Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 1.6e-82 309.3 151 100.0
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 9.6e-67 256.9 184 73.9
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 1.1e-57 226.9 182 64.8
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 1.1e-57 226.9 186 64.5
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 3.2e-54 215.3 179 63.1
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 4.2e-54 214.9 185 61.1
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 9.3e-54 213.8 183 61.7
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.2e-53 213.4 184 61.4
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 2.1e-53 212.6 179 60.3
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.7e-53 212.2 182 61.5
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 7.9e-53 210.7 183 59.6
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 1.0e-52 210.3 182 59.9
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 2.3e-52 209.1 156 67.9
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.1e-52 208.0 179 59.2
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 5.1e-52 208.0 179 62.0
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 6.7e-52 207.6 179 58.7
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.7e-52 207.6 179 58.7
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.7e-52 207.6 179 58.7
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.5e-51 206.5 179 58.1
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 1.9e-51 206.1 179 59.8
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 1.9e-51 206.1 184 59.2
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 7.4e-51 204.1 181 60.2
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 7.4e-51 204.1 184 57.6
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 7.4e-51 204.1 179 58.7
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 9.6e-51 203.8 179 60.3
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 2.1e-50 202.6 179 59.8
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 3.7e-50 201.8 179 57.5
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 3.7e-50 201.8 184 57.1
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 3.7e-50 201.8 179 59.2
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 4.8e-50 201.4 179 60.3
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 6.2e-50 201.1 181 59.7
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 8.1e-50 200.7 179 56.4
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 8.1e-50 200.7 179 59.2
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.1e-49 200.3 179 57.5
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 1.8e-49 199.5 179 59.2
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 1.8e-49 199.5 179 57.0
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 2.4e-49 199.1 179 58.1
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 2.4e-49 199.1 181 59.1
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 2.4e-49 199.1 179 57.0
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 2.4e-49 199.1 179 57.0
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 3.1e-49 198.7 184 59.2
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 4.0e-49 198.4 184 55.4
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 5.3e-49 198.0 182 56.0
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 5.3e-49 198.0 182 56.0
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 5.3e-49 198.0 179 58.7
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 6.9e-49 197.6 179 57.5
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 6.9e-49 197.6 182 56.0
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 9.0e-49 197.2 183 55.7
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 9.0e-49 197.2 179 59.2
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 9.0e-49 197.2 182 56.0
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 9.0e-49 197.2 181 58.0
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 9.0e-49 197.2 182 56.0
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 9.0e-49 197.2 183 57.9
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 1.2e-48 196.8 182 55.5
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 1.2e-48 196.8 184 58.2
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.2e-48 196.8 179 59.8
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.2e-48 196.8 179 58.1
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 1.5e-48 196.4 181 57.5
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.5e-48 196.4 179 58.7
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 2.0e-48 196.1 179 57.5
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 2.0e-48 196.1 183 58.5
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 3.4e-48 195.3 179 57.0
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 3.4e-48 195.3 183 57.4
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 4.5e-48 194.9 178 56.7
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 5.8e-48 194.5 179 58.1
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 5.8e-48 194.5 179 57.5
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 7.6e-48 194.1 179 57.5
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 7.6e-48 194.1 182 56.0
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.0e-47 193.7 179 55.9
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 1.0e-47 193.7 181 56.9
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 1.3e-47 193.4 182 55.5
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 1.3e-47 193.4 182 54.9
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 1.3e-47 193.4 179 55.9
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 2.2e-47 192.6 182 54.9
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.2e-47 192.6 181 58.0
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 2.2e-47 192.6 179 54.7
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 2.9e-47 192.2 179 55.3
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 3.8e-47 191.8 179 57.0
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 8.4e-47 190.7 179 58.1
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 1.1e-46 190.3 182 53.8
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 1.4e-46 189.9 179 55.3
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 1.9e-46 189.5 179 54.7
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 1.9e-46 189.5 179 55.9
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.5e-46 189.1 181 56.9
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 3.2e-46 188.7 182 52.2
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 3.2e-46 188.7 179 56.4
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 4.2e-46 188.3 196 51.5
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 4.2e-46 188.3 182 53.3
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 4.2e-46 188.3 181 52.5
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 9.3e-46 187.2 184 54.9
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 1.6e-45 186.4 179 55.9
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 1.6e-45 186.4 182 52.7
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 1.6e-45 186.4 179 55.9
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 1.6e-45 186.4 179 54.2
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.1e-45 186.0 179 54.2
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.1e-45 186.0 179 54.2
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 2.1e-45 186.0 179 56.4
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 2.7e-45 185.7 179 53.6
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 2.7e-45 185.7 181 51.9
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 3.5e-45 185.3 181 52.5
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 1.3e-44 183.3 181 52.5
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.3e-44 183.3 184 53.3
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 1.3e-44 183.3 179 52.5
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 2.8e-42 175.6 179 51.4
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 1.3e-39 166.8 234 43.2
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 6.5e-39 164.5 159 57.9
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 2.3e-36 156.0 190 50.5
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 5.3e-33 144.8 171 49.1
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 7.7e-32 141.0 132 58.3
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.9e-30 136.3 184 41.3
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 3.2e-30 135.6 189 39.7
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.9e-22 109.8 190 33.2
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 4.7e-21 105.1 183 35.0
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 6.1e-21 104.8 132 47.0
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.6e-16 90.1 139 35.3
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.7e-15 86.7 139 35.3
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 4.8e-10 68.6 97 40.2
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 8.2e-10 67.8 97 39.2
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 1.4e-09 67.0 55 54.5


User provided reference genes

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