Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0118300 Rhododendron simsii HOM05D009163 ORTHO05D010445 1.1e-81 307.8 338 100.0
RhsimUnG0100100 Rhododendron simsii HOM05D009163 ORTHO05D010445 1.1e-81 307.8 338 100.0
vmacro17825 Vaccinium macrocarpon HOM05D009163 ORTHO05D010445 1.8e-33 147.5 342 58.8
Actinidia19192 Actinidia chinensis HOM05D009163 ORTHO05D010445 2.8e-26 123.6 107 60.7
Dinv13520 Davidia involucrata HOM05D009163 ORTHO05D010445 2.0e-19 100.9 198 36.4
CiPaw.01G040400 Carya illinoinensis HOM05D009163 ORTHO05D010445 8.3e-18 95.5 84 54.8
CiPaw.11G175700 Carya illinoinensis HOM05D009163 ORTHO05D010445 1.1e-17 95.1 175 35.4
Nitab4.5_0000344g0220 Nicotiana tabacum HOM05D012291 ORTHO05D010445 1.7e-15 87.8 107 48.6
CSS0029219 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 2.9e-15 87.0 185 54.6
CSS0010032 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 2.5e-14 84.0 187 55.1
ClCG07G008530 Citrullus lanatus HOM05D015520 ORTHO05D010445 3.3e-14 83.6 108 41.7
Sabra05G0100500 Salix brachista HOM05D009163 ORTHO05D010445 3.3e-14 83.6 106 44.3
Potri.007G024000 Populus trichocarpa HOM05D009163 ORTHO05D010445 7.2e-14 82.4 98 45.9
Oeu042269.2 Olea europaea HOM05D009163 ORTHO05D010445 2.1e-13 80.9 97 45.4
Potri.005G122400 Populus trichocarpa HOM05D009163 ORTHO05D010445 6.1e-13 79.3 92 45.7
GSVIVG01018946001 Vitis vinifera HOM05D009163 ORTHO05D010445 6.1e-13 79.3 101 45.5
MELO3C016387.2 Cucumis melo HOM05D015520 ORTHO05D010445 2.6e-11 73.9 107 37.4
CsaV3_4G005610 Cucumis sativus L. HOM05D015520 ORTHO05D010445 5.7e-11 72.8 107 35.5
Oeu033653.1 Olea europaea HOM05D009163 ORTHO05D010445 1.7e-10 71.2 97 45.4
TWI09G1297 Tripterygium wilfordii HOM05D009163 ORTHO05D010445 6.3e-10 69.3 88 45.5
Migut.H00982 Erythranthe guttata HOM05D009163 ORTHO05D010445 1.1e-09 68.6 91 41.8
Nitab4.5_0000178g0120 Nicotiana tabacum HOM05D012291 ORTHO05D010445 3.1e-09 67.0 101 43.6
MSTRG.15269 Avicennia marina HOM05D009163 ORTHO05D010445 2.9e-07 60.5 93 38.7
MELO3C016385.2 Cucumis melo HOM05D015520 ORTHO05D010445 2.9e-07 60.5 103 35.0
Sed0013344 Sechium edule HOM05D015520 ORTHO05D010445 2.9e-07 60.5 105 36.2
Cc07_g09620 Coffea canephora HOM05D009163 ORTHO05D010445 3.8e-07 60.1 40 60.0
PSO675G5326 Papaver somniferum HOM05D009163 ORTHO05D010445 6.6e-07 59.3 107 37.4
PGSC0003DMG400003600 Solanum tuberosum HOM05D012291 ORTHO05D010445 6.6e-07 59.3 76 42.1
Nitab4.5_0001960g0040 Nicotiana tabacum HOM05D012291 ORTHO05D010445 1.5e-06 58.2 84 39.3
Cpa.g.sc6.122 Carica papaya HOM05D009163 ORTHO05D010445 1.9e-06 57.8 90 35.6
PSO541G2773 Papaver somniferum HOM05D009163 ORTHO05D010445 3.3e-06 57.0 103 38.8
QL06p046412 Quercus lobata HOM05D009163 ORTHO05D010445 4.3e-06 56.6 107 37.4
Nitab4.5_0003232g0030 Nicotiana tabacum HOM05D012291 ORTHO05D010445 5.6e-06 56.2 76 44.7


User provided reference genes

Program Settings