Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 3.7e-66 254.6 119 100.0
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 2.1e-56 222.2 119 89.9
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 3.3e-46 188.3 118 75.4
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 9.6e-46 186.8 119 69.7
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 1.6e-45 186.0 119 70.6
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 8.1e-45 183.7 119 68.9
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 8.1e-45 183.7 119 68.9
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 1.1e-44 183.3 119 73.1
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 1.8e-44 182.6 119 68.9
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 3.1e-44 181.8 119 68.9
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 4.0e-44 181.4 119 69.7
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 1.2e-43 179.9 119 70.6
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 2.0e-43 179.1 119 71.4
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 2.0e-43 179.1 119 67.2
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 2.6e-43 178.7 118 66.9
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 4.5e-43 177.9 119 67.2
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.7e-42 176.0 119 65.5
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 3.8e-42 174.9 119 64.7
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.9e-42 174.5 119 66.4
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 6.4e-42 174.1 119 68.9
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 8.4e-42 173.7 115 67.0
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 8.4e-42 173.7 119 65.5
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 1.4e-41 172.9 119 65.5
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 3.2e-41 171.8 119 67.2
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 3.2e-41 171.8 119 65.5
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 3.2e-41 171.8 119 65.5
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 3.2e-41 171.8 119 63.9
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 9.3e-41 170.2 119 66.4
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.6e-40 169.5 119 62.2
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 2.1e-40 169.1 119 63.9
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 2.7e-40 168.7 119 65.5
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 4.6e-40 167.9 117 64.1
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.6e-40 167.9 118 63.6
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 6.0e-40 167.5 119 62.2
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.0e-39 166.8 121 65.3
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 1.8e-39 166.0 118 65.3
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 2.3e-39 165.6 119 65.5
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 3.0e-39 165.2 119 63.9
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 3.9e-39 164.9 119 63.0
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 5.1e-39 164.5 119 60.5
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 5.1e-39 164.5 119 62.2
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 5.1e-39 164.5 119 63.0
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 6.7e-39 164.1 119 61.3
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.1e-38 163.3 112 64.3
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.1e-38 163.3 109 67.0
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 2.5e-38 162.2 119 62.2
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 3.3e-38 161.8 119 63.9
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 3.3e-38 161.8 121 62.0
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 5.6e-38 161.0 109 66.1
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 7.4e-38 160.6 119 58.8
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 9.6e-38 160.2 120 58.3
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 1.3e-37 159.8 119 59.7
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 1.3e-37 159.8 119 59.7
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.6e-37 159.5 121 61.2
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 3.7e-37 158.3 119 58.8
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 4.8e-37 157.9 119 58.8
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 8.1e-37 157.1 119 58.0
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 1.1e-36 156.8 119 58.0
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.4e-36 156.4 119 57.1
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 1.8e-36 156.0 119 60.5
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 1.8e-36 156.0 119 56.3
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 3.1e-36 155.2 119 62.2
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 6.9e-36 154.1 119 62.2
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.2e-35 153.3 119 58.0
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 1.5e-35 152.9 119 56.3
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 2.0e-35 152.5 110 60.9
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 5.8e-35 151.0 121 56.2
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 7.6e-35 150.6 119 56.3
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 7.6e-35 150.6 119 56.3
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.0e-34 150.2 102 66.7
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 1.3e-34 149.8 119 57.1
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 2.2e-34 149.1 119 52.9
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 6.5e-34 147.5 119 55.5
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 6.5e-34 147.5 119 55.5
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 1.1e-33 146.7 119 57.1
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 7.1e-33 144.1 119 58.0
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 3.5e-32 141.7 71 83.1
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 4.6e-32 141.4 117 58.1
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.3e-31 139.8 119 52.9
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.3e-31 139.8 119 52.9
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 6.7e-31 137.5 113 57.5
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 1.5e-30 136.3 119 52.1
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 7.4e-30 134.0 105 54.3
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 6.2e-29 131.0 120 55.0
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.4e-28 129.8 118 51.7
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 2.5e-25 119.0 118 44.1
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.2e-21 105.9 89 55.1
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 8.2e-21 104.0 118 38.1
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 5.0e-18 94.7 124 36.3
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.7e-16 89.0 78 52.6
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.8e-12 76.3 67 53.7
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 6.9e-12 74.3 35 85.7
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.2e-11 73.6 105 35.2
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 7.7e-11 70.9 119 35.3
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 4.2e-09 65.1 63 44.4
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 2.3e-07 59.3 42 57.1


User provided reference genes

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