Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0079100 Rhododendron simsii HOM05D000041 ORTHO05D339561 9.6e-56 219.9 112 100.0
Rhsim10G0053700 Rhododendron simsii HOM05D000041 ORTHO05D000061 1.0e-33 146.7 146 60.3
Rhsim10G0053000 Rhododendron simsii HOM05D000041 ORTHO05D338732 7.7e-21 104.0 60 88.3
Rhsim10G0053500 Rhododendron simsii HOM05D000041 ORTHO05D000452 5.9e-13 77.8 64 62.5
Rhsim10G0052500 Rhododendron simsii HOM05D000041 ORTHO05D000061 2.9e-12 75.5 47 83.0
Rhsim10G0053100 Rhododendron simsii HOM05D000041 ORTHO05D000061 6.5e-12 74.3 65 61.5
Rhsim10G0053400 Rhododendron simsii HOM05D000041 ORTHO05D000061 1.5e-11 73.2 61 63.9
CSS0003744 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D000195 1.8e-09 66.2 69 50.7
Rhsim10G0053200 Rhododendron simsii HOM05D000041 ORTHO05D000452 7.5e-08 60.8 29 96.6
vmacro05643 Vaccinium macrocarpon HOM05D000041 ORTHO05D000061 2.2e-07 59.3 53 54.7
Dinv41874 Davidia involucrata HOM05D000046 ORTHO05D000195 1.4e-06 56.6 67 47.8
Duzib248G0714 Durio zibethinus HOM05D000046 ORTHO05D000195 1.8e-06 56.2 58 50.0
Actinidia17997 Actinidia chinensis HOM05D000046 ORTHO05D000195 2.4e-06 55.8 73 43.8
Actinidia20572 Actinidia chinensis HOM05D000186 ORTHO05D001124 5.4e-06 54.7 73 42.5
Gohir.A12G013400 Gossypium hirsutum HOM05D000046 ORTHO05D000195 5.4e-06 54.7 56 48.2
TAR625G0517 Trochodendron aralioides HOM05D000046 ORTHO05D037467 5.4e-06 54.7 60 48.3
Actinidia26332 Actinidia chinensis HOM05D000046 ORTHO05D000195 7.0e-06 54.3 68 47.1
CiPaw.07G003500 Carya illinoinensis HOM05D000046 ORTHO05D000195 7.0e-06 54.3 61 45.9
Duzib132G0711 Durio zibethinus HOM05D000046 ORTHO05D000195 9.1e-06 53.9 58 50.0
Hund06159 Selenicereus undatus HOM05D000046 ORTHO05D011339 9.1e-06 53.9 44 59.1


User provided reference genes

Program Settings