Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00006 Sequoiadendron giganteum HOM05D006514 ORTHO05D008138 4.2e-49 197.6 93 100.0
QL12p026537 Quercus lobata HOM05D006514 ORTHO05D008138 4.7e-16 87.8 55 70.9
QL12p026562 Quercus lobata HOM05D006514 ORTHO05D008138 4.7e-16 87.8 55 70.9
RcHm_v2.0_Chr5g0070251 Rosa chinensis HOM05D006514 ORTHO05D008138 1.4e-15 86.3 53 69.8
Dinv36061 Davidia involucrata HOM05D006514 ORTHO05D008138 2.4e-15 85.5 53 71.7
CiPaw.07G206900 Carya illinoinensis HOM05D006514 ORTHO05D008138 8.9e-15 83.6 55 70.9
PSO017G0544 Papaver somniferum HOM05D006514 ORTHO05D008138 8.9e-15 83.6 50 78.0
MD11G1070700 Malus domestica HOM05D006514 ORTHO05D008138 1.2e-14 83.2 55 69.1
Manes.05G162000 Manihot esculenta HOM05D006514 ORTHO05D008138 1.5e-14 82.8 53 69.8
RcHm_v2.0_Chr7g0176991 Rosa chinensis HOM05D006514 ORTHO05D008138 2.6e-14 82.0 53 67.9
CiPaw.13G075100 Carya illinoinensis HOM05D006514 ORTHO05D008138 4.4e-14 81.3 53 67.9
CsaV3_5G038690 Cucumis sativus L. HOM05D006514 ORTHO05D008138 4.4e-14 81.3 57 63.2
MD03G1065900 Malus domestica HOM05D006514 ORTHO05D008138 4.4e-14 81.3 54 66.7
Nn1g05070 Nelumbo nucifera HOM05D006514 ORTHO05D008138 4.4e-14 81.3 46 82.6
Prupe.6G054600 Prunus persica HOM05D006514 ORTHO05D008138 4.4e-14 81.3 50 72.0
Hma1.2p1_0203F.1_g086530 Hydrangea macrophylla HOM05D006514 ORTHO05D008138 5.8e-14 80.9 50 74.0
Sed0005431 Sechium edule HOM05D006514 ORTHO05D008138 7.6e-14 80.5 53 67.9
A04p23650 Brassica napus HOM05D006514 ORTHO05D008138 1.7e-13 79.3 50 68.0
BraA04t17890Z Brassica rapa HOM05D006514 ORTHO05D008138 1.7e-13 79.3 50 68.0
Gohir.D02G094200 Gossypium hirsutum HOM05D006514 ORTHO05D008138 1.7e-13 79.3 50 72.0
Gorai.005G107100 Gossypium raimondii HOM05D006514 ORTHO05D008138 1.7e-13 79.3 50 72.0
GSVIVG01037960001 Vitis vinifera HOM05D006514 ORTHO05D008138 2.2e-13 79.0 53 67.9
AL4G25910 Arabidopsis lyrata HOM05D006514 ORTHO05D008138 2.9e-13 78.6 50 70.0
Carub.0004s1216 Capsella rubella HOM05D006514 ORTHO05D008138 2.9e-13 78.6 50 70.0
FAN16G2060 Fragaria x ananassa HOM05D006514 ORTHO05D008138 2.9e-13 78.6 50 70.0
Gohir.A03G078101 Gossypium hirsutum HOM05D006514 ORTHO05D008138 2.9e-13 78.6 50 70.0
BcaB06g28396 Brassica carinata HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 68.0
BcaB06g28465 Brassica carinata HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 68.0
C04p60100 Brassica napus HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 68.0
BolC4t27513H Brassica oleracea HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 68.0
CAN.G358.121 Capsicum annuum HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 70.0
Migut.N00499 Erythranthe guttata HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 70.0
FvH4_3g38980 Fragaria vesca HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 70.0
FAN21G1628 Fragaria x ananassa HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 70.0
Potri.002G263100 Populus trichocarpa HOM05D006514 ORTHO05D008138 3.8e-13 78.2 50 70.0
THA.LOC104800827 Tarenaya hassleriana HOM05D006514 ORTHO05D008138 3.8e-13 78.2 54 68.5
AT2G30942 Arabidopsis thaliana HOM05D006514 ORTHO05D008138 4.9e-13 77.8 50 68.0
Duzib041G0253 Durio zibethinus HOM05D006514 ORTHO05D008138 4.9e-13 77.8 50 68.0
