Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 1.1e-173 613.2 329 100.0
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 5.0e-153 544.7 329 92.7
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 3.5e-29 133.3 382 37.7
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 4.7e-26 122.9 387 36.7
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 7.5e-24 115.5 343 35.6
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 9.8e-24 115.2 344 35.5
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 2.7e-21 107.1 343 32.1
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 1.2e-16 91.7 317 35.3
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 5.8e-16 89.4 330 34.5
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 3.7e-15 86.7 374 31.0
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 4.9e-15 86.3 339 33.0
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 6.4e-15 85.9 327 32.4
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 9.2e-14 82.0 319 29.8
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 2.1e-13 80.9 363 32.2
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 2.7e-13 80.5 347 30.3
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 3.5e-13 80.1 343 31.8
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 6.6e-12 75.9 269 30.5
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 2.5e-11 73.9 286 30.4
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 3.3e-11 73.6 286 30.4
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 7.3e-11 72.4 286 29.7
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.6e-10 71.2 355 28.2
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 2.8e-10 70.5 324 32.1
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 4.7e-10 69.7 273 29.3
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 1.4e-09 68.2 358 28.5
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 2.6e-08 63.9 366 30.9
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 2.6e-08 63.9 334 32.3
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 5.8e-08 62.8 298 28.2
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 7.5e-08 62.4 353 30.0
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 9.9e-08 62.0 326 31.0
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 4.9e-07 59.7 348 29.0
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 1.4e-06 58.2 245 30.2
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 1.9e-06 57.8 314 26.1
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 3.2e-06 57.0 281 28.5
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 7.1e-06 55.8 259 26.6


User provided reference genes

Program Settings