Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0178600 Rhododendron simsii HOM05D007791 ORTHO05D000653 4.3e-93 344.7 187 100.0
Potri.006G088700 Populus trichocarpa HOM05D007791 ORTHO05D000653 6.0e-10 68.6 94 44.7
Potri.006G088500 Populus trichocarpa HOM05D007791 ORTHO05D000653 2.3e-09 66.6 94 44.7
Potri.006G088616 Populus trichocarpa HOM05D007791 ORTHO05D000653 2.3e-09 66.6 94 44.7
Potri.006G088664 Populus trichocarpa HOM05D007791 ORTHO05D000653 5.1e-09 65.5 64 56.2
CSS0023434 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 2.5e-08 63.2 106 42.5
CSS0036268 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 2.5e-08 63.2 106 42.5
Ciclev10013177m.g Citrus clementina HOM05D007791 ORTHO05D000653 1.2e-07 60.8 55 56.4
Gohir.A04G084100 Gossypium hirsutum HOM05D007791 ORTHO05D000653 1.2e-07 60.8 56 53.6
Gohir.D04G122900 Gossypium hirsutum HOM05D007791 ORTHO05D000653 1.2e-07 60.8 56 55.4
Dinv37146 Davidia involucrata HOM05D007791 ORTHO05D000653 1.6e-07 60.5 64 48.4
CSS0008915 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 2.1e-07 60.1 56 58.9
Gorai.012G105800 Gossypium raimondii HOM05D007791 ORTHO05D000653 2.8e-07 59.7 56 53.6
RhsimUnG0178500 Rhododendron simsii HOM05D007791 ORTHO05D000653 3.6e-07 59.3 75 48.0
Phvul.005G032000 Phaseolus vulgaris HOM05D007791 ORTHO05D000653 4.7e-07 58.9 56 58.9
Manes.09G094800 Manihot esculenta HOM05D007791 ORTHO05D000653 6.2e-07 58.5 73 45.2
Psat1g089000 Pisum sativum HOM05D007791 ORTHO05D000653 6.2e-07 58.5 56 57.1
Duzib106G0108 Durio zibethinus HOM05D007791 ORTHO05D000653 8.1e-07 58.2 57 52.6
Peaxi162Scf00013g00738 Petunia axillaris HOM05D007791 ORTHO05D000653 8.1e-07 58.2 56 51.8
PGR031G1849 Punica granatum HOM05D007791 ORTHO05D000653 8.1e-07 58.2 57 56.1
Rhsim05G0195100 Rhododendron simsii HOM05D007791 ORTHO05D000653 8.1e-07 58.2 77 45.5
GSVIVG01034125001 Vitis vinifera HOM05D007791 ORTHO05D000653 8.1e-07 58.2 68 45.6
CsaV3_4G025200 Cucumis sativus L. HOM05D007791 ORTHO05D000653 1.1e-06 57.8 60 51.7
Duzib106G0736 Durio zibethinus HOM05D007791 ORTHO05D000653 1.1e-06 57.8 57 49.1
CAN.G587.57 Capsicum annuum HOM05D007791 ORTHO05D000653 1.4e-06 57.4 65 46.2
Thecc.05G034600 Theobroma cacao HOM05D007791 ORTHO05D000653 1.8e-06 57.0 57 50.9
vmacro08637 Vaccinium macrocarpon HOM05D007791 ORTHO05D000653 1.8e-06 57.0 57 57.9
vmacro08656 Vaccinium macrocarpon HOM05D007791 ORTHO05D000653 1.8e-06 57.0 57 57.9
Duzib106G1185 Durio zibethinus HOM05D007791 ORTHO05D000653 3.1e-06 56.2 61 47.5
Glyma.11G151000 Glycine max HOM05D007791 ORTHO05D000653 3.1e-06 56.2 64 54.7
Nitab4.5_0007505g0010 Nicotiana tabacum HOM05D002101 ORTHO05D002126 3.1e-06 56.2 56 50.0
Solyc06g069400.4 Solanum lycopersicum HOM05D002101 ORTHO05D002126 4.0e-06 55.8 56 50.0
PGSC0003DMG400004064 Solanum tuberosum HOM05D007791 ORTHO05D000653 4.0e-06 55.8 56 50.0
Nitab4.5_0002449g0040 Nicotiana tabacum HOM05D002101 ORTHO05D002126 5.2e-06 55.5 56 50.0
Rhsim05G0195200 Rhododendron simsii HOM05D007791 ORTHO05D000653 5.2e-06 55.5 60 48.3
Rhsim05G0195400 Rhododendron simsii HOM05D007791 ORTHO05D000653 5.2e-06 55.5 60 46.7
COL.COLO4_14751 Corchorus olitorius HOM05D007791 ORTHO05D000653 8.9e-06 54.7 57 50.9
TWI74G0823 Tripterygium wilfordii HOM05D007791 ORTHO05D000653 8.9e-06 54.7 56 53.6
HPP92_012980 Vanilla planifolia HOM05D007791 ORTHO05D000653 8.9e-06 54.7 54 51.9


User provided reference genes

Program Settings