Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0235000 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.1e-64 246.9 123 100.0
Rhsim12G0212200 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.1e-63 245.0 122 99.2
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-39 166.4 177 54.8
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.7e-26 120.9 145 52.4
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 2.8e-24 115.5 89 55.1
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.7e-24 115.2 127 45.7
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-23 113.6 89 60.7
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-23 113.6 88 61.4
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-23 113.2 89 55.1
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-23 113.2 89 55.1
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.1e-23 112.1 88 61.4
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.1e-23 111.7 88 60.2
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.1e-23 111.7 89 59.6
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.3e-23 111.3 89 52.8
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-23 111.3 122 49.2
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.9e-23 110.9 89 59.6
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-22 109.8 89 53.9
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-22 109.0 87 59.8
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-21 107.1 87 58.6
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-19 99.4 89 53.9
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-19 99.4 89 53.9
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-19 99.4 89 53.9
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-19 99.4 89 53.9
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-19 99.4 89 53.9
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-19 99.4 89 53.9
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-19 99.4 89 53.9
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-18 96.3 87 48.3
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-18 95.9 86 48.8
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-18 95.9 86 48.8
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-18 95.9 86 48.8
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-18 95.9 86 48.8
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-18 95.9 86 48.8
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-18 95.9 86 48.8
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-18 95.9 86 48.8
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-18 95.9 86 48.8
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.0e-18 95.5 89 50.6
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.9e-18 95.1 89 51.7
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 6.7e-18 94.4 89 48.3
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.7e-18 94.4 86 48.8
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.7e-18 94.4 139 46.0
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-17 93.6 89 50.6
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-17 92.0 86 47.7
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.7e-17 90.5 86 46.5
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.7e-16 88.6 77 55.8
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-12 76.6 60 53.3
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 2.7e-11 72.4 88 39.8
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 3.6e-11 72.0 88 37.5
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 6.1e-11 71.2 89 37.1
vmacro12525 Vaccinium macrocarpon HOM05D007798 ORTHO05D009882 3.9e-10 68.6 71 46.5
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 6.7e-10 67.8 78 38.5
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 1.1e-09 67.0 89 34.8
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 2.0e-09 66.2 74 40.5
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 5.7e-09 64.7 82 39.0
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.8e-08 62.4 63 44.4
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-07 60.1 45 60.0
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.0e-06 56.2 58 46.6
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.6e-06 55.8 49 53.1


User provided reference genes

Program Settings