Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-138 494.6 247 100.0
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-34 150.2 97 73.2
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-33 147.9 97 72.2
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 8.7e-33 144.8 97 66.0
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-29 134.4 97 66.0
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.2e-29 134.4 97 66.0
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-29 133.7 97 64.9
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-29 133.3 97 64.9
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.8e-29 132.1 97 64.9
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.9e-29 131.3 97 63.9
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-28 131.0 97 62.9
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-28 130.6 97 63.9
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-27 127.9 97 64.9
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-27 127.9 88 65.9
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.1e-27 125.2 110 52.7
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-26 122.9 110 52.7
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-26 122.9 110 52.7
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-26 122.9 110 52.7
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-25 120.2 97 62.9
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-23 114.0 110 47.3
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-23 112.5 107 48.6
Rhsim08G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.9e-20 102.4 65 75.4
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.5e-18 96.3 97 48.5
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.0e-17 93.2 118 40.7
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.0e-17 93.2 118 40.7
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-17 92.8 62 74.2
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-17 92.8 118 40.7
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 6.7e-17 92.0 128 36.7
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-17 92.0 118 40.7
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.7e-17 91.7 118 39.8
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-16 90.5 103 43.7
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.5e-16 90.1 102 42.2
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.3e-16 89.7 108 39.8
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.3e-16 89.4 101 41.6
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.3e-15 87.8 93 44.1
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-15 87.8 116 39.7
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.1e-15 87.0 108 38.9
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.3e-15 85.5 93 43.0
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.3e-15 85.5 94 44.7
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.2e-15 85.1 100 40.0
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.1e-14 82.8 114 36.8
Rhsim07G0128100 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-14 82.0 106 39.6
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 9.0e-14 81.6 114 36.0
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.0e-14 81.6 114 36.0
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-13 81.3 114 36.0
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-13 81.3 68 52.9
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-13 80.9 114 36.0
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.0e-13 80.5 127 36.2
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-13 80.1 100 42.0
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.3e-12 77.8 110 32.7
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.3e-12 77.8 110 31.8
Rhsim07G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-12 77.4 53 62.3
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.8e-12 76.3 122 36.1
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.5e-12 75.5 110 30.9
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.5e-12 75.5 114 36.8
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.5e-12 75.5 123 35.8
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 8.4e-12 75.1 110 30.9
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.4e-12 75.1 122 36.1
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.9e-11 73.9 95 35.8
Actinidia12982 Actinidia chinensis HOM05D007376 ORTHO05D001590 2.5e-11 73.6 82 45.1
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.2e-11 73.2 95 33.7
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-11 72.4 93 38.7
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.5e-11 72.4 95 33.7
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.2e-11 72.0 113 34.5
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.3e-11 71.6 95 33.7
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.3e-11 71.6 124 29.8
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.3e-11 71.6 95 34.7
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.3e-11 71.6 115 36.5
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-10 71.2 121 31.4
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-10 70.1 121 30.6
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-10 70.1 121 30.6
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-10 70.1 121 30.6
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-10 70.1 121 30.6
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-10 70.1 121 30.6
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-10 70.1 121 30.6
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.6e-10 69.3 114 31.6
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-09 68.2 98 36.7
