Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.1e-58 229.6 105 100.0
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 8.4e-54 213.4 103 92.2
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 9.3e-53 209.9 103 91.3
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.3e-51 206.1 103 89.3
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.9e-51 204.5 103 88.3
Rhsim08G0127400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.2e-44 183.0 103 82.5
Rhsim09G0078700 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.1e-40 168.3 100 80.0
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.9e-36 153.7 83 80.7
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.0e-34 149.1 93 67.7
Rhsim01G0121300 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.7e-33 146.0 73 91.8
Rhsim01G0119600 Rhododendron simsii HOM05D011579 ORTHO05D011435 5.9e-31 137.5 93 63.4
Rhsim09G0063300 Rhododendron simsii HOM05D000030 ORTHO05D000031 1.5e-26 122.9 56 91.1
Rhsim06G0111000 Rhododendron simsii HOM05D000107 ORTHO05D011435 5.3e-24 114.4 73 61.6
Rhsim07G0148300 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.2e-23 113.2 51 94.1
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.0e-23 112.5 94 51.1
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.0e-23 112.5 94 51.1
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.7e-18 94.4 104 41.3
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 2.8e-17 92.0 89 44.9
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.8e-17 91.3 92 44.6
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.8e-16 89.4 96 43.8
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 1.8e-16 89.4 89 44.9
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 7.0e-16 87.4 89 43.8
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-15 85.9 86 45.3
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-15 84.7 93 38.7
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-15 84.7 93 38.7
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-14 83.6 93 38.7
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.3e-14 83.2 89 41.6
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-14 83.2 93 39.8
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.2e-14 82.4 92 41.3
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-14 82.4 88 40.9
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-14 81.3 67 53.7
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-14 81.3 67 53.7
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-14 81.3 67 53.7
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-14 81.3 67 53.7
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-14 81.3 67 53.7
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.0e-14 81.3 82 48.8
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-14 81.3 93 41.9
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-14 81.3 93 37.6
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 6.5e-14 80.9 93 41.9
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 6.5e-14 80.9 93 40.9
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.5e-14 80.5 92 39.1
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.5e-14 80.5 92 40.2
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 8.5e-14 80.5 92 40.2
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-13 80.1 103 41.7
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-13 79.7 93 39.8
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-13 79.0 97 40.2
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-13 79.0 93 41.9
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 2.5e-13 79.0 103 40.8
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.2e-13 78.2 67 52.2
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.2e-13 78.2 77 48.1
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-13 78.2 98 38.8
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-13 77.8 88 42.0
CSS0048540 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 7.2e-13 77.4 67 52.2
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-13 77.4 93 40.9
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-13 77.4 88 43.2
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-13 77.0 88 43.2
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 9.5e-13 77.0 94 41.5
Rhsim09G0063800 Rhododendron simsii HOM05D011579 ORTHO05D011435 9.5e-13 77.0 44 72.7
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-12 76.6 103 40.8
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-12 76.3 91 41.8
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-12 76.3 88 43.2
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.1e-12 75.9 92 39.1
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.7e-12 75.5 104 35.6
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-12 75.1 88 42.0
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-12 75.1 88 38.6
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-12 75.1 88 42.0
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 4.7e-12 74.7 92 39.1
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-12 74.7 88 42.0
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-12 74.7 88 40.9
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 8.0e-12 73.9 88 37.5
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 8.0e-12 73.9 87 39.1
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.8e-11 72.8 92 37.0
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-11 72.4 90 36.7
CSS0021615 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 3.0e-11 72.0 65 47.7
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-11 72.0 88 37.5
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-11 71.2 86 39.5
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-11 71.2 87 39.1
CSS0002224 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.5e-10 69.7 67 49.3
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 2.6e-10 68.9 103 35.0
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 2.6e-10 68.9 103 35.0
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-10 68.9 88 36.4
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 3.4e-10 68.6 103 34.0
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-10 68.2 91 37.4
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-10 67.8 93 36.6
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-10 67.4 90 35.6
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-10 67.4 88 35.2
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 9.8e-10 67.0 91 35.2
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 9.8e-10 67.0 83 41.0
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 1.3e-09 66.6 103 35.0
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 1.7e-09 66.2 87 34.5
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 2.2e-09 65.9 103 33.0
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 2.2e-09 65.9 104 36.5
Aqoxy6G02007 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 3.7e-09 65.1 95 31.6
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 3.7e-09 65.1 104 36.5
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 4.9e-09 64.7 89 39.3
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 4.9e-09 64.7 89 39.3
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-09 64.7 69 43.5
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-09 64.3 91 35.2
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 8.3e-09 63.9 96 34.4
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-08 63.5 89 38.2
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-08 63.5 91 37.4
Rhsim02G0150600 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.1e-08 63.5 45 55.6
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-08 62.8 94 36.2
Aqoxy3G01281 Aquilegia oxysepala HOM05D025411 ORTHO05D000140 3.1e-08 62.0 94 30.9
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 3.1e-08 62.0 89 36.0
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 4.1e-08 61.6 93 31.2
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.0e-08 60.8 90 32.2
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 1.6e-07 59.7 92 38.0
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-07 58.9 99 34.3
Rhsim03G0082400 Rhododendron simsii HOM05D000874 ORTHO05D001049 7.7e-07 57.4 35 60.0
Rhsim10G0076500 Rhododendron simsii HOM05D003738 ORTHO05D011435 1.0e-06 57.0 35 60.0
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-06 56.2 73 34.2
CSS0045174 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-06 55.8 53 43.4
Lj4P686T45 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-06 55.8 65 41.5
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 3.8e-06 55.1 92 35.9
Ah.01g016330 Amaranthus hybridus HOM05D018751 ORTHO05D012560 3.8e-06 55.1 92 35.9
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 3.8e-06 55.1 98 34.7
CSS0050454 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.8e-06 55.1 53 41.5


User provided reference genes

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