Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0052100 Rhododendron simsii HOM05D030800 ORTHO05D030536 8.2e-140 500.4 249 100.0
RhsimUnG0165600 Rhododendron simsii HOM05D030800 ORTHO05D030536 8.2e-140 500.4 249 100.0
Rhsim07G0194000 Rhododendron simsii HOM05D030800 ORTHO05D030536 8.8e-110 400.6 248 82.7
Rhsim07G0194100 Rhododendron simsii HOM05D030800 ORTHO05D030536 1.0e-105 387.1 248 80.6
vmacro22579 Vaccinium macrocarpon HOM05D001885 ORTHO05D001871 3.5e-50 202.6 211 56.9
Actinidia39404 Actinidia chinensis HOM05D000896 ORTHO05D000594 5.5e-11 72.4 82 45.1
Gorai.013G061700 Gossypium raimondii HOM05D015798 ORTHO05D022811 2.7e-10 70.1 133 29.3
Actinidia23083 Actinidia chinensis HOM05D000896 ORTHO05D000594 6.1e-10 68.9 94 44.7
Cfa004777 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.0e-09 68.2 83 42.2
Cfa004691 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.4e-09 67.8 81 43.2
Actinidia23084 Actinidia chinensis HOM05D000896 ORTHO05D000594 2.3e-09 67.0 83 44.6
Cfa004709 Carpinus fangiana HOM05D000896 ORTHO05D000594 2.3e-09 67.0 81 42.0
Cfa004785 Carpinus fangiana HOM05D000896 ORTHO05D000594 3.0e-09 66.6 83 44.6
Ciclev10030180m.g Citrus clementina HOM05D000896 ORTHO05D000594 3.0e-09 66.6 80 51.2
Gohir.D13G014966 Gossypium hirsutum HOM05D015798 ORTHO05D022811 3.0e-09 66.6 143 31.5
Gorai.013G016400 Gossypium raimondii HOM05D015798 ORTHO05D000594 3.0e-09 66.6 143 31.5
Oeu028491.1 Olea europaea HOM05D000896 ORTHO05D000594 3.0e-09 66.6 117 39.3
Dinv40964 Davidia involucrata HOM05D000896 ORTHO05D000594 6.7e-09 65.5 85 43.5
Dinv40965 Davidia involucrata HOM05D000896 ORTHO05D000594 6.7e-09 65.5 84 42.9
Gohir.A13G066051 Gossypium hirsutum HOM05D015798 ORTHO05D022811 1.2e-08 64.7 134 28.4
Medtr5g092880 Medicago truncatula HOM05D000896 ORTHO05D000594 1.2e-08 64.7 83 41.0
QL11p026956 Quercus lobata HOM05D000896 ORTHO05D000594 2.0e-08 63.9 115 36.5
Actinidia04066 Actinidia chinensis HOM05D000896 ORTHO05D000594 2.6e-08 63.5 111 39.6
Phvul.008G266500 Phaseolus vulgaris HOM05D000896 ORTHO05D000594 3.3e-08 63.2 78 41.0
QL11p023124 Quercus lobata HOM05D000896 ORTHO05D000594 3.3e-08 63.2 108 36.1
Haze_00227 Corylus avellana HOM05D000896 ORTHO05D000594 4.4e-08 62.8 102 36.3
Phvul.008G194000 Phaseolus vulgaris HOM05D000896 ORTHO05D000594 4.4e-08 62.8 78 39.7
Thecc.10G126800 Theobroma cacao HOM05D000896 ORTHO05D000594 4.4e-08 62.8 80 43.8
Cfa004783 Carpinus fangiana HOM05D000896 ORTHO05D000594 5.7e-08 62.4 81 43.2
Dinv08221 Davidia involucrata HOM05D000896 ORTHO05D000594 5.7e-08 62.4 85 42.4
Gohir.D13G054833 Gossypium hirsutum HOM05D015798 ORTHO05D022811 5.7e-08 62.4 133 27.8
Psat0s5759g0040 Pisum sativum HOM05D000896 ORTHO05D000594 5.7e-08 62.4 139 31.7
Psat4g122800 Pisum sativum HOM05D000896 ORTHO05D000594 5.7e-08 62.4 139 31.7
Haze_00193 Corylus avellana HOM05D000896 ORTHO05D000594 9.7e-08 61.6 123 32.5
COL.COLO4_02946 Corchorus olitorius HOM05D000896 ORTHO05D000594 1.7e-07 60.8 80 38.8
DCAR_025815 Daucus carota HOM05D000896 ORTHO05D000594 1.7e-07 60.8 77 40.3
Solyc02g032270.1 Solanum lycopersicum HOM05D000896 ORTHO05D000594 1.7e-07 60.8 221 29.4
TPR.G1144 Trifolium pratense HOM05D000896 ORTHO05D000594 1.7e-07 60.8 85 41.2
Cfa018818 Carpinus fangiana HOM05D000896 ORTHO05D000594 2.2e-07 60.5 80 41.2
CiPaw.14G107900 Carya illinoinensis HOM05D000896 ORTHO05D000594 2.2e-07 60.5 105 38.1
Actinidia23082 Actinidia chinensis HOM05D000896 ORTHO05D000594 2.8e-07 60.1 84 41.7
