Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0225900 Rhododendron simsii HOM05D001062 ORTHO05D012333 5.6e-101 370.9 187 100.0
RhsimUnG0227000 Rhododendron simsii HOM05D001062 ORTHO05D000884 1.2e-74 283.5 162 88.3
Rhsim03G0021600 Rhododendron simsii HOM05D001062 ORTHO05D000884 1.3e-49 200.3 172 64.5
Rhsim03G0022000 Rhododendron simsii HOM05D001062 ORTHO05D000884 8.3e-44 181.0 166 63.9
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.8e-21 105.1 112 54.5
Dinv09059 Davidia involucrata HOM05D001062 ORTHO05D000884 1.4e-19 100.5 212 38.2
Rhsim03G0075600 Rhododendron simsii HOM05D001062 ORTHO05D000884 4.6e-18 95.5 211 39.3
Cc09_g05850 Coffea canephora HOM05D001062 ORTHO05D000884 1.3e-17 94.0 195 38.5
CSS0030846 Camellia sinensis var. sinensis HOM05D001062 ORTHO05D000884 3.0e-17 92.8 211 38.4
DCAR_003773 Daucus carota HOM05D001062 ORTHO05D000884 3.0e-17 92.8 201 39.3
HanXRQChr12g0381561 Helianthus annuus HOM05D001062 ORTHO05D000884 5.1e-17 92.0 190 39.5
Oeu058936.1 Olea europaea HOM05D001062 ORTHO05D000884 1.1e-16 90.9 198 41.4
Lsat_1_v5_gn_3_107201 Lactuca sativa HOM05D001062 ORTHO05D000884 1.9e-16 90.1 191 42.4
Nitab4.5_0010569g0010 Nicotiana tabacum HOM05D001062 ORTHO05D000884 7.3e-16 88.2 195 37.9
Nitab4.5_0000138g0060 Nicotiana tabacum HOM05D001062 ORTHO05D000884 1.2e-15 87.4 195 37.4
Oeu056042.1 Olea europaea HOM05D001062 ORTHO05D000884 1.2e-15 87.4 197 38.1
CANSAT64G1264 Cannabis sativa HOM05D001062 ORTHO05D000884 1.6e-15 87.0 191 38.2
MSTRG.16359 Avicennia marina HOM05D001062 ORTHO05D000884 2.1e-15 86.7 206 39.3
FAN21G1983 Fragaria x ananassa HOM05D001062 ORTHO05D000884 2.1e-15 86.7 194 39.7
FAN25G0928 Fragaria x ananassa HOM05D001062 ORTHO05D000884 2.1e-15 86.7 194 39.7
MELO3C002411.2 Cucumis melo HOM05D001062 ORTHO05D000884 2.8e-15 86.3 189 38.6
FvH4_3g12480 Fragaria vesca HOM05D001062 ORTHO05D000884 2.8e-15 86.3 194 39.7
Solyc02g031830.1 Solanum lycopersicum HOM05D001062 ORTHO05D000884 2.8e-15 86.3 195 37.4
Sopen02g010120 Solanum pennellii HOM05D001062 ORTHO05D000884 2.8e-15 86.3 195 37.4
CSS0000691 Camellia sinensis var. sinensis HOM05D001062 ORTHO05D000884 3.6e-15 85.9 188 37.8
CsaV3_1G010230 Cucumis sativus L. HOM05D001062 ORTHO05D000884 3.6e-15 85.9 189 38.6
Rhsim07G0167100 Rhododendron simsii HOM05D001062 ORTHO05D339817 3.6e-15 85.9 101 49.5
SGA_v2.0_scaffold175G39354 Striga asiatica HOM05D001062 ORTHO05D000884 3.6e-15 85.9 196 36.7
PGSC0003DMG400017863 Solanum tuberosum HOM05D001062 ORTHO05D000884 4.7e-15 85.5 195 37.4
SGA_v2.0_scaffold298G47690 Striga asiatica HOM05D001062 ORTHO05D000884 6.2e-15 85.1 188 39.4
