Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0080800 Rhododendron simsii HOM05D001676 ORTHO05D001539 7.1e-119 430.6 221 100.0
Rhsim04G0177100 Rhododendron simsii HOM05D001676 ORTHO05D001539 2.2e-96 355.9 202 93.1
vmacro08509 Vaccinium macrocarpon HOM05D001676 ORTHO05D001539 6.7e-85 317.8 202 84.2
CSS0046642 Camellia sinensis var. sinensis HOM05D001676 ORTHO05D001539 1.6e-62 243.4 207 65.2
Rhsim07G0183600 Rhododendron simsii HOM05D001982 ORTHO05D001539 3.7e-59 232.3 178 71.9
Actinidia20816 Actinidia chinensis HOM05D001676 ORTHO05D001539 1.6e-49 200.3 206 59.2
Dinv29846 Davidia involucrata HOM05D001676 ORTHO05D001539 2.7e-49 199.5 205 54.1
CSS0010928 Camellia sinensis var. sinensis HOM05D001676 ORTHO05D001539 2.2e-48 196.4 208 55.8
Actinidia35795 Actinidia chinensis HOM05D001676 ORTHO05D001539 1.9e-47 193.4 206 58.7
Dinv27064 Davidia involucrata HOM05D001676 ORTHO05D001539 2.1e-46 189.9 205 53.7
Haze_11401 Corylus avellana HOM05D001676 ORTHO05D001539 6.6e-40 168.3 218 48.6
COL.COLO4_15893 Corchorus olitorius HOM05D001676 ORTHO05D001539 2.5e-39 166.4 220 48.2
Thecc.04G257700 Theobroma cacao HOM05D001676 ORTHO05D001539 1.2e-38 164.1 213 47.4
GSVIVG01027840001 Vitis vinifera HOM05D001676 ORTHO05D001539 4.7e-38 162.2 214 47.7
Lj6C633G10 Lonicera japonica HOM05D001676 ORTHO05D001539 8.0e-38 161.4 212 47.2
QL06p018506 Quercus lobata HOM05D001676 ORTHO05D001539 1.4e-37 160.6 212 49.1
Ciclev10004168m.g Citrus clementina HOM05D001676 ORTHO05D001539 2.3e-37 159.8 202 48.5
TAR633G1347 Trochodendron aralioides HOM05D001676 ORTHO05D001539 5.7e-36 155.2 210 48.6
CiPaw.02G110700 Carya illinoinensis HOM05D001676 ORTHO05D001539 1.3e-35 154.1 209 46.9
Sabra10G0037100 Salix brachista HOM05D001676 ORTHO05D001539 6.4e-35 151.8 212 45.3
Manes.03G163000 Manihot esculenta HOM05D001676 ORTHO05D001539 8.3e-35 151.4 211 45.5
Potri.010G070200 Populus trichocarpa HOM05D001676 ORTHO05D001539 8.3e-35 151.4 212 45.8
Duzib212G0588 Durio zibethinus HOM05D001676 ORTHO05D001539 4.1e-34 149.1 212 43.9
RcHm_v2.0_Chr4g0393911 Rosa chinensis HOM05D001676 ORTHO05D001539 5.4e-34 148.7 209 46.9
Prupe.1G041100 Prunus persica HOM05D001676 ORTHO05D001539 7.0e-34 148.3 205 46.3
Duzib151G0984 Durio zibethinus HOM05D001676 ORTHO05D001539 9.2e-34 147.9 210 44.8
Duzib052G0282 Durio zibethinus HOM05D001676 ORTHO05D001539 1.6e-33 147.1 210 46.7
FvH4_4g03880 Fragaria vesca HOM05D001676 ORTHO05D001539 1.6e-33 147.1 209 46.9
Cpa.g.sc380.6 Carica papaya HOM05D001676 ORTHO05D001539 3.9e-32 142.5 216 44.0
TWI09G0719 Tripterygium wilfordii HOM05D001676 ORTHO05D001539 5.0e-32 142.1 212 45.3
VMungo0720G1476 Vigna mungo HOM05D001676 ORTHO05D001539 6.6e-32 141.7 210 47.1
