Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0027900 Rhododendron simsii HOM05D068098 ORTHO05D002316 1.7e-102 375.9 185 100.0
Rhsim03G0189500 Rhododendron simsii HOM05D068098 ORTHO05D002316 5.3e-43 178.3 176 58.0
Rhsim12G0024100 Rhododendron simsii HOM05D002301 ORTHO05D002316 7.2e-16 88.2 88 56.8
Rhsim03G0189300 Rhododendron simsii HOM05D002301 ORTHO05D002316 3.6e-15 85.9 83 57.8
RhsimUnG0027700 Rhododendron simsii HOM05D002301 ORTHO05D002316 3.6e-15 85.9 83 57.8
vmacro06644 Vaccinium macrocarpon HOM05D002301 ORTHO05D002316 1.4e-14 84.0 150 42.7
Migut.F00316 Erythranthe guttata HOM05D002301 ORTHO05D002316 2.0e-10 70.1 136 42.6
Dinv35234 Davidia involucrata HOM05D002301 ORTHO05D002316 5.9e-10 68.6 95 48.4
unitig_37.g11966 Utricularia gibba HOM05D002301 ORTHO05D002316 1.7e-09 67.0 147 36.1
Oeu016788.1 Olea europaea HOM05D002301 ORTHO05D002316 2.3e-09 66.6 79 50.6
SalBow4G0317 Salvia bowleyana HOM05D002301 ORTHO05D002316 2.9e-09 66.2 80 51.2
unitig_46.g18799 Utricularia gibba HOM05D002301 ORTHO05D002316 6.5e-09 65.1 94 45.7
vmacro09824 Vaccinium macrocarpon HOM05D002301 ORTHO05D002316 1.1e-08 64.3 97 46.4
Rhsim09G0199500 Rhododendron simsii HOM05D002301 ORTHO05D002316 1.5e-08 63.9 121 40.5
HanXRQChr06g0182191 Helianthus annuus HOM05D002301 ORTHO05D002316 4.2e-08 62.4 131 40.5
Lj1P1002T21 Lonicera japonica HOM05D002301 ORTHO05D002316 4.2e-08 62.4 148 36.5
Oeu045379.1 Olea europaea HOM05D002301 ORTHO05D002316 4.2e-08 62.4 101 40.6
Cc00_g31430 Coffea canephora HOM05D002301 ORTHO05D002316 5.5e-08 62.0 120 41.7
RcHm_v2.0_Chr6g0247211 Rosa chinensis HOM05D002301 ORTHO05D002316 5.5e-08 62.0 117 39.3
Migut.F01096 Erythranthe guttata HOM05D002301 ORTHO05D002316 7.2e-08 61.6 82 43.9
Hma1.2p1_0227F.1_g096080 Hydrangea macrophylla HOM05D002301 ORTHO05D002316 7.2e-08 61.6 121 39.7
HanXRQChr06g0182181 Helianthus annuus HOM05D002301 ORTHO05D002316 9.5e-08 61.2 131 36.6
DCAR_009381 Daucus carota HOM05D002301 ORTHO05D002316 1.2e-07 60.8 88 40.9
CAN.G236.17 Capsicum annuum HOM05D002301 ORTHO05D002316 2.1e-07 60.1 120 40.0
Nn2g11398 Nelumbo nucifera HOM05D002301 ORTHO05D002316 2.1e-07 60.1 125 33.6
FAN15G0279 Fragaria x ananassa HOM05D002301 ORTHO05D002316 2.8e-07 59.7 117 38.5
SGA_v2.0_scaffold60G21091 Striga asiatica HOM05D002301 ORTHO05D002316 2.8e-07 59.7 96 42.7
CSS0021609 Camellia sinensis var. sinensis HOM05D002301 ORTHO05D002316 3.6e-07 59.3 98 37.8
FAN27G2244 Fragaria x ananassa HOM05D002301 ORTHO05D002316 3.6e-07 59.3 89 43.8
FvH4_2g02750 Fragaria vesca HOM05D002301 ORTHO05D002316 6.1e-07 58.5 117 37.6
HanXRQChr16g0510521 Helianthus annuus HOM05D002301 ORTHO05D002316 6.1e-07 58.5 120 39.2
Os09g0571200 Oryza sativa ssp. japonica HOM05D002301 ORTHO05D002316 6.1e-07 58.5 138 34.1
Solyc03g025340.1 Solanum lycopersicum HOM05D002301 ORTHO05D002316 8.0e-07 58.2 80 45.0
Hma1.2p1_0101F.1_g049330 Hydrangea macrophylla HOM05D002301 ORTHO05D002316 1.0e-06 57.8 92 42.4
CsaV3_3G017350 Cucumis sativus L. HOM05D002301 ORTHO05D002316 1.4e-06 57.4 121 38.0
CAN.G354.67 Capsicum annuum HOM05D002301 ORTHO05D002316 1.8e-06 57.0 120 39.2
Nitab4.5_0000080g0160 Nicotiana tabacum HOM05D002301 ORTHO05D002316 2.3e-06 56.6 120 38.3
Sopen03g004180 Solanum pennellii HOM05D002301 ORTHO05D002316 2.3e-06 56.6 80 43.8
PGSC0003DMG400010115 Solanum tuberosum HOM05D002301 ORTHO05D002316 2.3e-06 56.6 80 43.8
Actinidia03130 Actinidia chinensis HOM05D002301 ORTHO05D002316 3.0e-06 56.2 75 49.3
MELO3C006931.2 Cucumis melo HOM05D002301 ORTHO05D002316 3.0e-06 56.2 81 43.2
MD01G1205900 Malus domestica HOM05D002301 ORTHO05D002316 3.0e-06 56.2 121 40.5
Zm00001eb307650 Zea mays HOM05D002301 ORTHO05D002316 3.0e-06 56.2 94 42.6
PGSC0003DMG400029920 Solanum tuberosum HOM05D002301 ORTHO05D002316 4.0e-06 55.8 121 38.0
HPP92_025784 Vanilla planifolia HOM05D002301 ORTHO05D002316 4.0e-06 55.8 90 41.1
Sc13g0008940 Simmondsia chinensis HOM05D002301 ORTHO05D002316 6.8e-06 55.1 132 36.4
Sopen06g011900 Solanum pennellii HOM05D002301 ORTHO05D002316 6.8e-06 55.1 121 37.2
CANSAT35G1131 Cannabis sativa HOM05D002301 ORTHO05D002316 8.8e-06 54.7 90 33.3
Lalb_Chr19g0130701 Lupinus albus HOM05D002301 ORTHO05D002316 8.8e-06 54.7 109 36.7
Peaxi162Scf00057g00021 Petunia axillaris HOM05D002301 ORTHO05D002316 8.8e-06 54.7 120 37.5
Peaxi162Scf00057g10023 Petunia axillaris HOM05D002301 ORTHO05D002316 8.8e-06 54.7 120 37.5
Peaxi162Scf50127g00001 Petunia axillaris HOM05D002301 ORTHO05D002316 8.8e-06 54.7 120 37.5
Solyc06g036110.1 Solanum lycopersicum HOM05D002301 ORTHO05D002316 8.8e-06 54.7 80 42.5
TAR633G2301 Trochodendron aralioides HOM05D002301 ORTHO05D002316 8.8e-06 54.7 90 31.1


User provided reference genes

Program Settings