Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.0e-268 927.5 477 100.0
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-237 826.2 477 90.8
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.3e-223 778.9 613 71.3
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.6e-146 521.5 624 52.4
Rhsim05G0007500 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.5e-139 499.2 281 95.0
Rhsim11G0186100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-107 394.0 338 68.3
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.7e-73 279.3 184 75.0
RhsimUnG0085900 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.4e-65 253.1 428 43.5
Rhsim09G0015100 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.7e-51 206.5 310 46.5
Rhsim09G0077300 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.3e-44 183.3 307 43.6
RhsimUnG0177800 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.2e-42 176.4 160 62.5
Rhsim04G0035700 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-40 171.4 160 61.2
RhsimUnG0075300 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-38 164.1 137 68.6
Rhsim07G0051900 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.3e-36 156.8 206 51.0
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.6e-33 147.5 276 40.6
RhsimUnG0053300 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.1e-31 140.2 139 58.3
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.7e-27 126.7 80 70.0
Rhsim08G0017800 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.5e-22 110.5 172 45.9
Rhsim09G0039900 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.0e-22 109.8 306 35.3
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-21 108.6 679 24.6
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 3.0e-21 107.5 452 28.8
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 3.6e-19 100.5 134 37.3
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 8.1e-19 99.4 81 49.4
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 3.1e-18 97.4 83 53.0
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.1e-18 97.4 309 31.4
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.0e-18 97.1 667 23.8
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 5.8e-17 93.2 83 51.8
Rhsim01G0048500 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.8e-17 93.2 191 37.2
Rhsim13G0191800 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.2e-16 91.3 215 34.0
Rhsim12G0072300 Rhododendron simsii HOM05D000061 ORTHO05D000050 1.4e-15 88.6 59 72.9
Rhsim02G0102300 Rhododendron simsii HOM05D000030 ORTHO05D000031 7.1e-15 86.3 290 31.4
Rhsim01G0138200 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.7e-14 84.3 254 29.5
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 3.5e-14 84.0 454 25.1
Rhsim02G0044900 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.6e-14 83.6 141 47.5
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.3e-13 82.0 309 30.4
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.0e-13 80.9 325 30.5
Rhsim01G0085700 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.9e-13 80.5 138 39.1
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.1e-13 80.1 62 56.5
Rhsim08G0205100 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.6e-13 79.7 114 43.0
Rhsim06G0241200 Rhododendron simsii HOM05D010265 ORTHO05D009356 8.7e-13 79.3 264 29.9
Rhsim05G0212200 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.9e-12 78.2 130 43.1
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.6e-12 75.9 139 33.8
Rhsim01G0095600 Rhododendron simsii HOM05D000121 ORTHO05D000102 1.6e-11 75.1 234 32.1
Rhsim04G0148100 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.6e-11 73.9 81 49.4
Rhsim05G0208300 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.6e-11 73.9 106 42.5
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 8.1e-11 72.8 80 41.2
Rhsim09G0039600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.8e-10 71.6 157 40.1
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.4e-10 71.2 101 37.6
Rhsim02G0131300 Rhododendron simsii HOM05D029833 ORTHO05D009356 3.1e-10 70.9 140 33.6
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.0e-10 70.5 114 34.2
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.0e-10 70.5 78 39.7
RhsimUnG0000500 Rhododendron simsii HOM05D010265 ORTHO05D009356 4.0e-10 70.5 193 31.1
Rhsim07G0053500 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.2e-10 70.1 144 38.9
Rhsim09G0050400 Rhododendron simsii HOM05D017214 ORTHO05D018100 5.2e-10 70.1 180 35.0
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.9e-10 69.7 78 38.5
Rhsim06G0131900 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.9e-10 69.7 150 40.0
Rhsim05G0211700 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.0e-09 68.2 63 54.0
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.6e-09 67.8 99 31.3
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.6e-09 67.8 101 34.7