Cfa014719 Carpinus fangiana HOM05D001676 ORTHO05D001539 1.1e-31 141.0 216 46.3
MD13G1215700 Malus domestica HOM05D001676 ORTHO05D001539 1.5e-31 140.6 203 45.8
Potri.008G168300 Populus trichocarpa HOM05D001676 ORTHO05D001539 1.9e-31 140.2 212 43.9
Oeu028209.2 Olea europaea HOM05D001676 ORTHO05D001539 4.3e-31 139.0 208 42.3
Phvul.010G067273 Phaseolus vulgaris HOM05D001676 ORTHO05D001539 7.3e-31 138.3 210 45.7
TAR362G0282 Trochodendron aralioides HOM05D001676 ORTHO05D001539 9.5e-31 137.9 214 44.4
FAN12G4001 Fragaria x ananassa HOM05D001676 ORTHO05D001539 1.2e-30 137.5 205 45.9
FAN17G1280 Fragaria x ananassa HOM05D001676 ORTHO05D001539 1.6e-30 137.1 205 45.9
MD16G1220700 Malus domestica HOM05D001676 ORTHO05D001539 4.7e-30 135.6 209 44.5
FAN22G0824 Fragaria x ananassa HOM05D001676 ORTHO05D001539 2.3e-29 133.3 205 44.9
Lalb_Chr02g0150231 Lupinus albus HOM05D001676 ORTHO05D001539 3.1e-29 132.9 207 42.5
Lj5g0006991 Lotus japonicus HOM05D001676 ORTHO05D001539 1.2e-28 131.0 207 42.5
arahy.Tifrunner.gnm1.ann1.7F0WTK Arachis hypogaea HOM05D001676 ORTHO05D001539 2.0e-28 130.2 209 42.1
Oeu005088.4 Olea europaea HOM05D001676 ORTHO05D001539 9.8e-28 127.9 203 37.9
Cc03_g05670 Coffea canephora HOM05D001676 ORTHO05D001539 1.3e-27 127.5 211 39.3
Glyma.20G207700 Glycine max HOM05D001676 ORTHO05D001539 3.7e-27 125.9 212 44.3
Gohir.D09G230200 Gossypium hirsutum HOM05D001676 ORTHO05D001539 3.7e-27 125.9 204 42.6
Glyma.10G182300 Glycine max HOM05D001676 ORTHO05D001539 4.9e-27 125.6 208 44.2
Gohir.D02G046100 Gossypium hirsutum HOM05D001676 ORTHO05D001539 1.1e-26 124.4 210 41.4
Gorai.006G252900 Gossypium raimondii HOM05D001676 ORTHO05D001539 1.1e-26 124.4 204 42.6
Lj6g0007164 Lotus japonicus HOM05D001676 ORTHO05D001539 1.4e-26 124.0 208 39.9
Glyma.10G004100 Glycine max HOM05D001676 ORTHO05D001539 3.2e-26 122.9 207 40.1
MBI10_g13802_MAGBIO Magnolia biondii HOM05D001676 ORTHO05D001539 1.6e-25 120.6 217 41.0
Ca_09855_v3 Cicer arietinum L. HOM05D001676 ORTHO05D001539 3.5e-25 119.4 206 41.7
Gohir.A02G040000 Gossypium hirsutum HOM05D001676 ORTHO05D001539 3.5e-25 119.4 209 38.8
Gorai.005G050900 Gossypium raimondii HOM05D001676 ORTHO05D001539 6.0e-25 118.6 205 40.5
Sabra08G0128300 Salix brachista HOM05D001676 ORTHO05D001539 7.8e-25 118.2 217 38.2
MBI07_g31098_MAGBIO Magnolia biondii HOM05D001676 ORTHO05D001539 2.3e-24 116.7 212 39.2
Glyma.02G004200 Glycine max HOM05D001676 ORTHO05D001539 3.0e-24 116.3 207 38.6
Psat6g117680 Pisum sativum HOM05D001676 ORTHO05D001539 3.0e-24 116.3 212 42.0
DCAR_002314 Daucus carota HOM05D001676 ORTHO05D001539 6.6e-24 115.2 212 39.2
EL10Ac3g04990 Beta vulgaris HOM05D001676 ORTHO05D001539 1.1e-23 114.4 208 38.5
