Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.9e-145 519.2 273 100.0
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.3e-127 459.1 256 95.3
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.8e-95 353.2 269 74.7
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.1e-92 342.4 186 98.4
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.2e-56 224.2 192 68.8
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 8.7e-42 174.9 246 49.6
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 9.6e-41 171.4 224 52.7
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.7e-37 160.6 255 44.3
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 8.4e-37 158.3 183 55.7
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 9.3e-36 154.8 223 47.1
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 7.8e-35 151.8 144 58.3
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.0e-34 151.4 122 71.3
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.0e-34 151.4 99 81.8
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.0e-34 151.4 232 44.8
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.3e-34 151.0 283 42.0
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.3e-34 151.0 231 46.3
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.9e-34 149.4 128 60.9
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 6.6e-34 148.7 240 46.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 8.7e-34 148.3 129 60.5
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.1e-33 147.9 91 83.5
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.9e-33 147.1 179 55.3
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.9e-33 147.1 124 65.3
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 2.5e-33 146.7 164 51.8
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 3.3e-33 146.4 178 55.1
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 4.3e-33 146.0 102 70.6
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 4.3e-33 146.0 102 72.5
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 5.6e-33 145.6 150 56.0
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 5.6e-33 145.6 158 55.1
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.3e-32 144.4 156 55.1
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.6e-32 144.1 178 52.2
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.6e-32 144.1 206 48.1
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.8e-32 143.3 178 52.2
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 3.6e-32 142.9 102 67.6
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 4.8e-32 142.5 114 66.7
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 4.8e-32 142.5 248 46.0
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 4.8e-32 142.5 186 53.2
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 6.2e-32 142.1 119 64.7
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 6.2e-32 142.1 123 64.2
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 6.2e-32 142.1 106 66.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.1e-31 141.4 123 64.2
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.1e-31 141.4 207 47.8
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.4e-31 141.0 125 62.4
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.4e-31 141.0 108 70.4
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.4e-31 141.0 91 75.8
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 3.1e-31 139.8 122 62.3
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 4.0e-31 139.4 273 41.8
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 4.0e-31 139.4 91 74.7
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 5.3e-31 139.0 276 39.9
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 6.9e-31 138.7 105 70.5
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.0e-31 138.3 122 62.3
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.0e-31 138.3 122 62.3
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 9.0e-31 138.3 125 61.6
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.2e-30 137.9 257 40.5
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.5e-30 137.5 85 84.7
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.5e-30 137.5 181 49.2
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.6e-30 136.7 122 61.5
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.6e-30 136.7 122 61.5
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.6e-30 136.7 248 41.5
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.5e-30 136.0 152 51.3
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 5.8e-30 135.6 280 39.6
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 5.8e-30 135.6 249 41.8
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 7.6e-30 135.2 152 50.7
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 7.6e-30 135.2 176 50.0
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 9.9e-30 134.8 122 60.7
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-29 134.4 118 59.3
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.3e-29 134.4 119 62.2
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.7e-29 134.0 119 60.5
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.9e-29 133.3 206 45.6
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 4.9e-29 132.5 272 39.7
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 6.4e-29 132.1 123 59.3
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 8.4e-29 131.7 187 46.5
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 8.4e-29 131.7 182 48.9
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.1e-28 131.3 112 63.4
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.1e-28 131.3 126 58.7
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 1.4e-28 131.0 269 39.8
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.9e-28 130.6 85 76.5
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.9e-28 130.6 167 48.5
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 2.4e-28 130.2 185 44.9
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 2.4e-28 130.2 87 72.4
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 3.2e-28 129.8 129 58.9
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 3.2e-28 129.8 91 74.7
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 5.4e-28 129.0 179 47.5
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 5.4e-28 129.0 182 48.9
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 7.1e-28 128.6 271 39.9
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.2e-27 127.9 151 51.7
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 6.0e-27 125.6 160 48.8
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 6.0e-27 125.6 158 48.1
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 6.0e-27 125.6 160 48.8
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.3e-26 124.4 127 56.7
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.3e-26 124.4 160 48.1
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.8e-26 124.0 125 56.0
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 3.0e-26 123.2 158 51.3
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 3.9e-26 122.9 229 41.0
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 5.1e-26 122.5 208 43.3
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 5.1e-26 122.5 161 49.1
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 5.1e-26 122.5 89 67.4
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 8.7e-26 121.7 89 67.4
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 8.7e-26 121.7 89 67.4
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.1e-25 121.3 154 48.7
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.1e-25 121.3 262 36.6
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.1e-25 121.3 189 43.9
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 3.3e-25 119.8 86 66.3
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 7.4e-25 118.6 290 36.6
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 8.1e-24 115.2 219 37.4
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 3.1e-23 113.2 118 51.7
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.5e-22 110.9 209 41.1
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 2.6e-22 110.2 84 63.1
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 3.3e-17 93.2 100 47.0
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.3e-16 91.3 208 34.6
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 6.2e-16 89.0 53 75.5
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 3.1e-15 86.7 177 40.1
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 6.1e-11 72.4 53 62.3
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 1.8e-10 70.9 126 46.0
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 8.7e-10 68.6 78 43.6
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-07 61.2 69 53.6
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 2.6e-06 57.0 102 31.4


User provided reference genes

Program Settings