Lj2P345T17 Lonicera japonica HOM05D001062 ORTHO05D000884 8.1e-15 84.7 188 39.4
ClCG03G004280 Citrullus lanatus HOM05D001062 ORTHO05D000884 1.4e-14 84.0 189 38.6
Rhsim06G0010100 Rhododendron simsii HOM05D001062 ORTHO05D000884 1.4e-14 84.0 172 41.3
Lj4g0011148 Lotus japonicus HOM05D001062 ORTHO05D000884 1.8e-14 83.6 216 35.2
Phvul.002G191400 Phaseolus vulgaris HOM05D001062 ORTHO05D000884 1.8e-14 83.6 189 38.6
Prupe.4G113700 Prunus persica HOM05D001062 ORTHO05D000884 1.8e-14 83.6 197 39.1
Migut.M01989 Erythranthe guttata HOM05D001062 ORTHO05D000884 3.1e-14 82.8 214 38.3
Medtr7g021620 Medicago truncatula HOM05D001062 ORTHO05D000884 3.1e-14 82.8 189 38.6
Sed0024381 Sechium edule HOM05D001062 ORTHO05D000884 3.1e-14 82.8 191 38.7
RcHm_v2.0_Chr5g0020421 Rosa chinensis HOM05D001062 ORTHO05D000884 5.2e-14 82.0 197 39.1
TAR626G0745 Trochodendron aralioides HOM05D001062 ORTHO05D000884 5.2e-14 82.0 212 36.8
QL11p013748 Quercus lobata HOM05D001062 ORTHO05D000884 6.8e-14 81.6 192 39.1
Cpa.g.sc30.143 Carica papaya HOM05D001062 ORTHO05D000884 8.9e-14 81.3 192 39.1
Glyma.05G131300 Glycine max HOM05D001062 ORTHO05D000884 1.2e-13 80.9 189 38.1
Medtr4g096890 Medicago truncatula HOM05D001062 ORTHO05D000884 1.2e-13 80.9 189 38.1
TAR624G0548 Trochodendron aralioides HOM05D001062 ORTHO05D000884 1.2e-13 80.9 189 39.2
CARHR226710 Cardamine hirsuta HOM05D001062 ORTHO05D000884 1.5e-13 80.5 189 38.1
TPR.G27890 Trifolium pratense HOM05D001062 ORTHO05D000884 2.0e-13 80.1 189 38.1
AT4G19950 Arabidopsis thaliana HOM05D001062 ORTHO05D000884 2.6e-13 79.7 188 37.8
Nitab4.5_0007933g0010 Nicotiana tabacum HOM05D001062 ORTHO05D000884 2.6e-13 79.7 188 37.2
Gorai.005G267600 Gossypium raimondii HOM05D001062 ORTHO05D000884 3.4e-13 79.3 192 39.1
THA.LOC104806216 Tarenaya hassleriana HOM05D001062 ORTHO05D000884 3.4e-13 79.3 196 36.2
TWI38G2206 Tripterygium wilfordii HOM05D001062 ORTHO05D000884 4.4e-13 79.0 208 37.0
Cfa000695 Carpinus fangiana HOM05D001062 ORTHO05D000884 5.8e-13 78.6 190 37.9
Thhalv10026779m.g Eutrema salsugineum HOM05D001062 ORTHO05D000884 5.8e-13 78.6 189 37.0
PGR031G2520 Punica granatum HOM05D001062 ORTHO05D000884 5.8e-13 78.6 189 37.0
Sc17g0004270 Simmondsia chinensis HOM05D001062 ORTHO05D000884 7.6e-13 78.2 214 36.0
Gohir.D02G239300 Gossypium hirsutum HOM05D001062 ORTHO05D000884 9.9e-13 77.8 192 38.5
Lj1P1146T20 Lonicera japonica HOM05D001062 ORTHO05D000884 9.9e-13 77.8 204 38.2
Sp2g09690 Schrenkiella parvula HOM05D001062 ORTHO05D000884 9.9e-13 77.8 191 37.7
Carub.0008s0339 Capsella rubella HOM05D001062 ORTHO05D000884 1.3e-12 77.4 189 36.5
