Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0066800 Rhododendron simsii HOM05D007867 ORTHO05D009953 3.7e-38 161.0 78 100.0
Actinidia36378 Actinidia chinensis HOM05D007867 ORTHO05D009953 1.1e-18 96.3 78 60.3
vmacro19595 Vaccinium macrocarpon HOM05D007867 ORTHO05D009953 3.4e-15 84.7 81 55.6
Dinv36978 Davidia involucrata HOM05D007867 ORTHO05D009953 2.2e-14 82.0 80 52.5
Sed0014306 Sechium edule HOM05D007867 ORTHO05D009953 1.1e-13 79.7 79 55.7
CiPaw.08G128500 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.4e-13 79.3 78 53.8
TPR.G37059 Trifolium pratense HOM05D007867 ORTHO05D009953 1.8e-13 79.0 80 55.0
Nn1g05680 Nelumbo nucifera HOM05D007867 ORTHO05D009953 4.1e-13 77.8 77 54.5
ATR0800G156 Amborella trichopoda HOM05D007867 ORTHO05D009953 5.4e-13 77.4 76 52.6
Sc03g0000590 Simmondsia chinensis HOM05D007867 ORTHO05D009953 9.2e-13 76.6 77 59.7
Thecc.01G083600 Theobroma cacao HOM05D007867 ORTHO05D009953 1.2e-12 76.3 77 54.5
Zm00001eb061250 Zea mays HOM05D007867 ORTHO05D009953 4.6e-12 74.3 77 51.9
FvH4_1g18950 Fragaria vesca HOM05D007867 ORTHO05D009953 5.9e-12 73.9 82 51.2
RcHm_v2.0_Chr2g0109971 Rosa chinensis HOM05D007867 ORTHO05D009953 7.8e-12 73.6 80 52.5
Lalb_Chr09g0325761 Lupinus albus HOM05D007867 ORTHO05D009953 1.0e-11 73.2 79 51.9
Gohir.A05G401300 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.3e-11 72.8 87 47.1
CiPaw.08G145800 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.7e-11 72.4 75 53.3
CiPaw.05G026800 Carya illinoinensis HOM05D007867 ORTHO05D009953 2.3e-11 72.0 77 51.9
CiPaw.08G145600 Carya illinoinensis HOM05D007867 ORTHO05D009953 2.3e-11 72.0 79 50.6
Potri.015G025600 Populus trichocarpa HOM05D007867 ORTHO05D009953 3.9e-11 71.2 78 51.3
Gohir.A11G209001 Gossypium hirsutum HOM05D007867 ORTHO05D009953 5.0e-11 70.9 77 50.6
Gohir.D11G214500 Gossypium hirsutum HOM05D007867 ORTHO05D009953 8.6e-11 70.1 77 51.9
MD10G1057100 Malus domestica HOM05D007867 ORTHO05D009953 1.5e-10 69.3 79 50.6
CSS0005733 Camellia sinensis var. sinensis HOM05D007867 ORTHO05D009953 1.9e-10 68.9 55 61.8
Lj2g0008804 Lotus japonicus HOM05D007867 ORTHO05D009953 2.5e-10 68.6 87 46.0
Ca_13472_v3 Cicer arietinum L. HOM05D007867 ORTHO05D009953 1.2e-09 66.2 77 49.4
DCAR_021457 Daucus carota HOM05D000419 ORTHO05D000692 1.6e-09 65.9 57 61.4
GSVIVG01006775001 Vitis vinifera HOM05D007867 ORTHO05D009953 2.8e-09 65.1 77 48.1
CiPaw.07G042200 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.0e-08 63.2 74 47.3
Manes.13G104200 Manihot esculenta HOM05D007867 ORTHO05D009953 1.0e-08 63.2 77 46.8
Medtr5g030870 Medicago truncatula HOM05D007867 ORTHO05D009953 1.0e-08 63.2 78 44.9
Nn5g29770 Nelumbo nucifera HOM05D007867 ORTHO05D009953 1.0e-08 63.2 77 46.8
Oeu033792.2 Olea europaea HOM05D007867 ORTHO05D009953 1.0e-08 63.2 51 60.8
Gohir.D03G034400 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.4e-08 62.8 77 45.5
Gorai.003G036100 Gossypium raimondii HOM05D007867 ORTHO05D009953 1.4e-08 62.8 77 45.5
Os07g0191650 Oryza sativa ssp. japonica HOM05D007867 ORTHO05D009953 1.4e-08 62.8 87 46.0
FAN28G0366 Fragaria x ananassa HOM05D007867 ORTHO05D009953 1.8e-08 62.4 57 56.1
Rhsim05G0096100 Rhododendron simsii HOM05D007867 ORTHO05D009953 2.3e-08 62.0 78 53.8
EL10Ac9g22129 Beta vulgaris HOM05D007867 ORTHO05D009953 3.1e-08 61.6 84 40.5
Eucgr.I02581 Eucalyptus grandis HOM05D007867 ORTHO05D009953 3.1e-08 61.6 80 48.8
Cc02_g20570 Coffea canephora HOM05D007867 ORTHO05D009953 4.0e-08 61.2 77 46.8
Lalb_Chr16g0383101 Lupinus albus HOM05D007867 ORTHO05D009953 5.2e-08 60.8 61 55.7
Glyma.09G202700 Glycine max HOM05D007867 ORTHO05D009953 6.8e-08 60.5 81 42.0
Psat2g134400 Pisum sativum HOM05D007867 ORTHO05D009953 1.2e-07 59.7 49 55.1
Hund00401 Selenicereus undatus HOM05D007867 ORTHO05D009953 1.2e-07 59.7 81 44.4
Hma1.2p1_1119F.1_g259180 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 1.5e-07 59.3 60 53.3
TPR.G40500 Trifolium pratense HOM05D007867 ORTHO05D009953 4.4e-07 57.8 42 66.7
SHI12190 Sapria himalayana HOM05D007867 ORTHO05D009953 7.5e-07 57.0 57 50.9
Solyc01g106300.3 Solanum lycopersicum HOM05D007867 ORTHO05D009953 7.5e-07 57.0 68 45.6
CiPaw.06G161100 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.7e-06 55.8 50 56.0
Oeu014206.1 Olea europaea HOM05D007867 ORTHO05D009953 3.7e-06 54.7 75 49.3
FAN23G2231 Fragaria x ananassa HOM05D007867 ORTHO05D009953 4.9e-06 54.3 80 41.2


User provided reference genes

Program Settings