Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0149800 Rhododendron simsii HOM05D008924 ORTHO05D010909 5.6e-50 200.7 103 100.0
Dinv20139 Davidia involucrata HOM05D008924 ORTHO05D010909 5.4e-21 104.4 101 59.4
Dinv00754 Davidia involucrata HOM05D008924 ORTHO05D010909 3.0e-19 98.6 99 56.6
Prupe.1G291000 Prunus persica HOM05D008924 ORTHO05D010909 2.5e-10 68.9 101 43.6
MD11G1154600 Malus domestica HOM05D008924 ORTHO05D010909 7.3e-10 67.4 76 51.3
Manes.05G111400 Manihot esculenta HOM05D008924 ORTHO05D010909 1.3e-09 66.6 103 45.6
Sc11g0002430 Simmondsia chinensis HOM05D008924 ORTHO05D010909 3.6e-09 65.1 101 42.6
MD03G1131700 Malus domestica HOM05D008924 ORTHO05D010909 4.8e-09 64.7 63 54.0
Gohir.A12G159750 Gossypium hirsutum HOM05D008924 ORTHO05D010909 1.1e-08 63.5 59 59.3
TWI31G1119 Tripterygium wilfordii HOM05D008924 ORTHO05D010909 1.8e-08 62.8 68 47.1
Dinv20137 Davidia involucrata HOM05D000041 ORTHO05D000061 3.1e-08 62.0 104 42.3
RcHm_v2.0_Chr1g0340821 Rosa chinensis HOM05D008924 ORTHO05D010909 6.9e-08 60.8 58 48.3
Dinv00752 Davidia involucrata HOM05D008924 ORTHO05D010909 1.2e-07 60.1 96 43.8
Gorai.008G175600 Gossypium raimondii HOM05D008924 ORTHO05D010909 2.0e-07 59.3 38 65.8
Gohir.D12G162950 Gossypium hirsutum HOM05D008924 ORTHO05D010909 2.6e-07 58.9 38 65.8
Dinv20135 Davidia involucrata HOM05D008924 ORTHO05D010909 4.5e-07 58.2 78 44.9
Potri.T170700 Populus trichocarpa HOM05D008924 ORTHO05D010909 4.5e-07 58.2 75 44.0
Nn4g23515 Nelumbo nucifera HOM05D008924 ORTHO05D010909 7.6e-07 57.4 109 39.4
QL11p007253 Quercus lobata HOM05D008924 ORTHO05D010909 7.6e-07 57.4 61 49.2
Hma1.2p1_0473F.1_g160160 Hydrangea macrophylla HOM05D008924 ORTHO05D010909 1.3e-06 56.6 64 48.4
COL.COLO4_27839 Corchorus olitorius HOM05D008924 ORTHO05D010909 1.7e-06 56.2 102 38.2
Cfa021028 Carpinus fangiana HOM05D008924 ORTHO05D010909 2.2e-06 55.8 100 42.0
FAN07G2892 Fragaria x ananassa HOM05D008924 ORTHO05D010909 6.4e-06 54.3 102 34.3
CAN.G1021.17 Capsicum annuum HOM05D041871 ORTHO05D033998 8.4e-06 53.9 71 35.2
Cfa008852 Carpinus fangiana HOM05D008924 ORTHO05D010909 8.4e-06 53.9 61 54.1
Lsat_1_v5_gn_4_89240 Lactuca sativa HOM05D008924 ORTHO05D010909 8.4e-06 53.9 63 42.9
VMungo0720G2482 Vigna mungo HOM05D020131 ORTHO05D025638 8.4e-06 53.9 72 40.3


User provided reference genes

Program Settings