QL05p083988 Quercus lobata HOM05D000896 ORTHO05D000594 2.8e-07 60.1 147 31.3
Cfa004780 Carpinus fangiana HOM05D000896 ORTHO05D000594 3.7e-07 59.7 96 35.4
Cfa005673 Carpinus fangiana HOM05D000896 ORTHO05D000594 4.8e-07 59.3 114 31.6
Duzib114G1002 Durio zibethinus HOM05D000896 ORTHO05D000594 4.8e-07 59.3 81 37.0
Nitab4.5_0008682g0010 Nicotiana tabacum HOM05D000896 ORTHO05D000594 4.8e-07 59.3 87 40.2
Psat4g120360 Pisum sativum HOM05D000896 ORTHO05D000594 4.8e-07 59.3 138 30.4
Thecc.10G130500 Theobroma cacao HOM05D000896 ORTHO05D000594 4.8e-07 59.3 80 40.0
TPR.G12242 Trifolium pratense HOM05D000896 ORTHO05D000594 6.3e-07 58.9 85 38.8
Cfa005655 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.2e-07 58.5 83 37.3
Cfa016216 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.2e-07 58.5 97 41.2
Glyma.11G055000 Glycine max HOM05D000896 ORTHO05D000594 8.2e-07 58.5 163 31.9
Psat5g258240 Pisum sativum HOM05D000896 ORTHO05D000594 1.1e-06 58.2 113 32.7
QL02p098711 Quercus lobata HOM05D000896 ORTHO05D000594 1.1e-06 58.2 94 38.3
Cfa004781 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.4e-06 57.8 96 36.5
Haze_00191 Corylus avellana HOM05D000896 ORTHO05D000594 1.4e-06 57.8 81 37.0
Medtr7g098870 Medicago truncatula HOM05D000896 ORTHO05D000594 1.4e-06 57.8 81 35.8
Peaxi162Scf00198g01526 Petunia axillaris HOM05D000896 ORTHO05D000594 1.8e-06 57.4 116 33.6
Phvul.006G044300 Phaseolus vulgaris HOM05D000896 ORTHO05D000594 1.8e-06 57.4 90 36.7
Glyma.02G291400 Glycine max HOM05D000896 ORTHO05D000594 2.4e-06 57.0 126 30.2
Thecc.10G126400 Theobroma cacao HOM05D000896 ORTHO05D000594 2.4e-06 57.0 80 41.2
Thecc.10G130700 Theobroma cacao HOM05D000896 ORTHO05D000594 2.4e-06 57.0 80 38.8
Cfa004784 Carpinus fangiana HOM05D000896 ORTHO05D000594 3.1e-06 56.6 80 38.8
Cfa016248 Carpinus fangiana HOM05D000896 ORTHO05D000594 3.1e-06 56.6 58 43.1
Glyma.03G105900 Glycine max HOM05D000896 ORTHO05D000594 3.1e-06 56.6 163 30.7
Gohir.D02G053350 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.1e-06 56.6 99 35.4
QL09p018688 Quercus lobata HOM05D000896 ORTHO05D000594 3.1e-06 56.6 78 39.7
QL12p008948 Quercus lobata HOM05D003226 ORTHO05D000594 3.1e-06 56.6 98 37.8
Duzib114G0938 Durio zibethinus HOM05D000896 ORTHO05D000594 4.1e-06 56.2 81 35.8
Gohir.A02G044702 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.1e-06 56.2 107 34.6
Gohir.D02G050732 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.1e-06 56.2 99 35.4
Gorai.005G056000 Gossypium raimondii HOM05D000896 ORTHO05D000594 4.1e-06 56.2 99 35.4
Peaxi162Scf00493g00048 Petunia axillaris HOM05D000896 ORTHO05D000594 4.1e-06 56.2 99 37.4
Gohir.D13G055275 Gossypium hirsutum HOM05D000896 ORTHO05D000594 5.3e-06 55.8 66 34.8
Manes.09G146800 Manihot esculenta HOM05D000896 ORTHO05D000594 5.3e-06 55.8 97 34.0
QL03p040404 Quercus lobata HOM05D000896 ORTHO05D000594 5.3e-06 55.8 153 32.0
Sopen02g010620 Solanum pennellii HOM05D000896 ORTHO05D000594 5.3e-06 55.8 180 31.7
Duzib106G1665 Durio zibethinus HOM05D000896 ORTHO05D000594 7.0e-06 55.5 97 32.0
Phvul.010G000400 Phaseolus vulgaris HOM05D000896 ORTHO05D000594 7.0e-06 55.5 101 33.7
Ciclev10033660m.g Citrus clementina HOM05D000896 ORTHO05D000594 9.1e-06 55.1 78 38.5
Manes.14G006500 Manihot esculenta HOM05D000896 ORTHO05D000594 9.1e-06 55.1 144 29.9
Nitab4.5_0000138g0240 Nicotiana tabacum HOM05D000896 ORTHO05D000594 9.1e-06 55.1 75 42.7


User provided reference genes

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