AUR62002154 Chenopodium quinoa HOM05D001676 ORTHO05D001539 2.5e-23 113.2 202 38.6
Lalb_Chr06g0169151 Lupinus albus HOM05D001676 ORTHO05D001539 3.3e-23 112.8 224 38.4
MSTRG.24670 Avicennia marina HOM05D001676 ORTHO05D001539 5.6e-23 112.1 207 39.1
CANSAT78G2335 Cannabis sativa HOM05D001676 ORTHO05D001539 5.6e-23 112.1 207 41.1
Medtr1g075740 Medicago truncatula HOM05D001676 ORTHO05D001539 1.2e-22 110.9 213 40.4
Lj3C691T9 Lonicera japonica HOM05D001676 ORTHO05D001539 3.6e-22 109.4 214 36.9
Nn1g02892 Nelumbo nucifera HOM05D001676 ORTHO05D001539 4.7e-22 109.0 224 39.7
AUR62015553 Chenopodium quinoa HOM05D001676 ORTHO05D001539 6.2e-22 108.6 201 37.8
SalBow3G4141 Salvia bowleyana HOM05D001676 ORTHO05D001539 1.4e-21 107.5 215 39.1
MELO3C023009.2 Cucumis melo HOM05D001676 ORTHO05D001539 1.8e-21 107.1 193 38.9
Atru.chr4.2026 Acer truncatum HOM05D001676 ORTHO05D001539 5.2e-21 105.5 175 42.3
TPR.G18488 Trifolium pratense HOM05D001676 ORTHO05D001539 5.2e-21 105.5 130 49.2
Sed0015305 Sechium edule HOM05D001676 ORTHO05D001539 8.9e-21 104.8 209 39.2
Aqoxy5G00197 Aquilegia oxysepala HOM05D001676 ORTHO05D001539 1.5e-20 104.0 216 40.3
PSO210G1446 Papaver somniferum HOM05D001676 ORTHO05D001539 1.5e-20 104.0 214 36.0
PSO832G0756 Papaver somniferum HOM05D001676 ORTHO05D001539 1.5e-20 104.0 214 36.4
Sopen09g033170 Solanum pennellii HOM05D001676 ORTHO05D001539 2.0e-20 103.6 205 38.5
Peaxi162Scf00041g02416 Petunia axillaris HOM05D001676 ORTHO05D001539 4.4e-20 102.4 206 39.8
Hund11899 Selenicereus undatus HOM05D001676 ORTHO05D001539 9.8e-20 101.3 210 37.6
Ca_12150_v3 Cicer arietinum L. HOM05D001676 ORTHO05D001539 2.9e-19 99.8 193 41.5
ClCG06G007080 Citrullus lanatus HOM05D001676 ORTHO05D001539 2.9e-19 99.8 133 45.9
Solyc09g090270.3 Solanum lycopersicum HOM05D001676 ORTHO05D001539 3.7e-19 99.4 207 38.6
SGA_v2.0_scaffold43G16224 Striga asiatica HOM05D001676 ORTHO05D001539 8.3e-19 98.2 205 34.6
arahy.Tifrunner.gnm1.ann1.MJS5SD Arachis hypogaea HOM05D001676 ORTHO05D001539 1.1e-18 97.8 202 38.1
Eucgr.H00149 Eucalyptus grandis HOM05D001676 ORTHO05D001539 1.1e-18 97.8 206 35.4
Nitab4.5_0000044g0420 Nicotiana tabacum HOM05D001676 ORTHO05D001539 3.2e-18 96.3 206 37.4
Sc13g0005790 Simmondsia chinensis HOM05D001676 ORTHO05D001539 4.1e-18 95.9 225 32.9
PGSC0003DMG400017216 Solanum tuberosum HOM05D001676 ORTHO05D001539 5.4e-18 95.5 207 37.2
Nitab4.5_0000778g0070 Nicotiana tabacum HOM05D001676 ORTHO05D001539 1.6e-17 94.0 206 36.4
CAN.G220.6 Capsicum annuum HOM05D001676 ORTHO05D001539 2.1e-17 93.6 206 35.0
VMungo0720G2815 Vigna mungo HOM05D001676 ORTHO05D001539 1.0e-16 91.3 214 35.5
arahy.Tifrunner.gnm1.ann1.JB2S8U Arachis hypogaea HOM05D001676 ORTHO05D001539 1.7e-16 90.5 207 37.2
