Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0205400 Rhododendron simsii HOM05D030420 ORTHO05D011552 1.1e-101 373.2 187 100.0
Rhsim11G0184400 Rhododendron simsii HOM05D030420 ORTHO05D011552 5.0e-57 224.9 189 61.9
CSS0013547 Camellia sinensis var. sinensis HOM05D030420 ORTHO05D043339 4.6e-26 122.1 149 47.0
CSS0033663 Camellia sinensis var. sinensis HOM05D030420 ORTHO05D043339 4.6e-26 122.1 149 47.0
QL11p046590 Quercus lobata HOM05D009526 ORTHO05D011552 4.9e-20 102.1 117 43.6
TWI75G0567 Tripterygium wilfordii HOM05D009526 ORTHO05D011552 1.9e-19 100.1 117 44.4
Ciclev10030263m.g Citrus clementina HOM05D009526 ORTHO05D011552 2.7e-18 96.3 195 35.4
THA.LOC104807777 Tarenaya hassleriana HOM05D009526 ORTHO05D011552 2.1e-15 86.7 107 45.8
Duzib132G0500 Durio zibethinus HOM05D009526 ORTHO05D011552 8.1e-15 84.7 118 45.8
BcaB03g12231 Brassica carinata HOM05D009526 ORTHO05D011552 9.9e-13 77.8 97 39.2
AT2G21237 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 4.9e-12 75.5 127 29.1
A08p23950 Brassica napus HOM05D009526 ORTHO05D011552 6.4e-12 75.1 163 31.9
BcaC01g00263 Brassica carinata HOM05D009526 ORTHO05D011552 8.4e-12 74.7 96 38.5
BraA08t34353Z Brassica rapa HOM05D009526 ORTHO05D011552 8.4e-12 74.7 97 39.2
AL7G10790 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 2.4e-11 73.2 125 33.6
C03p77390 Brassica napus HOM05D009526 ORTHO05D011552 4.1e-11 72.4 96 36.5
AL4G10370 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 5.4e-11 72.0 140 27.9
BolC3t19995H Brassica oleracea HOM05D009526 ORTHO05D011552 7.1e-11 71.6 96 36.5
Sp5g32610 Schrenkiella parvula HOM05D009526 ORTHO05D011552 2.1e-10 70.1 68 42.6
BcaB08g34975 Brassica carinata HOM05D009526 ORTHO05D011552 7.8e-10 68.2 61 44.3
BcaC07g41164 Brassica carinata HOM05D009526 ORTHO05D011552 7.8e-10 68.2 61 44.3
Sc16g0010960 Simmondsia chinensis HOM05D009526 ORTHO05D011552 1.0e-09 67.8 151 29.1
AT4G38905 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 1.3e-09 67.4 168 27.4
Carub.0004s0028 Capsella rubella HOM05D009526 ORTHO05D011552 2.3e-09 66.6 125 29.6
Thhalv10000606m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 2.3e-09 66.6 68 42.6
Thhalv10027568m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 2.3e-09 66.6 76 34.2
AL2G17580 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 3.0e-09 66.2 112 30.4
C08p41710 Brassica napus HOM05D009526 ORTHO05D011552 6.6e-09 65.1 68 39.7
A09p58360 Brassica napus HOM05D009526 ORTHO05D011552 2.5e-08 63.2 61 41.0
BraA09t41228Z Brassica rapa HOM05D009526 ORTHO05D011552 2.5e-08 63.2 61 41.0
BolC8t51734H Brassica oleracea HOM05D009526 ORTHO05D011552 4.3e-08 62.4 68 38.2
CARHR112100 Cardamine hirsuta HOM05D009526 ORTHO05D011552 5.6e-08 62.0 61 39.3
Sp4g00430 Schrenkiella parvula HOM05D009526 ORTHO05D011552 6.2e-07 58.5 68 33.8


User provided reference genes

Program Settings