Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 2.8e-269 931.4 479 100.0
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 3.4e-267 924.5 480 99.6
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 3.9e-239 831.2 519 85.4
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 7.6e-227 790.4 481 85.4
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.3e-223 779.6 483 84.7
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 2.3e-215 752.3 481 81.1
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 2.8e-213 745.3 480 80.0
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 3.7e-213 745.0 483 80.1
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 6.3e-213 744.2 482 78.4
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 5.3e-212 741.1 486 80.0
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 9.1e-212 740.3 480 79.0
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 1.5e-211 739.6 482 80.1
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 2.0e-211 739.2 481 78.0
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.0e-210 736.9 481 78.0
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 2.9e-210 735.3 483 78.5
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 3.8e-210 734.9 483 78.7
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 2.3e-207 725.7 483 78.5
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 6.7e-207 724.2 478 78.9
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 1.1e-206 723.4 483 77.2
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 4.4e-206 721.5 481 78.6
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 5.7e-206 721.1 474 77.6
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 9.7e-206 720.3 481 76.9
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 9.7e-206 720.3 479 79.3
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 2.8e-205 718.8 483 77.0
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 4.8e-205 718.0 478 78.9
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 4.8e-205 718.0 479 78.3
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.1e-204 716.8 481 78.0
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 2.4e-204 715.7 478 78.5
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.2e-203 713.4 481 76.7
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 1.5e-203 713.0 483 75.6
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.5e-203 713.0 481 76.7
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 5.9e-203 711.1 483 76.2
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 7.7e-203 710.7 481 76.3
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 1.7e-202 709.5 487 75.4
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 3.8e-202 708.4 487 75.8
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 5.0e-202 708.0 487 75.2
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 8.5e-202 707.2 483 76.6
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 4.2e-201 704.9 482 76.8
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 5.5e-201 704.5 480 76.5
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 7.2e-201 704.1 479 76.6
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 1.2e-200 703.4 487 74.9
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 2.1e-200 702.6 482 75.7
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 2.7e-200 702.2 474 77.0
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 3.6e-200 701.8 497 73.8
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 1.4e-199 699.9 478 77.8
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 6.7e-199 697.6 480 76.0
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 1.1e-198 696.8 482 75.5
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 2.0e-198 696.0 480 76.2
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 3.7e-197 691.8 481 76.9
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 6.3e-197 691.0 478 75.7
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 1.4e-196 689.9 480 76.0
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 2.4e-196 689.1 479 75.4
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 7.0e-196 687.6 478 76.4
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 2.0e-195 686.0 480 73.5
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.5e-195 684.9 483 74.1
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 7.7e-195 684.1 474 74.9
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 1.3e-194 683.3 511 71.2
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 3.8e-194 681.8 481 72.8
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 2.5e-193 679.1 482 74.7
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 9.4e-193 677.2 482 72.8
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 6.1e-192 674.5 480 72.5
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 8.8e-191 670.6 480 72.5
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 1.5e-190 669.8 479 72.4
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 7.5e-190 667.5 535 68.0
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 3.7e-189 665.2 481 73.8
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 6.3e-189 664.5 445 79.8
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 5.4e-188 661.4 482 73.9
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 7.0e-188 661.0 479 73.7
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 2.7e-187 659.1 423 79.0
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.7e-186 656.4 482 72.0
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 2.9e-186 655.6 480 70.0
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 7.2e-185 651.0 482 71.8
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 7.2e-185 651.0 380 88.7
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 7.2e-185 651.0 479 72.9
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 4.7e-184 648.3 481 71.9
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 4.0e-183 645.2 488 70.9
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 1.3e-181 640.2 413 80.1
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 7.0e-180 634.4 479 70.6
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 1.2e-179 633.6 479 70.1
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 1.2e-179 633.6 482 70.5
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 1.2e-179 633.6 482 70.5
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 1.2e-179 633.6 482 70.5
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 7.7e-179 630.9 478 70.5
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 8.6e-178 627.5 479 69.7
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 7.2e-177 624.4 481 71.7
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 8.0e-176 620.9 481 69.9
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 1.4e-175 620.2 471 69.9
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 8.9e-175 617.5 475 72.0
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 1.7e-173 613.2 478 68.8
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 5.6e-169 598.2 481 66.7
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.2e-168 597.0 479 66.6
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 2.1e-168 596.3 482 66.6
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 2.8e-168 595.9 426 72.5
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 6.4e-165 584.7 376 80.9
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 6.4e-165 584.7 433 73.2
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 1.1e-164 583.9 471 66.5
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 1.2e-163 580.5 497 63.8
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 4.6e-163 578.6 480 67.1
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 5.8e-158 561.6 576 57.3
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 1.3e-157 560.5 382 74.6
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 3.2e-156 555.8 337 84.9
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 1.9e-153 546.6 386 72.5
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 2.7e-147 526.2 484 58.9
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 1.1e-145 520.8 483 59.8
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 9.6e-137 491.1 314 80.6
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 6.4e-133 478.4 812 40.5
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 2.1e-128 463.4 347 68.3
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 2.9e-125 453.0 317 75.1
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 8.1e-120 434.9 379 59.4
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 1.8e-119 433.7 483 52.4
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 3.9e-114 416.0 454 53.3
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 1.9e-113 413.7 454 52.6
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 2.1e-112 410.2 459 51.4
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 8.4e-109 398.3 454 52.0
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.5e-105 387.5 453 51.0
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 1.9e-105 387.1 455 50.3
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 7.4e-105 385.2 473 49.3
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 1.1e-103 381.3 455 49.7
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 3.2e-100 369.8 455 49.0
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 1.8e-98 364.0 445 47.6
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 1.1e-97 361.3 410 49.8
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 3.3e-97 359.8 372 53.5
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 5.7e-97 359.0 371 53.1
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 4.8e-96 355.9 227 79.3
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 9.1e-95 351.7 238 75.2
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 1.5e-94 350.9 407 50.1
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 2.0e-94 350.5 247 74.5
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 5.1e-90 335.9 254 71.7
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.8e-87 327.4 452 46.2
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 4.7e-83 312.8 490 41.6
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 7.7e-70 268.9 488 38.1
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 2.3e-58 230.7 175 70.9
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 1.6e-54 218.0 310 43.5
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 2.1e-51 207.6 206 54.9
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 1.9e-44 184.5 203 49.3
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 1.4e-39 168.3 446 31.4
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 6.0e-38 162.9 106 78.3
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 3.6e-35 153.7 102 78.4
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 2.0e-33 147.9 516 28.7
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 1.8e-18 98.2 91 53.8
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 1.2e-14 85.5 63 73.0
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 8.7e-13 79.3 143 32.2
SEGI_07227 Sequoiadendron giganteum HOM05D001663 ORTHO05D015595 7.6e-09 66.2 81 44.4
HanXRQChr01g0001151 Helianthus annuus HOM05D001663 ORTHO05D005717 9.3e-07 59.3 141 36.9
Cre08.g377600 Chlamydomonas reinhardtii HOM05D001663 ORTHO05D005717 1.6e-06 58.5 83 34.9


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