Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.6e-36 154.5 82 100.0
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.3e-29 131.3 83 81.9
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.1e-28 128.6 83 80.7
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.7e-25 119.0 82 73.2
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.1e-24 116.3 81 74.1
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 2.4e-24 115.2 82 70.7
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 2.4e-24 115.2 80 73.8
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 1.0e-22 109.8 86 68.6
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.8e-22 109.0 81 66.7
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.8e-22 109.0 82 68.3
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 5.1e-22 107.5 82 65.9
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 5.1e-22 107.5 80 70.0
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.1e-21 106.3 81 64.2
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.5e-21 105.1 82 64.6
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 5.6e-21 104.0 79 63.3
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 5.6e-21 104.0 79 65.8
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 7.4e-21 103.6 85 64.7
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 7.4e-21 103.6 80 63.8
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 9.6e-21 103.2 81 66.7
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.6e-20 102.4 82 67.1
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 1.6e-20 102.4 81 65.4
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 2.1e-20 102.1 80 63.8
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 2.1e-20 102.1 81 60.5
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.8e-20 101.7 77 66.2
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.8e-20 100.9 82 63.4
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 4.8e-20 100.9 79 64.6
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 4.8e-20 100.9 79 62.0
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 4.8e-20 100.9 83 65.1
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 6.2e-20 100.5 82 62.2
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 6.2e-20 100.5 82 62.2
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 8.1e-20 100.1 81 63.0
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.4e-19 99.4 81 59.3
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.4e-19 99.4 81 60.5
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.8e-19 99.0 82 59.8
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.8e-19 99.0 80 62.5
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 2.4e-19 98.6 79 63.3
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 3.1e-19 98.2 79 59.5
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 3.1e-19 98.2 79 64.6
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 4.0e-19 97.8 76 65.8
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 4.0e-19 97.8 81 61.7
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 5.3e-19 97.4 78 62.8
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 5.3e-19 97.4 77 64.9
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 5.3e-19 97.4 78 64.1
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 6.9e-19 97.1 78 64.1
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.9e-19 97.1 80 61.2
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 6.9e-19 97.1 83 59.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 9.0e-19 96.7 78 62.8
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 9.0e-19 96.7 77 63.6
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 9.0e-19 96.7 78 61.5
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.2e-18 96.3 79 62.0
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.2e-18 96.3 90 60.0
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.5e-18 95.9 81 60.5
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.5e-18 95.9 80 61.2
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.5e-18 95.9 75 65.3
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.0e-18 95.5 78 62.8
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.6e-18 95.1 78 62.8
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 2.6e-18 95.1 79 59.5
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 3.4e-18 94.7 74 66.2
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 4.5e-18 94.4 78 61.5
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 4.5e-18 94.4 81 63.0
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.0e-17 93.2 81 56.8
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.0e-17 93.2 82 59.8
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 1.3e-17 92.8 80 57.5
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.3e-17 92.8 81 56.8
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.7e-17 92.4 77 63.6
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.7e-17 92.4 82 59.8
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.2e-17 92.0 77 58.4
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 2.2e-17 92.0 73 63.0
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 2.2e-17 92.0 81 56.8
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 2.9e-17 91.7 76 60.5
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.9e-17 91.7 86 55.8
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 4.9e-17 90.9 77 57.1
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 6.5e-17 90.5 82 56.1
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.1e-16 89.7 82 58.5
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.4e-16 89.4 123 43.1
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 2.5e-16 88.6 78 60.3
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 3.2e-16 88.2 77 57.1
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 4.2e-16 87.8 77 57.1
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.8e-14 82.4 73 60.3
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 5.1e-14 80.9 84 53.6
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.1e-13 79.7 61 65.6
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.1e-13 79.7 61 65.6
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.6e-12 75.9 64 60.9
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 2.1e-12 75.5 62 62.9
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 2.8e-12 75.1 62 62.9
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.8e-11 72.4 81 48.1
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.4e-11 72.0 63 57.1
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 4.0e-11 71.2 63 60.3
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.6e-10 68.6 37 83.8
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-09 66.2 75 46.7
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 2.9e-09 65.1 71 43.7
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 5.0e-09 64.3 37 78.4
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 6.5e-09 63.9 71 43.7
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.5e-09 63.9 65 50.8
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 8.4e-09 63.5 63 54.0
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.4e-08 62.8 69 44.9
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.2e-08 61.2 38 73.7
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 4.2e-08 61.2 71 43.7
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.2e-07 59.7 37 73.0
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.6e-07 59.3 33 78.8
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 2.1e-07 58.9 38 65.8
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.3e-06 55.5 33 75.8
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.3e-06 55.5 38 63.2
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.3e-06 55.5 38 63.2
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 8.7e-06 53.5 38 65.8
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 8.7e-06 53.5 87 40.2


User provided reference genes

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