Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0075300 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.0e-70 267.7 140 100.0
RhsimUnG0085900 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.4e-40 167.9 134 66.4
Rhsim05G0007500 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-39 165.6 137 68.6
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-39 165.6 137 68.6
Rhsim04G0035700 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.6e-39 164.9 112 73.2
RhsimUnG0177800 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.6e-39 164.9 112 73.2
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.7e-38 160.6 137 66.4
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.6e-37 157.9 140 57.9
Rhsim11G0186100 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.6e-37 157.9 140 57.9
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.1e-36 156.0 100 81.0
RhsimUnG0053300 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.3e-35 151.4 132 62.9
Rhsim09G0015100 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.2e-32 142.1 111 65.8
Rhsim07G0051900 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.4e-26 122.1 80 75.0
Rhsim09G0077300 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.6e-23 111.7 94 64.9
Rhsim08G0017800 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.3e-21 105.1 120 55.0
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-20 103.6 137 49.6
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.3e-19 98.2 129 48.8
Rhsim12G0072300 Rhododendron simsii HOM05D000061 ORTHO05D000050 1.2e-18 97.1 59 81.4
Rhsim01G0048500 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.0e-18 96.3 128 48.4
Rhsim06G0241200 Rhododendron simsii HOM05D010265 ORTHO05D009356 4.5e-18 95.1 128 46.9
Rhsim01G0138200 Rhododendron simsii HOM05D010265 ORTHO05D009356 7.6e-18 94.4 128 46.9
Rhsim13G0191800 Rhododendron simsii HOM05D010265 ORTHO05D009356 7.6e-18 94.4 128 46.9
Rhsim09G0039900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-17 94.0 158 43.0
Rhsim02G0131300 Rhododendron simsii HOM05D029833 ORTHO05D009356 6.5e-17 91.3 135 43.7
Rhsim05G0212200 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.5e-17 91.3 114 50.0
Rhsim11G0006600 Rhododendron simsii HOM05D008219 ORTHO05D018100 2.5e-16 89.4 131 42.0
Rhsim08G0205100 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.1e-16 87.8 114 46.5
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.1e-16 87.8 114 46.5
Rhsim01G0085700 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.5e-15 85.5 128 44.5
Rhsim05G0208300 Rhododendron simsii HOM05D010265 ORTHO05D009356 7.9e-15 84.3 107 47.7
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-14 83.6 114 45.6
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.8e-14 83.2 146 39.0
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.7e-14 81.3 151 39.1
Rhsim09G0050400 Rhododendron simsii HOM05D017214 ORTHO05D018100 4.3e-13 78.6 129 42.6
RhsimUnG0000500 Rhododendron simsii HOM05D010265 ORTHO05D009356 4.3e-13 78.6 135 40.0
Rhsim05G0211700 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.7e-12 75.5 63 61.9
Rhsim11G0108900 Rhododendron simsii HOM05D017214 ORTHO05D018100 3.7e-12 75.5 126 42.9
Rhsim13G0074200 Rhododendron simsii HOM05D010265 ORTHO05D009356 8.2e-12 74.3 121 41.3
RhsimUnG0038800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.8e-11 73.2 68 58.8
RhsimUnG0151500 Rhododendron simsii HOM05D017214 ORTHO05D018100 1.8e-11 73.2 149 39.6
Rhsim02G0102300 Rhododendron simsii HOM05D000030 ORTHO05D000031 9.0e-11 70.9 121 39.7
Rhsim03G0183200 Rhododendron simsii HOM05D000071 ORTHO05D000029 9.0e-11 70.9 68 55.9
Rhsim08G0243500 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.9e-10 68.2 104 42.3
RhsimUnG0121600 Rhododendron simsii HOM05D029833 ORTHO05D339942 5.9e-10 68.2 110 42.7
Rhsim07G0053500 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.5e-09 64.7 57 64.9
vmacro02192 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.4e-08 63.5 114 39.5
vmacro11329 Vaccinium macrocarpon HOM05D010265 ORTHO05D051532 1.9e-08 63.2 109 39.4
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 4.2e-08 62.0 114 39.5
Rhsim04G0148100 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.3e-08 60.8 59 54.2
Rhsim02G0131600 Rhododendron simsii HOM05D029833 ORTHO05D340012 1.6e-07 60.1 61 52.5
RhsimUnG0176300 Rhododendron simsii HOM05D000026 ORTHO05D000127 2.7e-07 59.3 121 38.0
Rhsim01G0117600 Rhododendron simsii HOM05D008219 ORTHO05D339546 4.6e-07 58.5 63 49.2
Rhsim06G0131900 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.0e-06 55.8 53 60.4


User provided reference genes

Program Settings