THA.LOC104811630 Tarenaya hassleriana HOM05D001062 ORTHO05D000884 1.3e-12 77.4 190 37.9
unitig_92.g28189 Utricularia gibba HOM05D001062 ORTHO05D000884 1.3e-12 77.4 188 36.2
CARHR177950 Cardamine hirsuta HOM05D001062 ORTHO05D000884 2.2e-12 76.6 189 36.5
Duzib132G1009 Durio zibethinus HOM05D001062 ORTHO05D000884 2.2e-12 76.6 192 37.5
BcaC06g31581 Brassica carinata HOM05D001062 ORTHO05D000884 2.9e-12 76.3 188 36.7
BcaNung01742 Brassica carinata HOM05D001062 ORTHO05D000884 2.9e-12 76.3 215 34.9
Carub.0007s2120 Capsella rubella HOM05D001062 ORTHO05D000884 2.9e-12 76.3 189 37.6
Haze_06094 Corylus avellana HOM05D001062 ORTHO05D000884 2.9e-12 76.3 190 36.8
A06p46830 Brassica napus HOM05D001062 ORTHO05D000884 3.7e-12 75.9 191 37.2
BraA06t27555Z Brassica rapa HOM05D001062 ORTHO05D000884 3.7e-12 75.9 191 37.2
Nitab4.5_0001476g0080 Nicotiana tabacum HOM05D001062 ORTHO05D000884 3.7e-12 75.9 188 36.7
Nn7g38231 Nelumbo nucifera HOM05D001062 ORTHO05D000884 4.9e-12 75.5 216 34.3
Potri.015G125600 Populus trichocarpa HOM05D001062 ORTHO05D000884 4.9e-12 75.5 189 39.2
CAN.G79.43 Capsicum annuum HOM05D001062 ORTHO05D000884 6.4e-12 75.1 195 36.4
Aa31LG6G2370 Aethionema arabicum HOM05D001062 ORTHO05D000884 8.4e-12 74.7 189 37.6
BcaC06g34497 Brassica carinata HOM05D001062 ORTHO05D000884 8.4e-12 74.7 191 36.6
C07p27860 Brassica napus HOM05D001062 ORTHO05D000884 8.4e-12 74.7 191 36.6
BolC7t43317H Brassica oleracea HOM05D001062 ORTHO05D000884 8.4e-12 74.7 191 36.6
CiPaw.09G075600 Carya illinoinensis HOM05D001062 ORTHO05D000884 8.4e-12 74.7 196 39.3
Potri.012G125800 Populus trichocarpa HOM05D001062 ORTHO05D000884 8.4e-12 74.7 189 38.1
COL.COLO4_07172 Corchorus olitorius HOM05D001062 ORTHO05D000884 1.1e-11 74.3 190 37.4
Peaxi162Scf01110g00025 Petunia axillaris HOM05D001062 ORTHO05D000884 1.1e-11 74.3 190 36.8
AL8G14610 Arabidopsis lyrata HOM05D001062 ORTHO05D000884 1.9e-11 73.6 189 36.0
AL8G14640 Arabidopsis lyrata HOM05D001062 ORTHO05D000884 1.9e-11 73.6 189 36.0
AT5G44860 Arabidopsis thaliana HOM05D001062 ORTHO05D000884 1.9e-11 73.6 189 36.0
Rhsim03G0023500 Rhododendron simsii HOM05D001129 ORTHO05D012333 1.9e-11 73.6 81 49.4
Sopen01g032500 Solanum pennellii HOM05D001062 ORTHO05D000884 1.9e-11 73.6 190 36.8
Manes.16G055300 Manihot esculenta HOM05D001062 ORTHO05D000884 3.2e-11 72.8 195 36.4
Solyc01g080910.2 Solanum lycopersicum HOM05D001062 ORTHO05D000884 3.2e-11 72.8 190 36.8
MSTRG.7598 Avicennia marina HOM05D001062 ORTHO05D000884 5.4e-11 72.0 191 36.6
Psat7g089240 Pisum sativum HOM05D001062 ORTHO05D000884 5.4e-11 72.0 187 36.4
Rhsim03G0023100 Rhododendron simsii HOM05D013372 ORTHO05D340306 5.4e-11 72.0 63 60.3
