Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.5e-213 744.2 420 100.0
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-58 228.8 427 38.6
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-55 221.5 351 40.2
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.4e-54 218.0 401 37.4
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-51 206.5 384 39.6
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 5.4e-51 206.1 458 34.3
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.5e-48 198.0 337 38.3
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 9.2e-43 178.7 389 35.5
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.0e-42 176.0 258 42.6
RhsimUnG0134700 Rhododendron simsii HOM05D024557 ORTHO05D010234 8.4e-36 155.6 155 80.0
RhsimUnG0063900 Rhododendron simsii HOM05D024557 ORTHO05D010234 5.4e-35 152.9 155 78.7
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.0e-30 136.7 253 33.2
Rhsim12G0134900 Rhododendron simsii HOM05D024557 ORTHO05D010234 9.0e-30 135.6 89 86.5
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.7e-28 131.3 253 33.6
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.8e-28 130.2 254 31.9
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 9.3e-27 125.6 230 33.0
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.5e-26 123.6 196 38.3
Rhsim05G0127300 Rhododendron simsii HOM05D024557 ORTHO05D010234 4.6e-26 123.2 418 39.0
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.3e-24 117.1 323 30.3
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.6e-21 105.9 295 27.1
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.8e-20 103.6 297 26.9
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-20 103.6 334 28.7
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.5e-18 97.1 359 24.5
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.0e-17 95.5 294 23.1
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.9e-17 93.6 330 23.9
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.7e-17 92.8 388 24.2
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.1e-16 92.0 153 38.6
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.9e-16 91.3 362 30.7
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.4e-14 85.1 350 23.7
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.8e-14 84.7 134 38.1
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-14 83.6 174 39.1
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.6e-13 80.9 165 29.7
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-13 80.9 153 36.6
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 7.6e-13 79.3 158 30.4
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 7.6e-13 79.3 194 26.8
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 7.6e-13 79.3 194 26.8
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 7.6e-13 79.3 194 26.8
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.7e-12 78.2 258 24.4
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.2e-11 73.6 222 26.1
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 4.2e-11 73.6 263 22.1
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.6e-10 71.6 101 31.7
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 4.6e-10 70.1 208 25.0
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 4.6e-10 70.1 208 25.0
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 2.3e-09 67.8 126 40.5
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 2.3e-09 67.8 195 29.2
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.1e-08 65.5 352 29.8
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.9e-08 64.7 365 22.7
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 5.6e-08 63.2 222 25.7
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.6e-08 63.2 404 23.3
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-08 62.8 400 22.8
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.6e-07 61.6 334 24.0
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-07 61.2 380 22.9
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-07 61.2 380 22.9
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-07 61.2 380 22.9
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 2.8e-07 60.8 272 22.1
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 2.8e-07 60.8 272 22.1
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.8e-07 60.8 334 24.0
CANSAT01G2686 Cannabis sativa HOM05D009677 ORTHO05D011883 4.8e-07 60.1 275 24.0
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.8e-07 60.1 390 22.3
CSS0007087 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.2e-07 59.7 47 55.3
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 6.2e-07 59.7 105 38.1
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.2e-07 59.7 379 22.4
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 8.2e-07 59.3 108 33.3
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 8.2e-07 59.3 105 38.1
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.2e-07 59.3 380 22.6
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.1e-06 58.9 335 22.1
Lj4g0027394 Lotus japonicus HOM05D008291 ORTHO05D003568 1.1e-06 58.9 267 21.7
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 1.4e-06 58.5 349 23.2
CSS0015616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.4e-06 57.8 48 52.1
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.4e-06 57.8 380 22.6
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 2.4e-06 57.8 209 23.9
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.1e-06 57.4 111 32.4
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.1e-06 57.4 398 22.1
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 4.0e-06 57.0 102 37.3
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 5.3e-06 56.6 222 24.3


User provided reference genes

Program Settings