Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0218600 Rhododendron simsii HOM05D010927 ORTHO05D000004 6.9e-83 310.5 143 100.0
Rhsim02G0190000 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.0e-33 147.1 157 55.4
Rhsim02G0189800 Rhododendron simsii HOM05D010927 ORTHO05D010031 2.9e-33 145.6 157 54.8
Rhsim01G0162300 Rhododendron simsii HOM05D010927 ORTHO05D000004 8.0e-31 137.5 177 42.9
RhsimUnG0204100 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.4e-21 105.5 67 80.6
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-14 82.8 139 33.1
Rhsim01G0163900 Rhododendron simsii HOM05D010927 ORTHO05D000004 2.3e-14 82.8 72 58.3
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.2e-14 81.6 139 32.4
CSS0039230 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.7e-12 75.5 140 33.6
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-12 74.3 116 32.8
Rhsim07G0053500 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.3e-12 74.3 49 73.5
CSS0026355 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.2e-11 70.9 143 31.5
vmacro20784 Vaccinium macrocarpon HOM05D010927 ORTHO05D000004 1.2e-10 70.5 145 33.1
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-09 64.3 73 38.4
Rhsim08G0187000 Rhododendron simsii HOM05D040390 ORTHO05D013815 8.6e-09 64.3 58 51.7
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-08 62.4 148 29.7
CSS0028483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-08 62.0 170 24.7
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-08 60.8 195 24.1
CSS0007419 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-07 60.5 169 29.0
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-07 60.1 114 33.3
Rhsim07G0158700 Rhododendron simsii HOM05D010927 ORTHO05D000004 1.6e-07 60.1 67 49.3
CSS0005179 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.8e-07 59.3 77 36.4
Rhsim04G0135500 Rhododendron simsii HOM05D010927 ORTHO05D000004 2.8e-07 59.3 90 36.7
Lj6g0025281 Lotus japonicus HOM05D000003 ORTHO05D000004 3.6e-07 58.9 66 37.9
Rhsim11G0109000 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.6e-07 58.9 58 46.6
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-07 58.5 133 24.8
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-07 58.5 147 27.9
Haze_18381 Corylus avellana HOM05D002854 ORTHO05D003051 4.7e-07 58.5 135 31.1
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-07 58.2 68 36.8
CSS0029089 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.2e-07 58.2 82 39.0
COL.COLO4_22852 Corchorus olitorius HOM05D000003 ORTHO05D002259 6.2e-07 58.2 68 33.8
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 1.1e-06 57.4 141 27.0
SHI29190 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-06 57.0 74 37.8
CSS0037039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.6 185 28.6
PSO017G5984 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.6 57 43.9
PSO210G7070 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.6 68 41.2
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 1.8e-06 56.6 74 37.8
SHI34097 Sapria himalayana HOM05D000003 ORTHO05D000004 1.8e-06 56.6 72 34.7
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 56.2 68 36.8
PSO393G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-06 55.8 57 43.9
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 3.1e-06 55.8 74 37.8
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 3.1e-06 55.8 74 37.8
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 4.0e-06 55.5 84 31.0
HanXRQChr10g0279601 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-06 55.5 127 27.6
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 4.0e-06 55.5 91 34.1
PSO063G7457 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-06 55.5 73 41.1
MBI14_g22160_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.2e-06 55.1 59 35.6
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 8.9e-06 54.3 68 35.3
PSO541G2299 Papaver somniferum HOM05D000003 ORTHO05D000004 8.9e-06 54.3 61 34.4


User provided reference genes

Program Settings