Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0112700 Rhododendron simsii HOM05D008614 ORTHO05D010420 5.3e-86 321.2 192 100.0
Rhsim10G0190400 Rhododendron simsii HOM05D008614 ORTHO05D010420 2.4e-83 312.4 192 97.4
Actinidia22866 Actinidia chinensis HOM05D008614 ORTHO05D010420 1.1e-30 137.5 185 59.5
Dinv19115 Davidia involucrata HOM05D008614 ORTHO05D010420 2.2e-23 113.2 182 52.2
Dinv40227 Davidia involucrata HOM05D008614 ORTHO05D010420 4.8e-23 112.1 182 52.2
TAR376G0905 Trochodendron aralioides HOM05D008614 ORTHO05D010420 9.5e-19 97.8 188 42.0
Hma1.2p1_0034F.1_g021610 Hydrangea macrophylla HOM05D008614 ORTHO05D010420 1.4e-17 94.0 150 50.0
Oeu000527.1 Olea europaea HOM05D008614 ORTHO05D010420 1.1e-14 84.3 185 36.8
Potri.011G146000 Populus trichocarpa HOM05D008614 ORTHO05D010420 3.1e-14 82.8 176 40.9
Potri.001G456100 Populus trichocarpa HOM05D008614 ORTHO05D010420 5.9e-13 78.6 177 40.1
Migut.K00408 Erythranthe guttata HOM05D008614 ORTHO05D010420 2.9e-12 76.3 123 41.5
MBI04_g42539_MAGBIO Magnolia biondii HOM05D008614 ORTHO05D010420 4.3e-11 72.4 120 43.3
TWI60G1637 Tripterygium wilfordii HOM05D008614 ORTHO05D010420 7.3e-11 71.6 174 33.3
Glyma.09G195300 Glycine max HOM05D008614 ORTHO05D010420 2.1e-10 70.1 130 35.4
Nitab4.5_0000235g0030 Nicotiana tabacum HOM05D008614 ORTHO05D010420 4.7e-10 68.9 156 45.5
MD15G1227100 Malus domestica HOM05D008614 ORTHO05D010420 6.1e-10 68.6 132 37.1
Peaxi162Scf00981g00031 Petunia axillaris HOM05D008614 ORTHO05D010420 3.1e-09 66.2 151 33.8
ECA246G3890 Erigeron canadensis HOM05D008614 ORTHO05D010420 1.2e-08 64.3 75 49.3
SGA_v2.0_scaffold183G39898 Striga asiatica HOM05D008614 ORTHO05D010420 1.2e-08 64.3 90 51.1
Ciclev10002723m.g Citrus clementina HOM05D008614 ORTHO05D010420 2.0e-08 63.5 78 43.6
Lsat_1_v5_gn_3_68380 Lactuca sativa HOM05D008614 ORTHO05D010420 2.0e-08 63.5 54 57.4
Lj2A507G42 Lonicera japonica HOM05D008614 ORTHO05D010420 2.0e-08 63.5 95 44.2
PGR102G2725 Punica granatum HOM05D008614 ORTHO05D010420 3.4e-08 62.8 131 37.4
Thecc.01G001000 Theobroma cacao HOM05D008614 ORTHO05D010420 3.4e-08 62.8 95 45.3
Sopen02g017350 Solanum pennellii HOM05D008614 ORTHO05D010420 3.7e-07 59.3 105 40.0
DCAR_014125 Daucus carota HOM05D008614 ORTHO05D010420 6.4e-07 58.5 92 44.6
Dinv28292 Davidia involucrata HOM05D007975 ORTHO05D010011 3.2e-06 56.2 169 40.8
FAN23G1636 Fragaria x ananassa HOM05D008614 ORTHO05D010420 3.2e-06 56.2 53 58.5
Prupe.7G188200 Prunus persica HOM05D008614 ORTHO05D010420 3.2e-06 56.2 116 38.8
FAN19G2600 Fragaria x ananassa HOM05D008614 ORTHO05D010420 4.1e-06 55.8 53 56.6
FAN23G2016 Fragaria x ananassa HOM05D008614 ORTHO05D010420 4.1e-06 55.8 53 56.6
FAN26G1944 Fragaria x ananassa HOM05D008614 ORTHO05D010420 4.1e-06 55.8 53 56.6


User provided reference genes

Program Settings