Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 2.6e-138 495.4 243 100.0
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 6.4e-89 331.3 209 79.4
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.6e-87 326.6 206 75.2
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 2.1e-87 326.2 199 79.4
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 7.9e-87 324.3 210 72.9
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 7.9e-87 324.3 205 75.1
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 1.0e-86 323.9 207 75.4
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 6.7e-86 321.2 219 70.8
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 3.3e-85 318.9 216 71.8
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 4.8e-84 315.1 214 72.4
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 5.3e-83 311.6 208 72.1
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 9.0e-83 310.8 220 70.9
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.3e-81 307.0 208 70.2
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 2.2e-81 306.2 239 63.6
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.6e-79 300.1 206 69.9
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 6.0e-79 298.1 215 67.4
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 1.0e-78 297.4 206 67.5
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 1.3e-78 297.0 209 68.4
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 1.3e-78 297.0 204 69.1
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 1.8e-78 296.6 209 69.4
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 3.9e-78 295.4 204 69.1
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 6.7e-78 294.7 206 69.9
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.5e-77 293.5 204 68.6
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.5e-77 293.5 206 69.9
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.9e-77 293.1 213 68.1
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 4.3e-77 292.0 204 68.1
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 7.4e-77 291.2 213 67.6
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 2.1e-76 289.7 209 66.5
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 8.2e-76 287.7 213 66.2
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.1e-75 287.3 180 75.0
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 1.8e-75 286.6 176 84.1
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 6.9e-75 284.6 231 60.2
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 2.0e-74 283.1 231 61.9
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 4.5e-74 282.0 208 67.3
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 1.7e-73 280.0 207 65.2
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.1e-72 277.3 218 62.8
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 2.5e-72 276.2 204 64.2
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 9.3e-72 274.2 211 67.8
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 2.7e-71 272.7 203 62.6
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 4.6e-71 271.9 216 64.8
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.9e-71 271.2 215 65.1
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.8e-70 270.0 212 65.6
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 3.9e-70 268.9 214 63.1
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.9e-70 268.9 211 64.5
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 6.7e-70 268.1 208 61.5
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 8.7e-70 267.7 210 61.0
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 1.3e-68 263.8 210 62.9
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 1.6e-68 263.5 217 60.4
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 2.2e-68 263.1 208 63.0
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 4.1e-67 258.8 211 61.1
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 9.0e-67 257.7 213 60.6
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 9.0e-67 257.7 206 60.2
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 9.0e-67 257.7 211 61.1
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 9.0e-67 257.7 214 61.2
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 1.2e-66 257.3 237 57.4
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.5e-66 256.9 216 59.3
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 2.6e-66 256.1 208 63.0
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 5.9e-66 255.0 202 61.9
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 7.7e-66 254.6 213 61.5
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 7.7e-66 254.6 211 60.7
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 1.3e-65 253.8 221 62.4
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.3e-65 253.8 211 60.2
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.3e-65 253.8 211 60.2
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 2.2e-65 253.1 214 61.2
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.2e-65 253.1 243 58.4
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 2.9e-65 252.7 209 59.8
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 3.8e-65 252.3 222 59.9
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 5.5e-64 248.4 170 71.2
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 9.4e-64 247.7 210 61.0
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 9.4e-64 247.7 208 61.5
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.2e-63 247.3 211 60.7
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 1.6e-63 246.9 214 59.3
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 6.1e-63 245.0 213 59.6
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.4e-62 243.8 214 57.9
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 8.8e-62 241.1 254 53.9
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 3.3e-61 239.2 212 60.8
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 5.7e-61 238.4 179 64.8
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 5.7e-61 238.4 212 61.3
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 7.4e-61 238.0 205 59.5
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 2.2e-60 236.5 264 51.9
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 8.2e-60 234.6 162 69.8
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 4.1e-59 232.3 202 56.4
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 5.9e-58 228.4 207 58.0
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 3.8e-57 225.7 150 68.7
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 3.8e-57 225.7 216 56.5
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 4.2e-56 222.2 210 54.3
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 9.4e-56 221.1 197 56.3
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 1.0e-54 217.6 177 58.8
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 4.4e-53 212.2 171 62.6
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 6.3e-52 208.4 190 57.4
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-51 207.6 172 61.0
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 5.9e-50 201.8 213 50.7
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-48 197.6 162 60.5
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 6.1e-47 191.8 208 51.4
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 4.8e-44 182.2 238 41.2
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.4e-43 179.9 151 62.9
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 2.4e-43 179.9 125 65.6
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 4.1e-43 179.1 200 50.5
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.2e-41 173.3 143 63.6
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 2.4e-35 153.3 197 42.6
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 2.4e-35 153.3 211 40.8
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 9.1e-35 151.4 115 61.7
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 5.5e-32 142.1 129 58.9
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 6.1e-31 138.7 177 41.8
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 1.8e-22 110.5 59 83.1
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.8e-21 104.8 71 69.0
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 9.2e-19 98.2 69 69.6
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 1.0e-17 94.7 148 33.1
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 2.5e-16 90.1 106 47.2
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 4.4e-13 79.3 78 50.0
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 7.5e-13 78.6 97 46.4
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 3.7e-12 76.3 151 33.8
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.6e-10 69.3 51 70.6
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 6.0e-10 68.9 174 28.7
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.1e-08 64.7 92 43.5
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.2e-07 61.2 37 64.9
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.8e-07 60.1 38 60.5
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 6.2e-07 58.9 36 63.9
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 1.1e-06 58.2 41 56.1
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.1e-06 56.6 147 30.6
QL12p005529 Quercus lobata HOM05D002896 ORTHO05D003263 5.2e-06 55.8 41 70.7


User provided reference genes

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