Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0071300 Rhododendron simsii HOM05D002068 ORTHO05D002029 2.2e-38 161.8 79 100.0
Rhsim06G0078500 Rhododendron simsii HOM05D002068 ORTHO05D002029 2.4e-16 88.6 89 59.6
Rhsim06G0150900 Rhododendron simsii HOM05D002068 ORTHO05D002029 2.0e-15 85.5 68 66.2
Rhsim06G0151000 Rhododendron simsii HOM05D001802 ORTHO05D021376 2.4e-13 78.6 51 74.5
TAR625G1508 Trochodendron aralioides HOM05D002068 ORTHO05D002029 1.2e-12 76.3 70 60.0
TAR381G1067 Trochodendron aralioides HOM05D002068 ORTHO05D002029 2.1e-12 75.5 74 58.1
Hma1.2p1_0593F.1_g185620 Hydrangea macrophylla HOM05D002068 ORTHO05D002029 6.0e-12 73.9 70 61.4
Actinidia10341 Actinidia chinensis HOM05D002068 ORTHO05D002029 3.3e-10 68.2 54 68.5
Dinv07067 Davidia involucrata HOM05D002068 ORTHO05D002029 2.1e-09 65.5 68 58.8
Haze_22301 Corylus avellana HOM05D002068 ORTHO05D002029 3.7e-09 64.7 77 54.5
Nn1g05438 Nelumbo nucifera HOM05D002068 ORTHO05D002029 1.1e-08 63.2 74 48.6
CAN.G970.21 Capsicum annuum HOM05D002068 ORTHO05D002029 1.8e-08 62.4 77 53.2
CsaV3_3G047610 Cucumis sativus L. HOM05D002068 ORTHO05D002029 1.8e-08 62.4 89 46.1
ClCG11G014240 Citrullus lanatus HOM05D002068 ORTHO05D002029 2.4e-08 62.0 89 46.1
QL12p037481 Quercus lobata HOM05D002068 ORTHO05D002029 3.1e-08 61.6 59 57.6
TWI12G1282 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 5.3e-08 60.8 81 46.9
MELO3C003561.2 Cucumis melo HOM05D002068 ORTHO05D002029 6.9e-08 60.5 66 53.0
Duzib093G1613 Durio zibethinus HOM05D002068 ORTHO05D002029 6.9e-08 60.5 63 54.0
MBI05_g05603_MAGBIO Magnolia biondii HOM05D002068 ORTHO05D002029 6.9e-08 60.5 74 52.7
Cpa.g.sc36.170 Carica papaya HOM05D002068 ORTHO05D002029 9.0e-08 60.1 70 52.9
CiPaw.07G177400 Carya illinoinensis HOM05D002068 ORTHO05D002029 1.2e-07 59.7 81 46.9
Ca_16041_v3 Cicer arietinum L. HOM05D002068 ORTHO05D002029 1.2e-07 59.7 70 54.3
Lsat_1_v5_gn_6_104380 Lactuca sativa HOM05D002068 ORTHO05D002029 1.5e-07 59.3 71 47.9
Solyc04g074520.1 Solanum lycopersicum HOM05D002068 ORTHO05D002029 2.0e-07 58.9 71 52.1
Sopen04g029540 Solanum pennellii HOM05D002068 ORTHO05D002029 2.0e-07 58.9 71 52.1
PGSC0003DMG400047327 Solanum tuberosum HOM05D002068 ORTHO05D002029 2.0e-07 58.9 71 52.1
Thecc.08G103100 Theobroma cacao HOM05D002068 ORTHO05D002029 3.4e-07 58.2 63 52.4
COL.COLO4_12019 Corchorus olitorius HOM05D002068 ORTHO05D002029 4.5e-07 57.8 63 52.4
Eucgr.B00035 Eucalyptus grandis HOM05D002068 ORTHO05D002029 4.5e-07 57.8 62 54.8
Potri.002G099900 Populus trichocarpa HOM05D002068 ORTHO05D002029 5.8e-07 57.4 76 47.4
TPR.G14203 Trifolium pratense HOM05D002068 ORTHO05D002029 5.8e-07 57.4 70 48.6
Ciclev10001938m.g Citrus clementina HOM05D002068 ORTHO05D002029 7.6e-07 57.0 75 48.0
Lj4C97T4 Lonicera japonica HOM05D002068 ORTHO05D002029 9.9e-07 56.6 86 48.8
Glyma.04G099600 Glycine max HOM05D002068 ORTHO05D002029 1.3e-06 56.2 65 50.8
Glyma.06G101400 Glycine max HOM05D002068 ORTHO05D002029 1.3e-06 56.2 65 50.8
Psat0s4053g0080 Pisum sativum HOM05D002068 ORTHO05D002029 1.7e-06 55.8 69 44.9
Atru.chr13.1127 Acer truncatum HOM05D002068 ORTHO05D002029 2.2e-06 55.5 56 57.1
CSS0044165 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 2.9e-06 55.1 69 49.3
Duzib041G0330 Durio zibethinus HOM05D002068 ORTHO05D002029 4.9e-06 54.3 63 50.8
Cc10_g06770 Coffea canephora HOM05D002068 ORTHO05D002029 6.4e-06 53.9 62 51.6


User provided reference genes

Program Settings