Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0189900 Rhododendron simsii HOM05D000038 ORTHO05D000423 1.5e-61 239.2 107 100.0
RhsimUnG0189700 Rhododendron simsii HOM05D000038 ORTHO05D011614 5.6e-45 184.1 98 85.7
Rhsim04G0076200 Rhododendron simsii HOM05D000038 ORTHO05D000423 3.5e-39 164.9 103 75.7
Dinv01650 Davidia involucrata HOM05D000038 ORTHO05D000423 7.6e-26 120.6 105 55.2
Dinv12361 Davidia involucrata HOM05D000038 ORTHO05D000423 7.6e-26 120.6 105 55.2
Dinv01652 Davidia involucrata HOM05D000038 ORTHO05D000423 4.8e-20 101.3 109 47.7
TAR629G0237 Trochodendron aralioides HOM05D000038 ORTHO05D000423 1.2e-18 96.7 105 46.7
Oeu030083.1 Olea europaea HOM05D000038 ORTHO05D000423 4.9e-17 91.3 107 43.0
CSS0017627 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000423 1.0e-14 83.6 113 41.6
RhsimUnG0190100 Rhododendron simsii HOM05D000038 ORTHO05D000423 1.0e-14 83.6 102 40.2
Rhsim04G0076100 Rhododendron simsii HOM05D000038 ORTHO05D000423 2.3e-14 82.4 107 38.3
RhsimUnG0189800 Rhododendron simsii HOM05D000038 ORTHO05D000423 2.3e-14 82.4 97 38.1
Solyc07g055690.1 Solanum lycopersicum HOM05D000038 ORTHO05D000423 5.3e-11 71.2 98 34.7
Sopen07g029050 Solanum pennellii HOM05D000038 ORTHO05D000423 5.3e-11 71.2 98 34.7
Lj1C628G0 Lonicera japonica HOM05D000038 ORTHO05D000423 6.9e-11 70.9 93 35.5
MBI06_g18690_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000423 1.2e-10 70.1 103 35.9
MBI07_g00444_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D048545 2.0e-10 69.3 118 36.4
PGSC0003DMG400017331 Solanum tuberosum HOM05D000038 ORTHO05D000423 3.4e-10 68.6 98 33.7
Cpa.g.sc50.59 Carica papaya HOM05D000038 ORTHO05D000423 5.8e-10 67.8 104 34.6
Dinv08371 Davidia involucrata HOM05D001422 ORTHO05D000423 1.3e-09 66.6 55 52.7
Aqoxy4G00246 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 3.8e-09 65.1 102 31.4
Actinidia11182 Actinidia chinensis HOM05D000038 ORTHO05D000423 6.5e-09 64.3 102 33.3
Aqoxy4G02061 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 8.4e-09 63.9 60 45.0
Eucgr.K01148 Eucalyptus grandis HOM05D000038 ORTHO05D000423 8.4e-09 63.9 77 40.3
CAN.G803.17 Capsicum annuum HOM05D000038 ORTHO05D000423 1.1e-08 63.5 99 33.3
Eucgr.K03222 Eucalyptus grandis HOM05D000038 ORTHO05D000423 1.4e-08 63.2 109 30.3
Eucgr.K03236 Eucalyptus grandis HOM05D000038 ORTHO05D000423 1.4e-08 63.2 108 29.6
Eucgr.K01177 Eucalyptus grandis HOM05D000038 ORTHO05D000423 1.9e-08 62.8 98 29.6
Rhsim06G0123700 Rhododendron simsii HOM05D000038 ORTHO05D000423 1.9e-08 62.8 100 36.0
vmacro12415 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 1.9e-08 62.8 106 32.1
vmacro12424 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 1.9e-08 62.8 102 34.3
Atru.chr10.1533 Acer truncatum HOM05D000038 ORTHO05D000423 2.5e-08 62.4 109 33.0
vmacro12426 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 2.5e-08 62.4 101 37.6
Nitab4.5_0003133g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 3.2e-08 62.0 99 32.3
PGR142G0972 Punica granatum HOM05D000038 ORTHO05D000423 3.2e-08 62.0 109 30.3
Eucgr.L02352 Eucalyptus grandis HOM05D000038 ORTHO05D000423 4.2e-08 61.6 109 29.4
Rhsim06G0124900 Rhododendron simsii HOM05D000038 ORTHO05D000423 4.2e-08 61.6 105 30.5
Actinidia24394 Actinidia chinensis HOM05D001422 ORTHO05D000423 5.5e-08 61.2 57 43.9
HPP92_008754 Vanilla planifolia HOM05D000038 ORTHO05D000423 5.5e-08 61.2 103 29.1
HPP92_020069 Vanilla planifolia HOM05D000038 ORTHO05D000423 5.5e-08 61.2 108 33.3
Atru.chr10.1544 Acer truncatum HOM05D000038 ORTHO05D000423 7.1e-08 60.8 110 33.6
Os02g0234450 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000423 7.1e-08 60.8 53 43.4
PGR142G0667 Punica granatum HOM05D000038 ORTHO05D000423 7.1e-08 60.8 105 31.4
QL02p077182 Quercus lobata HOM05D000038 ORTHO05D000423 7.1e-08 60.8 122 32.8
Rhsim06G0123800 Rhododendron simsii HOM05D000038 ORTHO05D000423 7.1e-08 60.8 111 31.5
Rhsim06G0125300 Rhododendron simsii HOM05D000038 ORTHO05D000423 7.1e-08 60.8 100 36.0
Ciclev10017695m.g Citrus clementina HOM05D000038 ORTHO05D000423 9.3e-08 60.5 105 31.4