Lalb_Chr13g0292271 Lupinus albus HOM05D001062 ORTHO05D000884 7.1e-11 71.6 195 32.8
CAN.G1551.4 Capsicum annuum HOM05D001062 ORTHO05D000884 9.2e-11 71.2 188 37.8
Thhalv10001106m.g Eutrema salsugineum HOM05D001062 ORTHO05D000884 9.2e-11 71.2 191 35.1
BcaB07g32772 Brassica carinata HOM05D001062 ORTHO05D000884 1.2e-10 70.9 204 34.3
Sabra15G0139900 Salix brachista HOM05D001062 ORTHO05D000884 1.2e-10 70.9 216 34.3
Thecc.02G007900 Theobroma cacao HOM05D001062 ORTHO05D000884 1.2e-10 70.9 192 36.5
PGSC0003DMG400001822 Solanum tuberosum HOM05D001062 ORTHO05D000884 2.7e-10 69.7 190 35.8
GSVIVG01012111001 Vitis vinifera HOM05D001062 ORTHO05D000884 2.7e-10 69.7 212 34.4
Ah.08g212850 Amaranthus hybridus HOM05D001062 ORTHO05D000884 4.6e-10 68.9 189 37.0
Carub.0001s2953 Capsella rubella HOM05D001062 ORTHO05D000884 6.0e-10 68.6 191 36.1
Peaxi162Scf00198g00075 Petunia axillaris HOM05D001062 ORTHO05D000884 1.0e-09 67.8 173 35.3
Aa31LG9G8320 Aethionema arabicum HOM05D001062 ORTHO05D000884 1.7e-09 67.0 189 35.4
CARHR030610 Cardamine hirsuta HOM05D001062 ORTHO05D000884 1.7e-09 67.0 191 35.6
THA.LOC104814356 Tarenaya hassleriana HOM05D001062 ORTHO05D000884 1.7e-09 67.0 192 35.4
THA.LOC104798556 Tarenaya hassleriana HOM05D001062 ORTHO05D000884 3.9e-09 65.9 214 33.6
Atru.chr10.453 Acer truncatum HOM05D001062 ORTHO05D000884 5.1e-09 65.5 193 35.8
DCAR_001296 Daucus carota HOM05D001062 ORTHO05D000884 5.1e-09 65.5 188 36.7
AT1G31130 Arabidopsis thaliana HOM05D001062 ORTHO05D000884 6.6e-09 65.1 213 32.9
Duzib248G0137 Durio zibethinus HOM05D001062 ORTHO05D000884 6.6e-09 65.1 190 35.8
TWI15G0161 Tripterygium wilfordii HOM05D001062 ORTHO05D000884 1.1e-08 64.3 190 34.7
Aa31LG2G15070 Aethionema arabicum HOM05D001062 ORTHO05D000884 1.5e-08 63.9 190 34.7
PSO675G0698 Papaver somniferum HOM05D001062 ORTHO05D000884 1.9e-08 63.5 218 33.5
PSO675G1304 Papaver somniferum HOM05D001062 ORTHO05D000884 1.9e-08 63.5 218 33.5
AL7G33970 Arabidopsis lyrata HOM05D001062 ORTHO05D000884 4.3e-08 62.4 121 41.3
THA.LOC104812705 Tarenaya hassleriana HOM05D001062 ORTHO05D000884 2.8e-07 59.7 192 33.9
C01p13950 Brassica napus HOM05D001062 ORTHO05D000884 1.1e-06 57.8 183 33.3
BolC1t01362H Brassica oleracea HOM05D001062 ORTHO05D000884 1.1e-06 57.8 183 33.3
BcaNung01744 Brassica carinata HOM05D001062 ORTHO05D000884 4.0e-06 55.8 182 33.0
MBI02_g35824_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007039 4.0e-06 55.8 219 29.7
Aqoxy3G02734 Aquilegia oxysepala HOM05D001062 ORTHO05D000884 6.8e-06 55.1 189 31.7


User provided reference genes

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