyma.04G210000 Glycine max HOM05D005757 ORTHO05D007090 2.2e-20 102.8 92 54.3
Ciclev10001356m.g Citrus clementina HOM05D005757 ORTHO05D007090 2.9e-20 102.4 88 58.0
Lj7C583G3 Lonicera japonica HOM05D005757 ORTHO05D007090 2.9e-20 102.4 86 58.1
Prupe.4G275900 Prunus persica HOM05D005757 ORTHO05D007090 2.9e-20 102.4 78 64.1
Glyma.06G156000 Glycine max HOM05D005757 ORTHO05D007090 3.7e-20 102.1 92 54.3
Lsat_1_v5_gn_7_106341 Lactuca sativa HOM05D005757 ORTHO05D007090 3.7e-20 102.1 72 66.7
Lalb_Chr11g0068621 Lupinus albus HOM05D005757 ORTHO05D007090 3.7e-20 102.1 85 56.5
QL10p041201 Quercus lobata HOM05D005757 ORTHO05D007090 3.7e-20 102.1 92 53.3
GSVIVG01022342001 Vitis vinifera HOM05D005757 ORTHO05D007090 3.7e-20 102.1 85 56.5
Zm00001eb408300 Zea mays HOM05D005757 ORTHO05D007090 3.7e-20 102.1 80 57.5
PGR119G2343 Punica granatum HOM05D005757 ORTHO05D007090 4.9e-20 101.7 71 63.4
Gohir.A05G381400 Gossypium hirsutum HOM05D005757 ORTHO05D007090 6.4e-20 101.3 92 53.3
Psat5g060320 Pisum sativum HOM05D005757 ORTHO05D007090 6.4e-20 101.3 81 58.0
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 8.3e-20 100.9 105 54.3
FAN28G1123 Fragaria x ananassa HOM05D005757 ORTHO05D007090 8.3e-20 100.9 72 65.3
Manes.12G159200 Manihot esculenta HOM05D005757 ORTHO05D007090 8.3e-20 100.9 94 55.3
TPR.G33548 Trifolium pratense HOM05D005757 ORTHO05D007090 8.3e-20 100.9 71 64.8
CiPaw.04G079300 Carya illinoinensis HOM05D005757 ORTHO05D007090 1.4e-19 100.1 92 54.3
Sp6g34070 Schrenkiella parvula HOM05D005757 ORTHO05D007090 2.4e-19 99.4 85 52.9
MSTRG.23485 Avicennia marina HOM05D005757 ORTHO05D007090 3.2e-19 99.0 71 64.8
BcaC03g13245 Brassica carinata HOM05D005757 ORTHO05D007090 4.1e-19 98.6 85 54.1
C02p03770 Brassica napus HOM05D005757 ORTHO05D007090 4.1e-19 98.6 85 54.1
BolC2t06338H Brassica oleracea HOM05D005757 ORTHO05D007090 4.1e-19 98.6 85 54.1
BraA02t04972Z Brassica rapa HOM05D005757 ORTHO05D007090 4.1e-19 98.6 85 54.1
Pp3c16_14390 Physcomitrium patens HOM05D005757 ORTHO05D007090 4.1e-19 98.6 60 73.3
CDE08G1654 Ceratophyllum demersum HOM05D005757 ORTHO05D007090 9.2e-19 97.4 64 67.2
AT5G09230 Arabidopsis thaliana HOM05D005757 ORTHO05D007090 1.2e-18 97.1 85 51.8
Migut.H00828 Erythranthe guttata HOM05D005757 ORTHO05D007090 1.2e-18 97.1 72 63.9
Peaxi162Scf00842g00217 Petunia axillaris HOM05D005757 ORTHO05D007090 1.6e-18 96.7 66 68.2
Hund07233 Selenicereus undatus HOM05D005757 ORTHO05D007090 1.6e-18 96.7 86 53.5
unitig_52.g17615 Utricularia gibba HOM05D005757 ORTHO05D007090 1.6e-18 96.7 83 55.4
CARHR204190 Cardamine hirsuta HOM05D005757 ORTHO05D007090 2.1e-18 96.3 85 52.9
Cpa.g.sc37.11 Carica papaya HOM05D005757 ORTHO05D007090 2.1e-18 96.3 92 52.2
Nitab4.5_0010993g0010 Nicotiana tabacum HOM05D005757 ORTHO05D007090 2.1e-18 96.3 65 70.8
AL6G19620 Arabidopsis lyrata HOM05D005757 ORTHO05D007090 2.7e-18 95.9 85 52.9
CAN.G186.1 Capsicum annuum HOM05D005757 ORTHO05D007090 2.7e-18 95.9 117 47.9
PGSC0003DMG400032556 Solanum tuberosum HOM05D005757 ORTHO05D007090 2.7e-18 95.9 80 61.2
Solyc04g009430.3 Solanum lycopersicum HOM05D005757 ORTHO05D007090 3.5e-18 95.5 65 69.2
Sopen04g004560 Solanum pennellii HOM05D005757 ORTHO05D007090 3.5e-18 95.5 65 69.2
BcaB05g21563 Brassica carinata HOM05D005757 ORTHO05D007090 4.6e-18 95.1 85 52.9
Carub.0006s0779 Capsella rubella HOM05D005757 ORTHO05D007090 4.6e-18 95.1 85 52.9
SMO115G0270 Selaginella moellendorffii HOM05D005757 ORTHO05D007090 3.9e-17 92.0 74 59.5
arahy.Tifrunner.gnm1.ann1.X6R2FG Arachis hypogaea HOM05D005757 ORTHO05D007090 5.0e-17 91.7 106 47.2
arahy.Tifrunner.gnm1.ann1.5W1UEZ Arachis hypogaea HOM05D005757 ORTHO05D007090 6.6e-17 91.3 94 50.0
Thecc.01G137800 Theobroma cacao HOM05D005757 ORTHO05D007090 6.6e-17 91.3 67 64.2
MBI03_g28480_MAGBIO Magnolia biondii HOM05D005757 ORTHO05D007090 1.5e-16 90.1 150 39.3
ECA248G1240 Erigeron canadensis HOM05D005757 ORTHO05D007090 4.3e-16 88.6 62 62.9
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 1.2e-15 87.0 89 50.6
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 1.2e-15 87.0 65 60.0
Nitab4.5_0004105g0030 Nicotiana tabacum HOM05D005757 ORTHO05D007090 4.0e-14 82.0 65 66.2
EL10Ac4g09631 Beta vulgaris HOM05D005757 ORTHO05D007090 2.2e-12 76.3 50 68.0
MCO15G064 Micromonas commoda HOM05D005757 ORTHO05D007090 2.2e-12 76.3 59 57.6
Cre12.g524650 Chlamydomonas reinhardtii HOM05D005757 ORTHO05D007090 8.3e-12 74.3 54 63.0
Ca_16985_v3 Cicer arietinum L. HOM05D005757 ORTHO05D007090 1.1e-11 73.9 45 75.6
QL05p089323 Quercus lobata HOM05D005757 ORTHO05D007090 4.1e-11 72.0 43 76.7
Eucgr.I00120 Eucalyptus grandis HOM05D005757 ORTHO05D007090 7.1e-11 71.2 65 58.5
SGA_v2.0_scaffold20G08952 Striga asiatica HOM05D005757 ORTHO05D007090 1.6e-10 70.1 86 43.0
PSO675G6061 Papaver somniferum HOM05D005757 ORTHO05D007090 5.1e-09 65.1 112 33.9


User provided reference genes

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