Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.8e-125 452.6 231 100.0
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.4e-117 426.4 284 81.0
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 6.3e-110 401.0 284 77.1
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.8e-94 348.2 342 59.4
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.5e-92 341.7 284 64.4
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.5e-92 341.7 284 64.4
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.2e-89 333.6 284 65.1
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.7e-83 313.2 264 63.6
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 3.0e-80 302.4 264 61.7
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.2e-79 300.4 269 59.9
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 2.6e-79 299.3 270 60.4
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 5.7e-79 298.1 264 60.6
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 7.5e-79 297.7 283 58.7
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 7.5e-79 297.7 278 58.3
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.7e-78 296.6 278 57.6
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 2.2e-78 296.2 278 57.9
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 8.3e-78 294.3 268 60.1
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.1e-77 293.9 240 67.1
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.1e-77 293.9 271 60.9
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.8e-77 293.1 264 59.5
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 2.4e-77 292.7 271 59.4
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 7.0e-77 291.2 267 59.6
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.6e-76 290.0 268 58.6
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 2.0e-76 289.7 276 55.8
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.7e-76 289.3 269 58.4
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 2.7e-76 289.3 274 56.6
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 2.7e-76 289.3 286 57.0
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 3.5e-76 288.9 264 59.5
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 7.8e-76 287.7 278 57.6
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 7.8e-76 287.7 264 59.1
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 1.0e-75 287.3 266 59.8
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 2.3e-75 286.2 268 55.6
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 2.9e-75 285.8 271 57.6
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.1e-74 283.9 279 53.4
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 2.5e-74 282.7 271 55.7
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.5e-74 282.7 275 56.4
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 4.3e-74 282.0 266 57.1
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 5.6e-74 281.6 268 56.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.6e-74 281.6 153 92.8
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.2e-73 280.4 268 56.3
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.6e-73 280.0 268 56.7
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 2.1e-73 279.6 269 57.2
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.7e-73 278.5 268 56.3
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 2.3e-72 276.2 271 54.6
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.0e-72 275.8 281 54.8
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 6.8e-72 274.6 264 56.4
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.5e-71 273.5 264 55.3
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 3.4e-71 272.3 273 55.3
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 4.4e-71 271.9 266 53.8
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 4.4e-71 271.9 266 56.0
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 4.4e-71 271.9 266 57.5
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 9.8e-71 270.8 264 56.4
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 9.8e-71 270.8 264 56.4
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.3e-70 270.4 264 55.3
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.3e-70 270.4 278 55.0
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.2e-70 269.6 269 53.5
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 2.9e-70 269.2 263 57.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 2.9e-70 269.2 271 55.7
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 4.9e-70 268.5 260 55.8
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 6.4e-70 268.1 267 53.2
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 8.3e-70 267.7 278 52.9
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.1e-69 267.3 264 54.9
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 2.4e-69 266.2 280 52.9
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.4e-69 266.2 278 54.3
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.4e-69 266.2 241 60.6
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.4e-69 266.2 270 54.1
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 3.2e-69 265.8 286 52.8
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 4.1e-69 265.4 264 53.4
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 5.4e-69 265.0 280 52.5
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 5.4e-69 265.0 277 53.8
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 7.0e-69 264.6 270 53.7
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 9.2e-69 264.2 264 53.4
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 9.2e-69 264.2 264 54.2
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 9.2e-69 264.2 273 53.5
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.6e-68 263.5 267 53.2
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 2.0e-68 263.1 273 53.5
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.7e-68 262.7 267 51.7
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 6.0e-68 261.5 270 54.1
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 6.0e-68 261.5 283 52.3
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.0e-67 260.8 244 58.6
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.3e-67 259.6 267 52.4
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-67 259.6 267 52.4
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.3e-67 259.6 244 56.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 6.6e-67 258.1 264 53.0
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.5e-66 256.9 272 53.7
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 2.1e-65 253.1 272 52.6
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 4.7e-65 251.9 263 52.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 3.1e-64 249.2 266 53.0
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 2.6e-63 246.1 272 51.1
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 3.4e-63 245.7 293 49.1
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 7.5e-63 244.6 272 50.7
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 8.3e-62 241.1 237 57.8
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 7.8e-60 234.6 263 46.8
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.0e-59 234.2 234 55.1
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 1.9e-58 229.9 263 46.0
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 4.3e-58 228.8 225 55.6
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 5.6e-58 228.4 221 57.5
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 7.3e-58 228.0 237 54.9
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.4e-56 223.8 255 45.9
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.6e-55 219.5 261 49.8
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 7.1e-53 211.5 393 36.1
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.1e-52 209.9 232 49.6
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.7e-51 206.8 229 53.3
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 7.6e-47 191.4 266 42.9
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 4.6e-44 182.2 136 65.4
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 3.0e-43 179.5 124 69.4
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 3.0e-43 179.5 256 44.5
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 1.8e-40 170.2 125 70.4
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 3.3e-34 149.4 185 45.9
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 2.4e-32 143.3 197 44.2
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.0e-27 126.3 196 42.9
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 5.1e-27 125.6 157 49.0
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 8.1e-25 118.2 117 56.4
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.7e-22 110.5 74 75.7
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.4e-21 107.5 74 74.3
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 2.5e-21 106.7 105 57.1
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 7.9e-20 101.7 72 70.8
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 5.1e-19 99.0 77 67.5
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.5e-10 70.9 181 34.8
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 9.7e-10 68.2 46 63.0
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 4.1e-08 62.8 155 32.9


User provided reference genes

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