Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 1.5e-151 539.7 303 100.0
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 3.9e-120 435.3 304 85.2
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 9.1e-109 397.5 303 77.6
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 7.2e-106 387.9 309 75.1
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 2.1e-105 386.3 297 77.1
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 2.3e-91 339.7 293 69.6
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 7.5e-87 324.7 292 66.1
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 2.9e-86 322.8 310 62.9
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 4.1e-85 318.9 293 66.2
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 7.0e-85 318.2 302 66.9
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 4.6e-84 315.5 311 62.4
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 2.3e-83 313.2 310 63.5
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 3.9e-83 312.4 311 62.1
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 2.8e-81 306.2 293 63.5
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 1.4e-80 303.9 295 62.4
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 1.8e-80 303.5 309 61.5
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 1.2e-79 300.8 294 61.6
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 7.5e-79 298.1 311 59.2
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 7.5e-79 298.1 311 58.5
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.3e-78 297.4 290 61.0
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.7e-78 297.0 290 61.7
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 6.4e-78 295.0 306 59.5
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 8.3e-78 294.7 309 58.9
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 1.9e-77 293.5 293 61.4
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.9e-77 293.5 290 61.4
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.4e-77 293.1 310 59.7
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 4.1e-77 292.4 310 59.4
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 9.2e-77 291.2 291 62.9
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 1.6e-76 290.4 304 58.2
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 3.5e-76 289.3 300 61.7
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 4.6e-76 288.9 293 60.1
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 1.3e-75 287.3 305 58.4
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 3.9e-75 285.8 295 60.7
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 6.6e-75 285.0 259 64.5
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.5e-74 283.9 300 58.7
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 1.9e-74 283.5 293 61.1
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 3.3e-74 282.7 304 59.5
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 4.3e-74 282.3 305 59.3
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 5.6e-74 282.0 301 57.8
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 1.2e-71 274.2 311 55.6
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 4.4e-71 272.3 292 56.8
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 8.3e-70 268.1 299 57.2
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 8.3e-70 268.1 307 58.6
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 1.4e-69 267.3 302 57.9
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 3.2e-69 266.2 294 59.2
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 7.1e-69 265.0 309 57.3
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 7.1e-69 265.0 291 57.4
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 1.7e-67 260.4 292 55.1
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 3.9e-67 259.2 291 56.7
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 3.3e-66 256.1 295 58.6
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.2e-65 254.2 256 63.3
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 2.1e-65 253.4 303 56.4
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 2.1e-65 253.4 275 60.7
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 3.6e-65 252.7 267 59.6
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 4.7e-65 252.3 255 61.2
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 6.8e-64 248.4 313 55.3
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.4e-63 246.1 306 55.6
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 9.9e-63 244.6 285 58.6
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 5.4e-61 238.8 303 53.1
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 6.0e-60 235.3 315 52.7
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 6.0e-60 235.3 315 52.7
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 3.0e-59 233.0 238 60.5
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 8.7e-59 231.5 263 56.7
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.2e-55 221.1 290 50.7
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 2.0e-55 220.3 290 51.7
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.9e-53 213.8 226 56.6
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 3.2e-53 213.0 241 57.3
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 3.5e-52 209.5 264 54.9
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 3.5e-52 209.5 260 50.4
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 7.8e-52 208.4 291 48.8
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 6.6e-51 205.3 272 48.5
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 1.1e-50 204.5 257 54.1
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 9.6e-50 201.4 311 46.0
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 2.4e-48 196.8 260 45.0
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 6.9e-48 195.3 235 51.1
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 2.0e-47 193.7 306 45.8
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.5e-47 192.6 260 48.1
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 9.9e-47 191.4 308 45.1
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 2.2e-46 190.3 309 44.3
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 4.9e-46 189.1 289 45.7
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.9e-45 187.2 307 45.6
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 2.4e-45 186.8 288 47.6
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 3.2e-45 186.4 310 45.8
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 3.2e-45 186.4 312 44.2
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 4.2e-45 186.0 287 44.9
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 9.3e-45 184.9 296 45.3
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 2.1e-44 183.7 308 45.8
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 2.7e-44 183.3 308 45.5
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 3.5e-44 183.0 289 46.7
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 6.0e-44 182.2 263 52.5
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.5e-42 177.6 219 57.1
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 5.6e-42 175.6 268 44.8
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 9.6e-42 174.9 286 45.8
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 3.4e-39 166.4 251 52.6
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 7.6e-39 165.2 239 46.0
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 2.2e-38 163.7 213 48.8
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.9e-37 160.6 219 48.9
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 3.2e-37 159.8 206 49.5
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 1.5e-34 151.0 252 42.1
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.0e-30 138.3 78 91.0
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 1.7e-30 137.5 258 43.0
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 4.9e-30 136.0 192 42.2
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 6.5e-30 135.6 190 43.7
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 8.2e-25 118.6 264 36.7
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 7.9e-20 102.1 131 43.5
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 1.9e-18 97.4 288 32.6
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 2.8e-17 93.6 77 67.5
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 6.3e-17 92.4 295 32.5
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 2.4e-16 90.5 265 35.1
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 2.5e-13 80.5 151 37.1
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 3.2e-13 80.1 244 32.8
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 5.5e-13 79.3 149 45.0
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.2e-12 78.2 102 55.9
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.0e-11 75.1 245 32.2
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 8.8e-11 72.0 71 56.3
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 2.0e-10 70.9 288 34.0
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 6.3e-09 65.9 229 31.0
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 5.3e-08 62.8 314 31.8
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 4.5e-07 59.7 298 28.9


User provided reference genes

Program Settings