Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 0.0e+00 1374.0 830 100.0
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.1e-252 877.1 663 86.3
Rhsim01G0158000 Rhododendron simsii HOM05D017361 ORTHO05D007523 5.5e-132 476.1 395 68.6
Rhsim01G0158100 Rhododendron simsii HOM05D017361 ORTHO05D001590 4.7e-91 340.1 467 55.5
Rhsim04G0158200 Rhododendron simsii HOM05D017361 ORTHO05D001590 4.9e-80 303.5 207 77.3
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-69 268.5 513 41.7
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-67 262.3 218 65.6
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.6e-38 164.5 169 55.6
RhsimUnG0084500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-27 129.0 102 64.7
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-18 99.8 234 26.5
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 9.1e-18 96.7 237 26.6
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-17 94.7 324 27.2
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-17 94.7 316 24.7
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-17 94.7 324 25.9
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-17 94.7 324 27.2
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-17 94.7 324 27.2
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.7e-17 93.6 315 25.1
vmacro05246 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.7e-17 93.6 179 29.6
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-16 93.2 237 25.7
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.7e-16 92.4 168 29.2
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.2e-16 92.0 206 26.2
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-16 90.9 875 20.3
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-16 90.9 875 20.3
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.5e-16 90.1 358 24.9
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-15 89.7 217 25.8
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-15 89.7 217 25.8
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.9e-15 89.0 216 24.5
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.5e-15 88.6 376 27.1
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.2e-14 86.3 237 24.1
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.1e-14 85.5 193 25.4
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-14 85.1 314 26.1
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.7e-14 84.3 259 25.5
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.0e-13 81.3 301 22.6
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.0e-13 81.3 317 22.7
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-12 79.3 244 25.4
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-12 78.6 280 27.9
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.4e-12 77.8 191 30.4
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.8e-12 76.6 203 27.1
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-11 75.9 203 27.1
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.7e-11 74.7 281 22.1
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-11 74.3 281 24.9
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.3e-11 73.6 339 25.7
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-10 73.2 260 23.1
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.8e-10 72.4 211 23.7
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-10 72.0 270 22.6
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-10 71.6 260 23.1
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.1e-10 71.2 333 22.8
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.0e-10 70.5 202 26.7
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.0e-10 70.5 343 23.6
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.2e-09 69.7 262 20.6
Rhsim10G0070400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-09 69.3 309 24.9
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 2.0e-09 68.9 284 23.6
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.5e-09 68.2 257 23.3
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 3.5e-09 68.2 212 25.9
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.3e-08 66.2 272 23.2
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.2e-08 65.5 136 30.1
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.2e-08 65.5 147 28.6
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.2e-08 65.5 182 25.3
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.5e-08 63.9 96 33.3
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.5e-08 63.9 93 34.4
CSS0041926 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 8.5e-08 63.5 82 37.8
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-07 62.8 263 24.7
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-07 62.8 57 40.4
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-07 62.8 320 20.9
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-07 62.8 320 20.9
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.2e-07 61.6 147 27.2
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.2e-07 61.6 171 26.3
CSS0042257 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 4.2e-07 61.2 81 37.0
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.5e-07 60.8 147 27.2
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.5e-07 60.8 54 46.3
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 7.2e-07 60.5 374 21.1
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.4e-07 60.1 89 31.5
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 9.4e-07 60.1 75 40.0
PSO333G0027 Papaver somniferum HOM05D017361 ORTHO05D010137 1.2e-06 59.7 91 34.1
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-06 59.3 129 34.1
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.1e-06 58.9 65 41.5
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 2.1e-06 58.9 67 37.3
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.7e-06 57.8 363 20.9


User provided reference genes

Program Settings