Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0020800 Rhododendron simsii HOM05D001633 ORTHO05D006978 2.4e-34 148.3 74 100.0
Actinidia37865 Actinidia chinensis HOM05D001633 ORTHO05D006978 5.8e-25 117.1 66 90.9
Duzib128G0040 Durio zibethinus HOM05D001633 ORTHO05D006978 4.9e-24 114.0 67 85.1
vmacro07590 Vaccinium macrocarpon HOM05D001633 ORTHO05D006978 2.4e-23 111.7 60 95.0
GSVIVG01025824001 Vitis vinifera HOM05D001633 ORTHO05D006978 3.2e-23 111.3 62 85.5
CANSAT64G1525 Cannabis sativa HOM05D001633 ORTHO05D006978 4.2e-23 110.9 70 80.0
SGA_v2.0_scaffold90G27743 Striga asiatica HOM05D001633 ORTHO05D006978 5.4e-23 110.5 62 83.9
Gohir.A08G014100 Gossypium hirsutum HOM05D001633 ORTHO05D006978 2.1e-22 108.6 67 80.6
Gohir.D08G020700 Gossypium hirsutum HOM05D001633 ORTHO05D006978 2.1e-22 108.6 67 80.6
Gorai.004G020000 Gossypium raimondii HOM05D001633 ORTHO05D006978 2.1e-22 108.6 67 80.6
Ciclev10012325m.g Citrus clementina HOM05D001633 ORTHO05D006978 2.7e-22 108.2 68 80.9
DCAR_014752 Daucus carota HOM05D001633 ORTHO05D006978 2.7e-22 108.2 70 75.7
Dinv10882 Davidia involucrata HOM05D001633 ORTHO05D006978 2.7e-22 108.2 68 80.9
SalBow5G3943 Salvia bowleyana HOM05D001633 ORTHO05D006978 3.5e-22 107.8 68 77.9
Sabra06G0021700 Salix brachista HOM05D001633 ORTHO05D006978 4.6e-22 107.5 70 77.1
Atru.chr1.1514 Acer truncatum HOM05D001633 ORTHO05D006978 6.0e-22 107.1 62 83.9
Migut.D02067 Erythranthe guttata HOM05D001633 ORTHO05D006978 6.0e-22 107.1 62 82.3
Potri.016G029700 Populus trichocarpa HOM05D001633 ORTHO05D006978 6.0e-22 107.1 67 80.6
ECA232G4905 Erigeron canadensis HOM05D000887 ORTHO05D000908 1.0e-21 106.3 68 76.5
FvH4_1g28950 Fragaria vesca HOM05D001633 ORTHO05D006978 1.3e-21 105.9 70 75.7
Potri.006G032500 Populus trichocarpa HOM05D001633 ORTHO05D006978 1.3e-21 105.9 62 82.3
CiPaw.10G044200 Carya illinoinensis HOM05D001633 ORTHO05D006978 1.7e-21 105.5 62 83.9
HanXRQChr15g0492071 Helianthus annuus HOM05D001633 ORTHO05D006978 2.3e-21 105.1 68 76.5
Thecc.05G119800 Theobroma cacao HOM05D001633 ORTHO05D006978 2.3e-21 105.1 62 83.9
TAR623G1603 Trochodendron aralioides HOM05D001633 ORTHO05D006978 2.3e-21 105.1 68 77.9
Haze_20294 Corylus avellana HOM05D001633 ORTHO05D006978 3.0e-21 104.8 70 77.1
Sabra16G0033600 Salix brachista HOM05D001633 ORTHO05D006978 3.0e-21 104.8 62 82.3
Migut.O00269 Erythranthe guttata HOM05D001633 ORTHO05D006978 3.9e-21 104.4 62 80.6
MSTRG.9715 Avicennia marina HOM05D001633 ORTHO05D006978 5.1e-21 104.0 70 74.3
COL.COLO4_06867 Corchorus olitorius HOM05D001633 ORTHO05D006978 8.7e-21 103.2 62 80.6
Lsat_1_v5_gn_0_10441 Lactuca sativa HOM05D001633 ORTHO05D006978 8.7e-21 103.2 64 82.8
Lj5A167T35 Lonicera japonica HOM05D001633 ORTHO05D006978 8.7e-21 103.2 68 75.0
