Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0134900 Rhododendron simsii HOM05D060566 ORTHO05D000971 9.9e-112 406.8 199 100.0
RhsimUnG0064100 Rhododendron simsii HOM05D060566 ORTHO05D000971 3.5e-109 398.3 196 99.0
Rhsim09G0107000 Rhododendron simsii HOM05D001186 ORTHO05D000971 4.2e-30 135.6 191 46.6
CSS0012233 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 3.0e-15 86.3 210 33.8
TAR629G3519 Trochodendron aralioides HOM05D001186 ORTHO05D000971 2.8e-13 79.7 226 31.4
QL01p041163 Quercus lobata HOM05D001186 ORTHO05D000971 1.2e-11 74.3 211 30.3
Dinv31630 Davidia involucrata HOM05D001186 ORTHO05D000971 2.0e-11 73.6 186 31.2
COL.COLO4_07638 Corchorus olitorius HOM05D001186 ORTHO05D000971 2.6e-11 73.2 181 32.0
ATR1125G102 Amborella trichopoda HOM05D001186 ORTHO05D000971 3.4e-11 72.8 211 34.6
Hma1.2p1_0061F.1_g033760 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 4.4e-11 72.4 193 35.2
Lsat_1_v5_gn_8_40921 Lactuca sativa HOM05D001186 ORTHO05D000971 5.8e-11 72.0 173 31.8
Dinv21073 Davidia involucrata HOM05D001186 ORTHO05D000971 7.5e-11 71.6 128 39.8
Duzib268G0437 Durio zibethinus HOM05D001186 ORTHO05D000971 9.8e-11 71.2 205 30.2
Nn4g23866 Nelumbo nucifera HOM05D001186 ORTHO05D000971 1.7e-10 70.5 223 30.0
Nitab4.5_0000489g0090 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.7e-10 70.5 196 31.6
Lalb_Chr21g0308871 Lupinus albus HOM05D001186 ORTHO05D000971 2.9e-10 69.7 153 30.7
Peaxi162Scf00051g00055 Petunia axillaris HOM05D001186 ORTHO05D000971 6.4e-10 68.6 66 51.5
Cc11_g10020 Coffea canephora HOM05D001186 ORTHO05D000971 1.4e-09 67.4 194 32.0
Sabra12G0039700 Salix brachista HOM05D001186 ORTHO05D000971 2.4e-09 66.6 203 32.5
CiPaw.15G086400 Carya illinoinensis HOM05D001186 ORTHO05D000971 7.0e-09 65.1 207 29.5
Haze_17495 Corylus avellana HOM05D001186 ORTHO05D000971 7.0e-09 65.1 226 28.8
CSS0032299 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.2e-08 64.3 157 34.4
CiPaw.16G065400 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.2e-08 64.3 120 35.8
MBI09_g40766_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 1.6e-08 63.9 223 28.7
SalBow8G5321 Salvia bowleyana HOM05D001186 ORTHO05D000971 1.6e-08 63.9 108 38.9
TPR.G33348 Trifolium pratense HOM05D000033 ORTHO05D001999 1.6e-08 63.9 96 41.7
Lalb_Chr04g0254691 Lupinus albus HOM05D001186 ORTHO05D000971 2.0e-08 63.5 206 31.6
Oeu034232.1 Olea europaea HOM05D001186 ORTHO05D000971 2.7e-08 63.2 155 36.1
Oeu051260.1 Olea europaea HOM05D001186 ORTHO05D000971 2.7e-08 63.2 79 43.0
TAR371G0320 Trochodendron aralioides HOM05D001186 ORTHO05D000971 2.7e-08 63.2 184 33.2
QL10p025510 Quercus lobata HOM05D001186 ORTHO05D000971 3.5e-08 62.8 223 27.8