Duzib093G1568 Durio zibethinus HOM05D000207 ORTHO05D001482 4.9e-13 77.8 61 62.3
Hma1.2p1_0023F.1_g014910 Hydrangea macrophylla HOM05D006514 ORTHO05D008138 4.9e-13 77.8 50 70.0
CARHR006120 Cardamine hirsuta HOM05D006514 ORTHO05D008138 6.4e-13 77.4 50 68.0
PGR004G0716 Punica granatum HOM05D006514 ORTHO05D008138 6.4e-13 77.4 53 66.0
PSO801G0156 Papaver somniferum HOM05D006514 ORTHO05D008138 8.4e-13 77.0 46 76.1
Potri.002G263300 Populus trichocarpa HOM05D006514 ORTHO05D008138 8.4e-13 77.0 53 64.2
SalBow8G0801 Salvia bowleyana HOM05D006514 ORTHO05D008138 8.4e-13 77.0 50 68.0
BcaB02g06800 Brassica carinata HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
BcaC07g42061 Brassica carinata HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
A09p66940 Brassica napus HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
A10p05150 Brassica napus HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
C05p04760 Brassica napus HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
C08p51170 Brassica napus HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
BolC5t29247H Brassica oleracea HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
BolC8t52644H Brassica oleracea HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
BraA09t42029Z Brassica rapa HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
BraA10t42782Z Brassica rapa HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 66.0
Cc10_g03090 Coffea canephora HOM05D006514 ORTHO05D008138 1.1e-12 76.6 50 72.0
PGSC0003DMG400015499 Solanum tuberosum HOM05D006514 ORTHO05D008138 1.1e-12 76.6 53 64.2
Thhalv10009956m.g Eutrema salsugineum HOM05D006514 ORTHO05D008138 1.4e-12 76.3 50 66.0
THA.LOC104815841 Tarenaya hassleriana HOM05D006514 ORTHO05D008138 1.4e-12 76.3 50 66.0
TWI12G0206 Tripterygium wilfordii HOM05D006514 ORTHO05D008138 1.4e-12 76.3 53 66.0
AL1G16530 Arabidopsis lyrata HOM05D006514 ORTHO05D008138 1.9e-12 75.9 50 64.0
AT1G06515 Arabidopsis thaliana HOM05D006514 ORTHO05D008138 1.9e-12 75.9 50 64.0
Carub.0001s0587 Capsella rubella HOM05D006514 ORTHO05D008138 1.9e-12 75.9 50 64.0
Migut.H00182 Erythranthe guttata HOM05D006514 ORTHO05D008138 1.9e-12 75.9 56 57.1
Thecc.08G024100 Theobroma cacao HOM05D006514 ORTHO05D008138 1.9e-12 75.9 50 68.0
Duzib116G0168 Durio zibethinus HOM05D006514 ORTHO05D008138 2.4e-12 75.5 50 68.0
Oeu025460.1 Olea europaea HOM05D006514 ORTHO05D008138 2.4e-12 75.5 50 68.0
PSO339G3417 Papaver somniferum HOM05D006514 ORTHO05D008138 2.4e-12 75.5 46 73.9
MSTRG.24295 Avicennia marina HOM05D006514 ORTHO05D008138 3.2e-12 75.1 56 58.9
CSS0043768 Camellia sinensis var. sinensis HOM05D006514 ORTHO05D008138 4.2e-12 74.7 53 62.3
DCAR_025932 Daucus carota HOM05D006514 ORTHO05D008138 4.2e-12 74.7 43 76.7
Oeu009866.1 Olea europaea HOM05D006514 ORTHO05D008138 4.2e-12 74.7 50 68.0
TAR628G0909 Trochodendron aralioides HOM05D006514 ORTHO05D008138 5.4e-12 74.3 43 76.7
unitig_85.g27236 Utricularia gibba HOM05D006514 ORTHO05D008138 5.4e-12 74.3 50 66.0
Ciclev10023245m.g Citrus clementina HOM05D006514 ORTHO05D008138 7.1e-12 73.9 50 64.0
SHI24607 Sapria himalayana HOM05D006514 ORTHO05D008138 7.1e-12 73.9 49 67.3
TWI36G0631 Tripterygium wilfordii HOM05D006514 ORTHO05D008138 9.3e-12 73.6 50 70.0
Potri.001G000400 Populus trichocarpa HOM05D006514 ORTHO05D008138 1.2e-11 73.2 50 66.0
