Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 9.5e-159 563.5 301 100.0
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.0e-104 384.0 291 75.6
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 8.0e-89 331.3 309 67.0
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.8e-75 285.8 203 79.8
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 2.2e-54 216.9 313 48.6
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 8.9e-48 194.9 316 44.0
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 3.9e-43 179.5 306 44.4
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 1.5e-39 167.5 303 43.6
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 2.5e-34 150.2 232 48.3
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 4.4e-31 139.4 293 38.2
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 4.9e-30 136.0 322 36.6
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 3.0e-27 126.7 292 35.6
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.5e-26 124.4 298 37.9
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 1.2e-23 114.8 327 33.9
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 5.8e-23 112.5 338 34.0
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 2.2e-22 110.5 286 38.1
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 2.2e-22 110.5 295 35.9
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 6.4e-22 109.0 279 35.5
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 8.4e-22 108.6 306 35.3
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 1.4e-21 107.8 321 36.4
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 5.4e-21 105.9 304 37.5
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 7.1e-21 105.5 321 33.6
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 1.2e-20 104.8 299 34.1
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 1.6e-20 104.4 288 34.7
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 1.6e-20 104.4 286 35.3
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 4.6e-20 102.8 297 33.3
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 7.9e-20 102.1 306 33.7
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.3e-17 94.7 304 34.5
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 1.3e-17 94.7 286 33.9
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 2.1e-17 94.0 294 31.6
Actinidia29751 Actinidia chinensis HOM05D068263 ORTHO05D008337 2.8e-17 93.6 288 35.4
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.4e-16 91.3 234 35.9
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 4.0e-16 89.7 293 33.1
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 1.5e-15 87.8 296 34.5
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 4.5e-15 86.3 154 38.3
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 4.5e-15 86.3 304 31.2
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 7.6e-15 85.5 159 41.5
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 7.6e-15 85.5 297 31.0
Cc10_g01650 Coffea canephora HOM05D007760 ORTHO05D008337 1.7e-14 84.3 327 31.2
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 1.7e-14 84.3 160 41.9
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 6.4e-14 82.4 302 31.8
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 8.4e-14 82.0 285 33.7
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 8.4e-14 82.0 360 27.2
Lj4P797T23 Lonicera japonica HOM05D007760 ORTHO05D008337 1.1e-13 81.6 194 36.6
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.1e-13 81.6 172 37.2
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.4e-13 81.3 341 30.8
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 4.2e-13 79.7 242 33.9
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 5.5e-13 79.3 222 36.9
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 5.5e-13 79.3 299 30.8
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.2e-12 78.2 231 32.5
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.6e-12 77.8 289 32.5
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 1.6e-12 77.8 168 39.9
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 1.6e-12 77.8 131 45.0
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.7e-12 77.0 156 35.9
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 3.5e-12 76.6 257 32.3
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 4.6e-12 76.3 228 31.6
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 4.6e-12 76.3 178 34.3
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 7.9e-12 75.5 231 32.0
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.0e-11 75.1 192 36.5
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 1.0e-11 75.1 319 28.8
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.3e-11 74.7 153 35.3
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.8e-11 74.3 154 36.4
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 3.0e-11 73.6 306 31.0
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 3.0e-11 73.6 275 32.4
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.0e-11 73.6 153 35.3
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.0e-11 73.6 149 38.9
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 3.0e-11 73.6 192 35.9
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 3.0e-11 73.6 199 34.2
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 3.9e-11 73.2 199 36.2
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 3.9e-11 73.2 231 31.2
Actinidia37934 Actinidia chinensis HOM05D068263 ORTHO05D008337 6.7e-11 72.4 256 32.8
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 6.7e-11 72.4 308 31.5
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 6.7e-11 72.4 261 32.2
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 8.7e-11 72.0 130 42.3
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 1.1e-10 71.6 304 32.9
HanXRQChr13g0386671 Helianthus annuus HOM05D022491 ORTHO05D000476 3.3e-10 70.1 299 28.4
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.8e-09 67.0 154 35.1
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 2.8e-09 67.0 227 33.9
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 2.8e-09 67.0 186 33.9
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 3.7e-09 66.6 204 31.4
CAN.G311.33 Capsicum annuum HOM05D021694 ORTHO05D008337 4.8e-09 66.2 166 35.5
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 4.8e-09 66.2 275 31.6
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 6.2e-09 65.9 292 31.5
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 6.2e-09 65.9 140 40.0
GSVIVG01009911001 Vitis vinifera HOM05D007760 ORTHO05D008337 6.2e-09 65.9 145 40.0
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 8.2e-09 65.5 228 32.5
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 8.2e-09 65.5 288 30.6
Duzib093G0245 Durio zibethinus HOM05D007760 ORTHO05D008337 1.4e-08 64.7 188 29.8
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 1.8e-08 64.3 171 32.2
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 2.4e-08 63.9 238 30.3
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 6.9e-08 62.4 161 32.9
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 2.0e-07 60.8 200 32.0
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 2.6e-07 60.5 172 37.8
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 3.4e-07 60.1 172 37.8
Sed0012610 Sechium edule HOM05D016278 ORTHO05D008337 3.4e-07 60.1 154 35.7
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 1.7e-06 57.8 237 32.5
EL10Ac1g02191 Beta vulgaris HOM05D030748 ORTHO05D008337 4.9e-06 56.2 150 38.0


User provided reference genes

Program Settings