Hma1.2p1_0178F.1_g078370 Hydrangea macrophylla HOM05D000038 ORTHO05D000423 9.3e-08 60.5 100 33.0
MBI02_g01134_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000423 9.3e-08 60.5 119 35.3
PGR142G1212 Punica granatum HOM05D000038 ORTHO05D000423 9.3e-08 60.5 103 30.1
Aqoxy3G01238 Aquilegia oxysepala HOM05D001422 ORTHO05D000423 1.2e-07 60.1 101 32.7
Ciclev10014371m.g Citrus clementina HOM05D000038 ORTHO05D000423 1.2e-07 60.1 105 31.4
QL02p077194 Quercus lobata HOM05D000038 ORTHO05D000423 1.2e-07 60.1 117 30.8
CAN.G803.18 Capsicum annuum HOM05D000038 ORTHO05D000423 1.6e-07 59.7 75 37.3
Cc05_g08990 Coffea canephora HOM05D000038 ORTHO05D000423 1.6e-07 59.7 99 30.3
Eucgr.K01181 Eucalyptus grandis HOM05D000038 ORTHO05D000423 1.6e-07 59.7 74 32.4
Eucgr.L01598 Eucalyptus grandis HOM05D000038 ORTHO05D000423 2.1e-07 59.3 108 30.6
PGR142G3627 Punica granatum HOM05D000038 ORTHO05D000423 2.1e-07 59.3 112 28.6
Migut.H02125 Erythranthe guttata HOM05D000038 ORTHO05D000423 2.7e-07 58.9 107 26.2
Lj1C629T1 Lonicera japonica HOM05D000038 ORTHO05D000423 2.7e-07 58.9 94 34.0
Peaxi162Scf00154g01023 Petunia axillaris HOM05D000038 ORTHO05D000423 2.7e-07 58.9 52 44.2
Potri.004G061900 Populus trichocarpa HOM05D000038 ORTHO05D000423 2.7e-07 58.9 99 28.3
PGSC0003DMG400017330 Solanum tuberosum HOM05D000038 ORTHO05D000423 2.7e-07 58.9 52 46.2
Migut.H02126 Erythranthe guttata HOM05D000038 ORTHO05D000423 3.5e-07 58.5 104 26.0
PGR142G0181 Punica granatum HOM05D000038 ORTHO05D000423 3.5e-07 58.5 101 32.7
Rhsim06G0124600 Rhododendron simsii HOM05D000038 ORTHO05D000423 3.5e-07 58.5 100 36.0
CAN.G803.19 Capsicum annuum HOM05D000038 ORTHO05D000423 4.6e-07 58.2 52 44.2
Nitab4.5_0000883g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 4.6e-07 58.2 52 44.2
PGR142G2626 Punica granatum HOM05D000038 ORTHO05D000423 4.6e-07 58.2 113 26.5
SEGI_06531 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 4.6e-07 58.2 80 32.5
CAN.G803.29 Capsicum annuum HOM05D000038 ORTHO05D000423 6.0e-07 57.8 52 44.2
Cc05_g08940 Coffea canephora HOM05D000038 ORTHO05D000423 6.0e-07 57.8 53 39.6
Sopen07g029040 Solanum pennellii HOM05D000038 ORTHO05D000423 6.0e-07 57.8 52 46.2
PGSC0003DMG400046324 Solanum tuberosum HOM05D000038 ORTHO05D000423 1.0e-06 57.0 89 37.1
Hma1.2p1_0178F.1_g078360 Hydrangea macrophylla HOM05D000038 ORTHO05D000423 1.3e-06 56.6 100 31.0
Os01g0958200 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000423 1.3e-06 56.6 117 28.2
Dinv11420 Davidia involucrata HOM05D007975 ORTHO05D000423 1.8e-06 56.2 52 40.4
PGR142G0140 Punica granatum HOM05D000038 ORTHO05D000423 1.8e-06 56.2 113 26.5
TAR410G0004 Trochodendron aralioides HOM05D000038 ORTHO05D000423 1.8e-06 56.2 101 29.7
Aqoxy4G00242 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 2.3e-06 55.8 100 30.0
Eucgr.K03223 Eucalyptus grandis HOM05D000038 ORTHO05D000423 2.3e-06 55.8 93 34.4
Nitab4.5_0005259g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 2.3e-06 55.8 52 42.3
HPP92_021769 Vanilla planifolia HOM05D000038 ORTHO05D000423 2.3e-06 55.8 104 29.8
Actinidia24392 Actinidia chinensis HOM05D000038 ORTHO05D000423 3.0e-06 55.5 60 38.3
Cc05_g08950 Coffea canephora HOM05D000038 ORTHO05D000423 3.0e-06 55.5 53 37.7
Eucgr.K01182 Eucalyptus grandis HOM05D000038 ORTHO05D000423 3.0e-06 55.5 89 32.6
Thecc.07G127400 Theobroma cacao HOM05D000038 ORTHO05D000423 3.0e-06 55.5 114 29.8
Aqoxy4G00245 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 3.9e-06 55.1 99 30.3
Eucgr.K03237 Eucalyptus grandis HOM05D000038 ORTHO05D000423 3.9e-06 55.1 109 27.5
Lj1A628T7 Lonicera japonica HOM05D000038 ORTHO05D000423 5.1e-06 54.7 95 29.5
Aqoxy4G00248 Aquilegia oxysepala HOM05D001422 ORTHO05D000423 6.7e-06 54.3 62 40.3
Eucgr.K03224 Eucalyptus grandis HOM05D000038 ORTHO05D000423 8.7e-06 53.9 113 27.4
QL93p0205_0085 Quercus lobata HOM05D000038 ORTHO05D000423 8.7e-06 53.9 96 31.2
vmacro12425 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 8.7e-06 53.9 50 44.0


User provided reference genes

Program Settings