Dinv15684 Davidia involucrata HOM05D012236 ORTHO05D001602 4.6e-08 62.4 115 39.1
Medtr1g028910 Medicago truncatula HOM05D001186 ORTHO05D000971 4.6e-08 62.4 70 47.1
CAN.G1664.1 Capsicum annuum HOM05D001186 ORTHO05D000971 6.0e-08 62.0 70 45.7
Nitab4.5_0006679g0010 Nicotiana tabacum HOM05D001186 ORTHO05D000971 6.0e-08 62.0 71 45.1
Oeu014479.1 Olea europaea HOM05D001186 ORTHO05D000971 6.0e-08 62.0 79 41.8
ECA233G1982 Erigeron canadensis HOM05D001186 ORTHO05D000971 7.8e-08 61.6 204 29.4
Lalb_Chr06g0166031 Lupinus albus HOM05D001186 ORTHO05D000971 7.8e-08 61.6 75 42.7
Potri.005G189300 Populus trichocarpa HOM05D001186 ORTHO05D000971 7.8e-08 61.6 124 31.5
arahy.Tifrunner.gnm1.ann1.MZ5XB8 Arachis hypogaea HOM05D001186 ORTHO05D000971 1.0e-07 61.2 72 48.6
MSTRG.847 Avicennia marina HOM05D001186 ORTHO05D000971 1.0e-07 61.2 175 32.0
Nitab4.5_0000633g0120 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.0e-07 61.2 71 45.1
Phvul.007G028200 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 1.0e-07 61.2 86 39.5
QL01p041179 Quercus lobata HOM05D001186 ORTHO05D000971 1.0e-07 61.2 102 40.2
QL02p024757 Quercus lobata HOM05D001186 ORTHO05D000971 1.0e-07 61.2 86 44.2
GSVIVG01001661001 Vitis vinifera HOM05D001186 ORTHO05D000971 1.0e-07 61.2 62 51.6
Nitab4.5_0000427g0090 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.3e-07 60.8 70 44.3
Aqoxy6G00387 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 1.7e-07 60.5 80 42.5
Nitab4.5_0000299g0270 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.7e-07 60.5 70 44.3
Glyma.14G124800 Glycine max HOM05D001186 ORTHO05D000971 2.3e-07 60.1 108 35.2
HanXRQChr12g0364631 Helianthus annuus HOM05D001186 ORTHO05D000971 2.3e-07 60.1 163 33.1
MD16G1041600 Malus domestica HOM05D001186 ORTHO05D000971 2.3e-07 60.1 234 26.5
Nn3g17865 Nelumbo nucifera HOM05D001186 ORTHO05D000971 2.3e-07 60.1 104 34.6
Oeu037616.1 Olea europaea HOM05D001186 ORTHO05D000971 2.3e-07 60.1 78 41.0
Thecc.02G227800 Theobroma cacao HOM05D001186 ORTHO05D000971 2.3e-07 60.1 217 29.5
Aa31LG8G5190 Aethionema arabicum HOM05D001186 ORTHO05D000971 3.0e-07 59.7 105 39.0
Nitab4.5_0001674g0050 Nicotiana tabacum HOM05D001186 ORTHO05D000971 3.0e-07 59.7 139 36.7
Prupe.8G022500 Prunus persica HOM05D001186 ORTHO05D000971 3.0e-07 59.7 79 44.3
AT3G18360 Arabidopsis thaliana HOM05D001186 ORTHO05D000971 3.9e-07 59.3 84 40.5
Dinv28111 Davidia involucrata HOM05D001186 ORTHO05D000971 3.9e-07 59.3 226 29.2
Potri.010G123700 Populus trichocarpa HOM05D001186 ORTHO05D000971 3.9e-07 59.3 240 23.8
Lsat_1_v5_gn_1_8801 Lactuca sativa HOM05D001186 ORTHO05D000971 5.0e-07 58.9 84 41.7
Nn1g06171 Nelumbo nucifera HOM05D001186 ORTHO05D000971 5.0e-07 58.9 72 44.4