RhsimUnG0038800 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.4e-09 67.4 83 47.0
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.4e-09 67.4 95 34.7
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 7.6e-09 66.2 110 32.7
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.9e-09 65.9 111 31.5
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-08 65.5 97 30.9
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 1.7e-08 65.1 84 36.9
Rhsim03G0183200 Rhododendron simsii HOM05D000071 ORTHO05D000029 2.2e-08 64.7 68 48.5
Lsat_1_v5_gn_6_74401 Lactuca sativa HOM05D003915 ORTHO05D005386 2.9e-08 64.3 106 35.8
Ah.06g183510 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.8e-08 63.9 82 36.6
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.9e-08 63.5 83 37.3
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.4e-08 63.2 84 35.7
FAN20G2064 Fragaria x ananassa HOM05D004650 ORTHO05D005715 8.4e-08 62.8 137 27.7
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 8.4e-08 62.8 96 31.2
Phvul.001G152700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-07 62.4 154 26.0
Rhsim13G0074200 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.1e-07 62.4 131 35.1
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.4e-07 62.0 127 29.9
vmacro11329 Vaccinium macrocarpon HOM05D010265 ORTHO05D051532 1.4e-07 62.0 179 30.2
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.9e-07 61.6 82 32.9
Ah.11g045590 Amaranthus hybridus HOM05D000851 ORTHO05D003960 1.9e-07 61.6 119 31.1
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.9e-07 61.6 135 28.1
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.2e-07 60.8 81 37.0
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.2e-07 60.5 86 36.0
COL.COLO4_36277 Corchorus olitorius HOM05D008263 ORTHO05D009583 4.2e-07 60.5 81 32.1
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.4e-07 60.1 80 35.0
Lj5g0009491 Lotus japonicus HOM05D002777 ORTHO05D001516 5.4e-07 60.1 81 32.1
Ah.11g040120 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.3e-07 59.3 81 34.6
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 9.3e-07 59.3 68 42.6
Ca_23900_v3 Cicer arietinum L. HOM05D004650 ORTHO05D005715 9.3e-07 59.3 113 27.4
Lsat_1_v5_gn_6_47180 Lactuca sativa HOM05D003915 ORTHO05D001516 9.3e-07 59.3 94 33.0
Manes.04G086301 Manihot esculenta HOM05D004650 ORTHO05D005715 9.3e-07 59.3 118 27.1
Rhsim11G0108900 Rhododendron simsii HOM05D017214 ORTHO05D018100 9.3e-07 59.3 124 37.9
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 1.2e-06 58.9 138 27.5
Ah.14g081710 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.6e-06 58.5 81 34.6
Rhsim11G0006600 Rhododendron simsii HOM05D008219 ORTHO05D018100 1.6e-06 58.5 254 27.2
Atru.chr5.3088 Acer truncatum HOM05D004650 ORTHO05D005715 2.1e-06 58.2 118 27.1
CDE02G0935 Ceratophyllum demersum HOM05D004650 ORTHO05D005715 2.7e-06 57.8 89 34.8
FAN15G0405 Fragaria x ananassa HOM05D004650 ORTHO05D005715 2.7e-06 57.8 142 25.4
Rhsim08G0158700 Rhododendron simsii HOM05D008219 ORTHO05D340272 2.7e-06 57.8 109 34.9
RcHm_v2.0_Chr6g0266121 Rosa chinensis HOM05D004650 ORTHO05D005715 2.7e-06 57.8 115 28.7
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.7e-06 57.8 77 36.4
FAN27G3342 Fragaria x ananassa HOM05D004650 ORTHO05D005715 3.5e-06 57.4 120 28.3
MD17G1180400 Malus domestica HOM05D000428 ORTHO05D000582 3.5e-06 57.4 139 30.9
Sc18g0000360 Simmondsia chinensis HOM05D009348 ORTHO05D030613 3.5e-06 57.4 83 32.5
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 3.5e-06 57.4 124 33.1
Actinidia15202 Actinidia chinensis HOM05D012898 ORTHO05D009356 4.6e-06 57.0 63 41.3
Lsat_1_v5_gn_2_14820 Lactuca sativa HOM05D002777 ORTHO05D001516 4.6e-06 57.0 101 31.7
Lsat_1_v5_gn_3_111820 Lactuca sativa HOM05D003915 ORTHO05D005386 4.6e-06 57.0 109 29.4
Lj2g0005575 Lotus japonicus HOM05D002777 ORTHO05D001516 4.6e-06 57.0 118 29.7
FvH4_7g12280 Fragaria vesca HOM05D004650 ORTHO05D005715 6.0e-06 56.6 137 26.3
FAN10G1385 Fragaria x ananassa HOM05D004650 ORTHO05D005715 6.0e-06 56.6 137 26.3
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.0e-06 56.6 137 29.2
Ah.05g173090 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.8e-06 56.2 63 36.5
Cfa005063 Carpinus fangiana HOM05D004650 ORTHO05D005715 7.8e-06 56.2 113 27.4
FAN24G0050 Fragaria x ananassa HOM05D004650 ORTHO05D005715 7.8e-06 56.2 111 27.9
Lj4g0013222 Lotus japonicus HOM05D002777 ORTHO05D001516 7.8e-06 56.2 128 29.7
Os04g0682400 Oryza sativa ssp. japonica HOM05D000428 ORTHO05D001253 7.8e-06 56.2 92 30.4
Rhsim08G0243500 Rhododendron simsii HOM05D010265 ORTHO05D009356 7.8e-06 56.2 166 33.1
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.8e-06 56.2 71 35.2
GSVIVG01024222001 Vitis vinifera HOM05D004650 ORTHO05D005715 7.8e-06 56.2 113 28.3


User provided reference genes

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