Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0084500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-60 235.3 115 100.0
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-45 184.1 102 85.3
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 2.3e-44 182.2 102 84.3
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-32 142.9 79 84.8
Rhsim01G0158100 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.8e-28 129.4 73 83.6
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 3.9e-28 128.3 102 64.7
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-23 112.8 63 85.7
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-17 92.0 101 44.6
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-16 89.7 100 40.0
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-16 89.7 101 44.6
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-16 89.7 100 40.0
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-16 89.7 100 42.0
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.6e-16 89.0 101 39.6
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-16 88.2 100 41.0
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-16 88.2 100 41.0
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-16 88.2 100 41.0
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-15 87.0 101 43.6
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-15 86.7 101 43.6
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-15 86.7 101 43.6
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.8e-15 85.1 107 38.3
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-15 84.7 100 38.0
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-14 83.6 107 39.3
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.9e-14 82.8 107 42.1
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-14 82.0 101 41.6
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.5e-14 81.3 107 38.3
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.2e-14 80.9 109 38.5
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.4e-14 80.5 107 40.2
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.7e-13 79.0 107 36.4
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-13 78.2 81 45.7
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.1e-13 77.8 86 41.9
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-12 77.0 112 31.2
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.3e-12 75.9 85 36.5
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-12 75.9 86 40.7
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-12 75.9 86 40.7
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-12 75.9 86 40.7
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-12 75.1 86 39.5
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.7e-12 74.3 102 35.3
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-11 73.6 100 36.0
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.0e-11 72.8 84 40.5
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-11 71.2 107 35.5
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.7e-11 70.5 107 33.6
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.8e-10 68.9 112 37.5
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-10 68.9 86 39.5
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.8e-10 68.9 109 33.9
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 3.7e-10 68.6 100 33.0
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.8e-10 68.2 100 35.0
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 6.3e-10 67.8 100 33.0
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.3e-10 67.8 67 43.3
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.1e-09 67.0 111 35.1
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 1.4e-09 66.6 104 39.4
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.8e-09 66.2 111 37.8
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 1.8e-09 66.2 103 35.0
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.4e-09 65.9 82 36.6
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.1e-09 65.5 85 31.8
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.1e-09 65.5 85 31.8
Rhsim03G0174200 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-09 64.3 97 33.0
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 9.1e-09 63.9 82 35.4
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-08 63.5 85 31.8
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.5e-08 63.2 101 34.7
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.6e-08 62.4 74 39.2
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 3.4e-08 62.0 69 37.7
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.4e-08 62.0 83 37.3
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-08 61.6 70 38.6
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.9e-08 61.2 100 36.0
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.0e-07 60.5 82 35.4
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.0e-07 60.5 102 31.4
Rhsim08G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-07 60.5 63 42.9
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 2.2e-07 59.3 97 34.0
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.9e-07 58.9 101 31.7
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.8e-07 58.5 78 35.9
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.8e-07 58.5 96 35.4
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 5.0e-07 58.2 69 40.6
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 8.5e-07 57.4 72 40.3
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.5e-07 57.4 72 40.3
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.5e-07 57.4 72 40.3
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.5e-07 57.4 72 40.3
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 8.5e-07 57.4 108 30.6
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 8.5e-07 57.4 108 30.6
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 8.5e-07 57.4 108 30.6
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 1.1e-06 57.0 93 32.3
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 4.2e-06 55.1 75 40.0
Rhsim08G0004600 Rhododendron simsii HOM05D007376 ORTHO05D338607 4.2e-06 55.1 58 44.8
vmacro05246 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.2e-06 55.1 102 35.3
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 7.2e-06 54.3 69 37.7
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 9.4e-06 53.9 73 31.5
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 9.4e-06 53.9 69 36.2
vmacro19840 Vaccinium macrocarpon HOM05D007376 ORTHO05D018824 9.4e-06 53.9 109 31.2


User provided reference genes

Program Settings