Eucgr.F04183 Eucalyptus grandis HOM05D006514 ORTHO05D008138 1.6e-11 72.8 51 64.7
Rhsim08G0113100 Rhododendron simsii HOM05D006514 ORTHO05D008138 2.1e-11 72.4 49 67.3
CANSAT01G0756 Cannabis sativa HOM05D006514 ORTHO05D008138 2.7e-11 72.0 42 76.2
vmacro17857 Vaccinium macrocarpon HOM05D006514 ORTHO05D008138 4.6e-11 71.2 52 65.4
CARHR124460 Cardamine hirsuta HOM05D006514 ORTHO05D008138 1.3e-10 69.7 54 59.3
Cc07_g09230 Coffea canephora HOM05D006514 ORTHO05D008138 1.3e-10 69.7 49 63.3
Gohir.A01G116600 Gossypium hirsutum HOM05D006514 ORTHO05D008138 3.9e-10 68.2 49 63.3
Gohir.D01G105000 Gossypium hirsutum HOM05D006514 ORTHO05D008138 3.9e-10 68.2 49 63.3
Gorai.002G129000 Gossypium raimondii HOM05D006514 ORTHO05D008138 3.9e-10 68.2 49 63.3
Glyma.05G140300 Glycine max HOM05D006514 ORTHO05D008138 5.1e-10 67.8 53 58.5
Glyma.08G095700 Glycine max HOM05D006514 ORTHO05D008138 6.6e-10 67.4 53 56.6
Zm00001eb368290 Zea mays HOM05D006514 ORTHO05D008138 8.7e-10 67.0 46 60.9
CDE04G3777 Ceratophyllum demersum HOM05D006514 ORTHO05D008138 1.9e-09 65.9 39 79.5
Phvul.002G183600 Phaseolus vulgaris HOM05D006514 ORTHO05D008138 5.6e-09 64.3 43 67.4
FAN11G3963 Fragaria x ananassa HOM05D006514 ORTHO05D008138 1.3e-08 63.2 50 60.0
Lalb_Chr11g0074141 Lupinus albus HOM05D006514 ORTHO05D008138 1.3e-08 63.2 53 58.5
Lalb_Chr13g0293771 Lupinus albus HOM05D006514 ORTHO05D008138 1.3e-08 63.2 43 67.4
Os07g0446900 Oryza sativa ssp. japonica HOM05D006514 ORTHO05D008138 2.8e-08 62.0 44 63.6
Lj4g0001345 Lotus japonicus HOM05D006514 ORTHO05D008138 4.8e-08 61.2 53 52.8
Ca_07248_v3 Cicer arietinum L. HOM05D006514 ORTHO05D008138 1.4e-07 59.7 43 60.5
FAN16G1919 Fragaria x ananassa HOM05D006514 ORTHO05D008138 1.8e-07 59.3 66 43.9
arahy.Tifrunner.gnm1.ann1.4217G9 Arachis hypogaea HOM05D006514 ORTHO05D008138 3.1e-07 58.5 53 54.7
ATR0733G176 Amborella trichopoda HOM05D006514 ORTHO05D008138 4.0e-07 58.2 41 68.3
AagrBONN_evm.TU.Sc2ySwM_228.3660 Anthoceros agrestis HOM05D006514 ORTHO05D008138 4.0e-07 58.2 63 47.6
arahy.Tifrunner.gnm1.ann1.0361F1 Arachis hypogaea HOM05D006514 ORTHO05D008138 4.0e-07 58.2 53 52.8
arahy.Tifrunner.gnm1.ann1.TUTF01 Arachis hypogaea HOM05D006514 ORTHO05D008138 4.0e-07 58.2 53 52.8
FAN11G3335 Fragaria x ananassa HOM05D006514 ORTHO05D008138 4.0e-07 58.2 42 64.3
arahy.Tifrunner.gnm1.ann1.40255N Arachis hypogaea HOM05D006514 ORTHO05D008138 5.3e-07 57.8 53 52.8
Aa31LG1G7590 Aethionema arabicum HOM05D006514 ORTHO05D008138 9.0e-07 57.0 84 39.3
FAN25G0650 Fragaria x ananassa HOM05D006514 ORTHO05D008138 9.0e-07 57.0 28 82.1
Lalb_Chr08g0232711 Lupinus albus HOM05D006514 ORTHO05D008138 2.0e-06 55.8 33 75.8
Os04g0518650 Oryza sativa ssp. japonica HOM05D006514 ORTHO05D008138 2.0e-06 55.8 52 51.9
Pp3c10_13010 Physcomitrium patens HOM05D006514 ORTHO05D008138 2.0e-06 55.8 51 45.1
Zm00001eb096700 Zea mays HOM05D007724 ORTHO05D009363 3.4e-06 55.1 42 59.5
Pp3c4_25750 Physcomitrium patens HOM05D006514 ORTHO05D008138 4.4e-06 54.7 47 46.8
Ah.06g182360 Amaranthus hybridus HOM05D006514 ORTHO05D008138 5.8e-06 54.3 35 71.4
CSS0047171 Camellia sinensis var. sinensis HOM05D006514 ORTHO05D008138 9.9e-06 53.5 35 65.7


User provided reference genes

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