Oeu032976.1 Olea europaea HOM05D001186 ORTHO05D000971 5.0e-07 58.9 78 41.0
SalBow7G3795 Salvia bowleyana HOM05D001186 ORTHO05D000971 5.0e-07 58.9 66 45.5
Duzib093G1352 Durio zibethinus HOM05D001186 ORTHO05D000971 6.6e-07 58.5 80 36.2
Glyma.10G273300 Glycine max HOM05D001186 ORTHO05D000971 6.6e-07 58.5 191 30.4
HanXRQChr02g0037451 Helianthus annuus HOM05D001186 ORTHO05D000971 6.6e-07 58.5 84 41.7
Nn5g28668 Nelumbo nucifera HOM05D001186 ORTHO05D000971 6.6e-07 58.5 106 38.7
Actinidia15150 Actinidia chinensis HOM05D001186 ORTHO05D000971 8.6e-07 58.2 80 38.8
Aqoxy3G00278 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 8.6e-07 58.2 221 29.4
Thhalv10022101m.g Eutrema salsugineum HOM05D001186 ORTHO05D000971 8.6e-07 58.2 101 38.6
FAN27G1120 Fragaria x ananassa HOM05D001186 ORTHO05D000971 8.6e-07 58.2 77 42.9
Phvul.009G136500 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 8.6e-07 58.2 71 43.7
ATR0772G190 Amborella trichopoda HOM05D001186 ORTHO05D000971 1.1e-06 57.8 104 34.6
Ciclev10023791m.g Citrus clementina HOM05D001186 ORTHO05D000971 1.1e-06 57.8 189 29.6
Glyma.04G239400 Glycine max HOM05D001186 ORTHO05D000971 1.1e-06 57.8 73 42.5
HPP92_001096 Vanilla planifolia HOM05D001186 ORTHO05D000971 1.1e-06 57.8 79 45.6
Hma1.2p1_0483F.1_g162740 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 1.5e-06 57.4 71 43.7
Lsat_1_v5_gn_9_40280 Lactuca sativa HOM05D001186 ORTHO05D000971 1.5e-06 57.4 87 37.9
Lj1g0004766 Lotus japonicus HOM05D001186 ORTHO05D000971 1.5e-06 57.4 68 44.1
Peaxi162Scf00263g00083 Petunia axillaris HOM05D001186 ORTHO05D000971 1.5e-06 57.4 72 41.7
CSS0038492 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.9e-06 57.0 68 44.1
Cpa.g.c39771 Carica papaya HOM05D001186 ORTHO05D000971 1.9e-06 57.0 119 37.0
Cfa018343 Carpinus fangiana HOM05D001186 ORTHO05D000971 1.9e-06 57.0 72 43.1
Gorai.009G347500 Gossypium raimondii HOM05D001186 ORTHO05D000971 1.9e-06 57.0 98 40.8
Lalb_Chr11g0066501 Lupinus albus HOM05D001186 ORTHO05D000971 1.9e-06 57.0 66 47.0
RcHm_v2.0_Chr6g0276681 Rosa chinensis HOM05D001186 ORTHO05D000971 1.9e-06 57.0 81 43.2
Sabra05G0049800 Salix brachista HOM05D001186 ORTHO05D000971 1.9e-06 57.0 70 47.1
Sp3g16470 Schrenkiella parvula HOM05D001186 ORTHO05D000971 1.9e-06 57.0 109 35.8
FAN20G2326 Fragaria x ananassa HOM05D001186 ORTHO05D000971 2.5e-06 56.6 77 41.6
Glyma.06G124400 Glycine max HOM05D001186 ORTHO05D000971 2.5e-06 56.6 72 43.1
TAR381G0526 Trochodendron aralioides HOM05D001186 ORTHO05D000971 2.5e-06 56.6 77 42.9
BcaC09g48794 Brassica carinata HOM05D001186 ORTHO05D000971 3.3e-06 56.2 140 32.9
C01p45850 Brassica napus HOM05D001186 ORTHO05D000971 3.3e-06 56.2 140 32.9
