Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 4.8e-70 267.7 134 100.0
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 1.8e-61 239.2 134 86.6
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 2.0e-60 235.7 132 85.6
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 2.2e-59 232.3 130 86.2
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 5.0e-59 231.1 132 85.6
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 6.5e-59 230.7 131 86.3
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 6.5e-59 230.7 130 85.4
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 1.1e-58 229.9 132 84.1
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 1.5e-58 229.6 130 85.4
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.5e-58 229.6 131 84.7
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 3.2e-58 228.4 130 85.4
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 5.5e-58 227.6 132 84.8
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 9.4e-58 226.9 134 81.3
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 9.4e-58 226.9 132 81.1
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 1.6e-57 226.1 132 80.3
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 2.7e-57 225.3 130 85.4
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 3.6e-57 224.9 113 98.2
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 4.7e-57 224.6 130 83.1
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 4.7e-57 224.6 130 83.1
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 4.7e-57 224.6 130 83.1
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 8.0e-57 223.8 132 81.8
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 8.0e-57 223.8 132 82.6
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 1.4e-56 223.0 134 81.3
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 84.2
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 5.2e-56 221.1 132 79.5
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 8.8e-56 220.3 132 79.5
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 8.8e-56 220.3 132 80.3
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 8.8e-56 220.3 132 81.1
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.5e-55 219.5 132 79.5
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 7.5e-55 217.2 134 79.1
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 9.8e-55 216.9 130 79.2
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 1.7e-54 216.1 132 78.0
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 2.2e-54 215.7 132 78.8
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 2.8e-54 215.3 132 78.8
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 2.8e-54 215.3 132 79.5
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 6.3e-54 214.2 132 78.8
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 8.3e-54 213.8 139 77.7
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 8.3e-54 213.8 130 78.5
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.1e-53 213.4 132 78.8
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.4e-53 213.0 132 79.5
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 1.8e-53 212.6 132 78.0
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 4.1e-53 211.5 132 78.8
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 5.4e-53 211.1 132 78.8
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 7.0e-53 210.7 132 77.3
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 1.6e-52 209.5 132 76.5
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.3e-51 206.5 196 60.7
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.1e-50 203.4 132 74.2
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 3.2e-50 201.8 138 74.6
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 9.4e-50 200.3 128 75.0
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 2.1e-49 199.1 127 74.8
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 4.0e-48 194.9 132 71.2
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 5.2e-48 194.5 180 58.9
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 6.8e-48 194.1 132 72.7
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 1.2e-47 193.4 128 71.9
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 1.2e-47 193.4 115 80.0
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.2e-47 193.4 118 76.3
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 1.5e-47 193.0 132 68.2
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 1.5e-47 193.0 132 68.2
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 2.0e-47 192.6 132 68.9
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 2.0e-47 192.6 116 79.3
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 2.6e-47 192.2 132 68.9
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 3.4e-47 191.8 175 57.7
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 5.7e-47 191.0 132 68.2
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 9.8e-47 190.3 133 72.2
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.8e-46 188.7 133 71.4
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 3.7e-46 188.3 132 68.2
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.1e-45 186.8 130 67.7
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 1.8e-45 186.0 132 68.2
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 1.2e-44 183.3 130 66.2
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 2.7e-44 182.2 121 71.9
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 1.0e-43 180.3 114 76.3
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 3.3e-42 175.3 136 62.5
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 1.2e-41 173.3 133 62.4
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 1.6e-41 172.9 123 66.7
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.0e-40 170.2 100 82.0
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 2.3e-40 169.1 105 76.2
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.5e-39 166.4 105 75.2
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 9.8e-39 163.7 102 74.5
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 2.2e-38 162.5 105 70.5
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 2.2e-38 162.5 103 73.8
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 3.7e-38 161.8 121 62.0
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 3.7e-38 161.8 128 61.7
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 4.1e-37 158.3 105 71.4
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 4.1e-37 158.3 97 77.3
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 7.0e-37 157.5 92 79.3
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.2e-31 140.2 132 60.6
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 1.2e-31 140.2 132 61.4
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 9.8e-31 137.1 122 54.9
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 3.5e-28 128.6 110 51.8
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 8.1e-25 117.5 111 52.3
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 4.0e-24 115.2 70 80.0
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 2.2e-22 109.4 102 52.0
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.1e-21 107.1 118 49.2
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 3.2e-21 105.5 65 76.9
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 6.0e-20 101.3 109 49.5
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 2.5e-18 95.9 133 38.3
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 6.2e-17 91.3 61 68.9
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 8.6e-11 70.9 70 51.4
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.9e-10 69.7 83 43.4
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 4.3e-10 68.6 47 63.8
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 2.8e-09 65.9 96 39.6
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 6.8e-08 61.2 35 80.0
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 3.4e-07 58.9 36 66.7
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 6.4e-06 54.7 34 58.8


User provided reference genes

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