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.8e-09 67.4 115 36.5
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 1.8e-09 67.4 97 35.1
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.8e-09 67.4 92 35.9
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 2.3e-09 67.0 97 32.0
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.9e-09 66.2 136 27.9
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 3.9e-09 66.2 97 35.1
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.1e-09 65.9 97 35.1
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.1e-09 65.9 97 35.1
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 3.3e-08 63.2 65 46.2
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.3e-08 62.8 126 28.6
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.3e-08 62.8 88 35.2
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.7e-08 62.4 132 31.8
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 5.7e-08 62.4 82 39.0
FvH4_1g20524 Fragaria vesca HOM05D001313 ORTHO05D001590 7.4e-08 62.0 148 29.7
FvH4_4g08592 Fragaria vesca HOM05D001313 ORTHO05D001590 9.7e-08 61.6 118 30.5
MBI01_g19130_MAGBIO Magnolia biondii HOM05D029362 ORTHO05D022891 1.3e-07 61.2 92 35.9
Actinidia09092 Actinidia chinensis HOM05D026250 ORTHO05D026319 1.6e-07 60.8 101 29.7
FvH4_2g03221 Fragaria vesca HOM05D001313 ORTHO05D001590 1.6e-07 60.8 118 31.4
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.2e-07 60.5 96 32.3
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 3.7e-07 59.7 54 46.3
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.8e-07 59.3 107 27.1
FvH4_1g24741 Fragaria vesca HOM05D001313 ORTHO05D001590 4.8e-07 59.3 118 33.1
FvH4_6g20370 Fragaria vesca HOM05D001313 ORTHO05D001590 4.8e-07 59.3 118 30.5
FAN18G1148 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.8e-07 59.3 84 32.1
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 4.8e-07 59.3 85 35.3
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 4.8e-07 59.3 75 36.0
FvH4_3g30870 Fragaria vesca HOM05D001313 ORTHO05D001590 6.3e-07 58.9 118 32.2
FvH4_4g17740 Fragaria vesca HOM05D001313 ORTHO05D001590 6.3e-07 58.9 118 30.5
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 6.3e-07 58.9 107 34.6
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 6.3e-07 58.9 88 36.4
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 6.3e-07 58.9 88 36.4
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 6.3e-07 58.9 88 36.4
FAN06G4349 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.2e-07 58.5 118 28.0
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 8.2e-07 58.5 76 35.5
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 8.2e-07 58.5 107 29.9
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 8.2e-07 58.5 64 39.1
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 8.2e-07 58.5 64 39.1
FvH4_1g28820 Fragaria vesca HOM05D001313 ORTHO05D001590 1.1e-06 58.2 118 30.5
FvH4_2g01890 Fragaria vesca HOM05D001313 ORTHO05D001590 1.1e-06 58.2 118 30.5
FvH4_3g31130 Fragaria vesca HOM05D001313 ORTHO05D001590 1.1e-06 58.2 118 30.5
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.1e-06 58.2 54 44.4
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.1e-06 58.2 89 37.1
Lj5A81T87 Lonicera japonica HOM05D053520 ORTHO05D001590 1.4e-06 57.8 58 37.9
FAN12G2584 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.8e-06 57.4 86 32.6
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 1.8e-06 57.4 56 44.6
FAN02G2220 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.1e-06 56.6 148 28.4
FAN04G0296 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.1e-06 56.6 84 29.8
FAN28G1211 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.1e-06 56.6 84 29.8
PSO675G7395 Papaver somniferum HOM05D008588 ORTHO05D010137 3.1e-06 56.6 84 34.5
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.1e-06 56.6 121 27.3
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.1e-06 56.6 80 31.2
FAN08G0758 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.1e-06 56.2 84 29.8
vmacro04432 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.1e-06 56.2 105 31.4
FAN16G2686 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.3e-06 55.8 84 28.6
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 5.3e-06 55.8 84 33.3
FvH4_5g37521 Fragaria vesca HOM05D001313 ORTHO05D001590 6.9e-06 55.5 114 30.7
FAN02G0597 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN04G0896 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN07G1365 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN11G1661 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN12G3449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN12G3821 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN19G0965 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN19G2309 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN21G2565 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN22G0854 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
FAN22G1831 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-06 55.5 84 28.6
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 6.9e-06 55.5 56 50.0
FvH4_7g08490 Fragaria vesca HOM05D001313 ORTHO05D001590 9.0e-06 55.1 84 28.6
FAN05G5162 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.0e-06 55.1 148 25.0
PSO210G2316 Papaver somniferum HOM05D008588 ORTHO05D010137 9.0e-06 55.1 90 34.4
PSO541G0958 Papaver somniferum HOM05D008588 ORTHO05D010137 9.0e-06 55.1 77 35.1
vmacro21208 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 9.0e-06 55.1 90 31.1


User provided reference genes

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