TPR.G25163 Trifolium pratense HOM05D001676 ORTHO05D001539 3.0e-16 89.7 190 36.3
Psat6g244160 Pisum sativum HOM05D001676 ORTHO05D001539 1.1e-15 87.8 173 39.3
Medtr1g041465 Medicago truncatula HOM05D001676 ORTHO05D001539 1.9e-15 87.0 199 37.2
PGR004G1623 Punica granatum HOM05D001676 ORTHO05D001539 3.3e-15 86.3 213 35.2
Sed0010483 Sechium edule HOM05D001676 ORTHO05D001539 4.3e-15 85.9 210 35.2
Phvul.007G277200 Phaseolus vulgaris HOM05D001676 ORTHO05D001539 8.1e-14 81.6 199 34.2
AT5G43310 Arabidopsis thaliana HOM05D001676 ORTHO05D001539 1.4e-13 80.9 186 38.7
Lj3A690G34 Lonicera japonica HOM05D001676 ORTHO05D001539 4.0e-13 79.3 208 31.7
AL8G17080 Arabidopsis lyrata HOM05D001676 ORTHO05D001539 6.8e-13 78.6 151 41.1
Sp2g08120 Schrenkiella parvula HOM05D001676 ORTHO05D001539 6.8e-13 78.6 185 37.8
ATR0736G045 Amborella trichopoda HOM05D001676 ORTHO05D001539 1.5e-12 77.4 172 36.6
Gohir.A09G229166 Gossypium hirsutum HOM05D001676 ORTHO05D001539 2.6e-12 76.6 194 35.6
MSTRG.21919 Avicennia marina HOM05D001676 ORTHO05D001539 7.6e-12 75.1 205 33.7
Carub.0008s0535 Capsella rubella HOM05D001676 ORTHO05D001539 9.9e-12 74.7 181 37.6
BcaC06g31710 Brassica carinata HOM05D001676 ORTHO05D001539 1.3e-11 74.3 149 38.9
PGSC0003DMG400005037 Solanum tuberosum HOM05D001676 ORTHO05D001539 4.9e-11 72.4 114 43.0
TPR.G10081 Trifolium pratense HOM05D001676 ORTHO05D001539 4.9e-11 72.4 128 41.4
A06p47920 Brassica napus HOM05D001676 ORTHO05D001539 8.4e-11 71.6 149 37.6
C07p25900 Brassica napus HOM05D001676 ORTHO05D001539 8.4e-11 71.6 149 37.6
BraA06t27662Z Brassica rapa HOM05D001676 ORTHO05D001539 8.4e-11 71.6 149 37.6
THA.LOC104801554 Tarenaya hassleriana HOM05D001676 ORTHO05D001539 1.9e-10 70.5 217 34.1
Migut.N00283 Erythranthe guttata HOM05D001676 ORTHO05D001539 5.4e-10 68.9 210 29.5
Aa31LG5G3810 Aethionema arabicum HOM05D001676 ORTHO05D001539 7.1e-10 68.6 202 32.7
CARHR180420 Cardamine hirsuta HOM05D001676 ORTHO05D001539 9.2e-10 68.2 206 32.5
ECA233G1832 Erigeron canadensis HOM05D001676 ORTHO05D001539 9.2e-10 68.2 137 33.6
Lsat_1_v5_gn_5_73160 Lactuca sativa HOM05D001676 ORTHO05D001539 4.6e-09 65.9 189 33.9
C02p54960 Brassica napus HOM05D001676 ORTHO05D001539 5.1e-08 62.4 151 36.4
BolC2t10432H Brassica oleracea HOM05D001676 ORTHO05D001539 6.6e-08 62.0 151 36.4
BcaC06g34663 Brassica carinata HOM05D001676 ORTHO05D001539 1.1e-07 61.2 152 38.8
BolC7t43111H Brassica oleracea HOM05D001676 ORTHO05D001539 1.1e-07 61.2 152 38.8
Zm00001eb065300 Zea mays HOM05D001676 ORTHO05D001539 1.5e-07 60.8 197 29.9
BcaC03g16572 Brassica carinata HOM05D000411 ORTHO05D001539 6.2e-06 55.5 151 34.4


User provided reference genes

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