BolC1t04547H Brassica oleracea HOM05D001186 ORTHO05D000971 3.3e-06 56.2 140 32.9
CiPaw.15G086500 Carya illinoinensis HOM05D001186 ORTHO05D000971 3.3e-06 56.2 88 36.4
Cc10_g14190 Coffea canephora HOM05D001186 ORTHO05D000971 3.3e-06 56.2 67 43.3
Haze_17728 Corylus avellana HOM05D001186 ORTHO05D000971 3.3e-06 56.2 76 43.4
FvH4_2g14340 Fragaria vesca HOM05D001186 ORTHO05D000971 3.3e-06 56.2 77 41.6
FAN15G3153 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.3e-06 56.2 77 41.6
FAN24G3322 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.3e-06 56.2 77 41.6
Gohir.A05G321500 Gossypium hirsutum HOM05D001186 ORTHO05D000971 3.3e-06 56.2 205 29.3
Gohir.D05G323700 Gossypium hirsutum HOM05D001186 ORTHO05D000971 3.3e-06 56.2 93 41.9
Sabra15G0039100 Salix brachista HOM05D001186 ORTHO05D000971 3.3e-06 56.2 170 28.8
PGSC0003DMG400017564 Solanum tuberosum HOM05D001186 ORTHO05D000971 3.3e-06 56.2 76 42.1
A01p35980 Brassica napus HOM05D001186 ORTHO05D000971 4.3e-06 55.8 71 45.1
C05p20190 Brassica napus HOM05D001626 ORTHO05D001563 4.3e-06 55.8 113 33.6
BolC5t30713H Brassica oleracea HOM05D001626 ORTHO05D001563 4.3e-06 55.8 113 33.6
BraA01t03679Z Brassica rapa HOM05D001186 ORTHO05D000971 4.3e-06 55.8 71 45.1
MD05G1018300 Malus domestica HOM05D001186 ORTHO05D000971 4.3e-06 55.8 87 41.4
Solyc06g060470.1 Solanum lycopersicum HOM05D001186 ORTHO05D000971 4.3e-06 55.8 74 40.5
VMungo1309G1275 Vigna mungo HOM05D001186 ORTHO05D000971 4.3e-06 55.8 69 43.5
Migut.J00487 Erythranthe guttata HOM05D001186 ORTHO05D000971 5.6e-06 55.5 94 36.2
Eucgr.F02723 Eucalyptus grandis HOM05D001186 ORTHO05D000971 5.6e-06 55.5 92 35.9
Sabra05G0144600 Salix brachista HOM05D001186 ORTHO05D000971 5.6e-06 55.5 90 34.4
BcaC05g26036 Brassica carinata HOM05D001186 ORTHO05D000971 7.3e-06 55.1 113 33.6
DCAR_001357 Daucus carota HOM05D001186 ORTHO05D000971 7.3e-06 55.1 68 39.7
Dinv25835 Davidia involucrata HOM05D001186 ORTHO05D000971 7.3e-06 55.1 72 40.3
Gohir.D08G105100 Gossypium hirsutum HOM05D001186 ORTHO05D000971 7.3e-06 55.1 218 29.4
Psat5g080400 Pisum sativum HOM05D001186 ORTHO05D000971 7.3e-06 55.1 110 33.6
Potri.002G070600 Populus trichocarpa HOM05D001186 ORTHO05D000971 7.3e-06 55.1 102 32.4
Sopen06g020590 Solanum pennellii HOM05D001186 ORTHO05D000971 7.3e-06 55.1 72 41.7
SGA_v2.0_scaffold38G14938 Striga asiatica HOM05D001186 ORTHO05D000971 7.3e-06 55.1 131 32.8
PGR119G2222 Punica granatum HOM05D001186 ORTHO05D000971 9.5e-06 54.7 228 30.3
THA.LOC104812050 Tarenaya hassleriana HOM05D001186 ORTHO05D000971 9.5e-06 54.7 82 41.5


User provided reference genes

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