Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 1.5e-56 222.6 116 100.0
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 3.9e-52 208.0 116 93.1
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 2.8e-50 201.8 116 90.5
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 5.3e-49 197.6 103 100.0
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 2.7e-45 185.3 117 85.5
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 3.6e-45 184.9 117 84.6
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.4e-44 183.0 117 80.3
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 3.0e-44 181.8 112 86.6
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 6.7e-44 180.6 116 76.7
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 6.7e-44 180.6 117 82.1
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 8.8e-44 180.3 109 86.2
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 1.5e-43 179.5 116 77.6
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 2.5e-43 178.7 112 83.0
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 4.3e-43 177.9 116 81.0
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.3e-42 176.4 117 79.5
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 1.7e-42 176.0 116 80.2
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 4.8e-42 174.5 118 78.0
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 6.3e-42 174.1 107 80.4
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 8.2e-42 173.7 116 75.9
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.4e-41 172.9 112 78.6
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.4e-41 172.9 112 79.5
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.4e-41 172.9 113 77.9
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.1e-41 171.8 116 78.4
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 3.1e-41 171.8 110 80.9
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 4.1e-41 171.4 110 80.0
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 4.1e-41 171.4 116 76.7
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 4.1e-41 171.4 116 76.7
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 5.3e-41 171.0 116 75.9
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 6.9e-41 170.6 115 76.5
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 6.9e-41 170.6 110 80.0
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 9.1e-41 170.2 110 78.2
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 9.1e-41 170.2 111 79.3
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 1.2e-40 169.9 109 79.8
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.5e-40 169.5 112 76.8
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 1.5e-40 169.5 116 74.1
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 2.0e-40 169.1 110 79.1
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 2.0e-40 169.1 110 79.1
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 2.6e-40 168.7 117 73.5
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.6e-40 168.7 111 78.4
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 2.6e-40 168.7 110 79.1
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 3.4e-40 168.3 110 79.1
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 5.9e-40 167.5 112 75.9
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 7.7e-40 167.2 110 78.2
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.0e-39 166.8 110 78.2
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 1.0e-39 166.8 116 75.0
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 1.0e-39 166.8 112 75.9
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 1.7e-39 166.0 116 75.9
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 2.2e-39 165.6 110 78.2
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 5.0e-39 164.5 112 75.9
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 6.5e-39 164.1 110 78.2
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 6.5e-39 164.1 116 72.4
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 6.5e-39 164.1 112 75.0
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 1.1e-38 163.3 108 78.7
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 1.9e-38 162.5 117 72.6
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 1.9e-38 162.5 113 73.5
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 1.9e-38 162.5 116 70.7
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 3.2e-38 161.8 112 74.1
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 3.2e-38 161.8 112 74.1
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 3.2e-38 161.8 112 74.1
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 3.2e-38 161.8 112 74.1
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 3.2e-38 161.8 112 74.1
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 3.2e-38 161.8 112 74.1
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 3.2e-38 161.8 110 76.4
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 3.2e-38 161.8 110 76.4
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 4.2e-38 161.4 115 72.2
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 4.2e-38 161.4 112 74.1
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 5.5e-38 161.0 112 74.1
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 7.2e-38 160.6 113 73.5
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 9.4e-38 160.2 113 72.6
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.2e-37 159.8 110 73.6
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.6e-37 159.5 111 75.7
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 2.7e-37 158.7 113 71.7
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 6.1e-37 157.5 115 71.3
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 7.9e-37 157.1 110 72.7
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 7.9e-37 157.1 109 72.5
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.0e-36 156.8 102 77.5
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.4e-36 156.4 107 75.7
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 5.1e-36 154.5 110 72.7
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 5.1e-36 154.5 115 71.3
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 5.1e-36 154.5 113 70.8
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 1.1e-35 153.3 110 70.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 2.0e-35 152.5 109 70.6
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 9.7e-35 150.2 114 66.7
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.1e-33 145.2 138 60.1
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.6e-32 142.1 96 77.1
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 4.5e-32 141.4 86 84.9
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 1.3e-31 139.8 104 68.3
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 1.3e-31 139.8 92 76.1
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.8e-31 138.3 88 77.3
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 8.5e-31 137.1 96 80.2
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 1.5e-30 136.3 89 79.8
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.9e-30 136.0 89 79.8
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 9.4e-30 133.7 89 78.7
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.2e-29 133.3 105 70.5
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.2e-29 133.3 89 77.5
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.2e-29 133.3 90 77.8
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.6e-29 132.9 171 48.5
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 8.0e-29 130.6 89 77.5
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 8.0e-29 130.6 89 78.7
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.4e-28 129.8 87 78.2
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.8e-28 129.4 84 76.2
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 5.2e-28 127.9 86 77.9
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.1e-27 126.7 82 78.0
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 5.7e-27 124.4 83 75.9
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.4e-25 119.8 72 83.3
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.6e-24 116.3 118 56.8
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 6.5e-23 110.9 79 73.4
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.0e-20 103.6 89 60.7
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.0e-20 103.6 64 82.8
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.6e-16 89.7 77 61.0
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 2.0e-16 89.4 108 49.1
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 2.7e-16 89.0 70 65.7
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.7e-15 86.3 59 74.6
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 2.9e-15 85.5 109 50.5
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.5e-14 83.2 52 76.9
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.6e-13 78.6 60 75.0
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.7e-10 69.7 114 38.6
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 2.4e-09 65.9 107 41.1


User provided reference genes

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