Manes.08G065800 Manihot esculenta HOM05D001633 ORTHO05D006978 8.7e-21 103.2 62 79.0
arahy.Tifrunner.gnm1.ann1.XU41E3 Arachis hypogaea HOM05D001633 ORTHO05D006978 1.1e-20 102.8 70 70.0
Cc09_g07680 Coffea canephora HOM05D001633 ORTHO05D006978 1.1e-20 102.8 61 83.6
Nn7g37072 Nelumbo nucifera HOM05D001633 ORTHO05D006978 1.1e-20 102.8 68 72.1
SalBow8G4834 Salvia bowleyana HOM05D001633 ORTHO05D006978 1.1e-20 102.8 68 76.5
Nitab4.5_0000782g0020 Nicotiana tabacum HOM05D001633 ORTHO05D006978 1.5e-20 102.4 61 82.0
Prupe.7G022300 Prunus persica HOM05D001633 ORTHO05D006978 1.5e-20 102.4 70 72.9
TWI74G0653 Tripterygium wilfordii HOM05D001633 ORTHO05D006978 1.5e-20 102.4 62 77.4
FAN26G0675 Fragaria x ananassa HOM05D001633 ORTHO05D006978 1.9e-20 102.1 62 80.6
arahy.Tifrunner.gnm1.ann1.36JDZG Arachis hypogaea HOM05D001633 ORTHO05D006978 2.5e-20 101.7 70 70.0
EL10Ac3g07334 Beta vulgaris HOM05D001633 ORTHO05D006978 2.5e-20 101.7 68 75.0
TPR.G27970 Trifolium pratense HOM05D001633 ORTHO05D006978 3.3e-20 101.3 70 71.4
Solyc03g098640.4 Solanum lycopersicum HOM05D001633 ORTHO05D006978 4.3e-20 100.9 61 82.0
Sopen03g029350 Solanum pennellii HOM05D001633 ORTHO05D006978 4.3e-20 100.9 61 82.0
PGSC0003DMG400010174 Solanum tuberosum HOM05D001633 ORTHO05D006978 4.3e-20 100.9 61 82.0
Aqoxy4G00837 Aquilegia oxysepala HOM05D001633 ORTHO05D006978 5.6e-20 100.5 62 75.8
Eucgr.K01688 Eucalyptus grandis HOM05D001633 ORTHO05D006978 5.6e-20 100.5 62 79.0
Lj1g0012111 Lotus japonicus HOM05D001633 ORTHO05D006978 5.6e-20 100.5 70 71.4
MD12G1111600 Malus domestica HOM05D001633 ORTHO05D006978 5.6e-20 100.5 62 77.4
HPP92_004128 Vanilla planifolia HOM05D001633 ORTHO05D006978 5.6e-20 100.5 60 80.0
FAN23G2036 Fragaria x ananassa HOM05D001633 ORTHO05D006978 7.3e-20 100.1 60 83.3
MBI13_g13128_MAGBIO Magnolia biondii HOM05D001633 ORTHO05D006978 7.3e-20 100.1 62 77.4
MD14G1100800 Malus domestica HOM05D001633 ORTHO05D006978 7.3e-20 100.1 62 77.4
Os11g0131200 Oryza sativa ssp. japonica HOM05D001633 ORTHO05D006978 7.3e-20 100.1 60 80.0
Os12g0127900 Oryza sativa ssp. japonica HOM05D001633 ORTHO05D006978 7.3e-20 100.1 60 80.0
CAN.G929.17 Capsicum annuum HOM05D001633 ORTHO05D006978 9.6e-20 99.8 61 78.7
RcHm_v2.0_Chr3g0494371 Rosa chinensis HOM05D001633 ORTHO05D006978 1.3e-19 99.4 68 73.5
Sc19g0007890 Simmondsia chinensis HOM05D001633 ORTHO05D006978 1.3e-19 99.4 62 75.8
ATR1096G055 Amborella trichopoda HOM05D001633 ORTHO05D006978 1.6e-19 99.0 62 77.4
Glyma.19G125200 Glycine max HOM05D001633 ORTHO05D006978 1.6e-19 99.0 70 68.6
Ah.13g077340 Amaranthus hybridus HOM05D001633 ORTHO05D006978 2.8e-19 98.2 68 70.6
arahy.Tifrunner.gnm1.ann1.76KEHH Arachis hypogaea HOM05D001633 ORTHO05D006978 3.6e-19 97.8 62 75.8
Hund19064 Selenicereus undatus HOM05D001633 ORTHO05D006978 3.6e-19 97.8 65 73.8
THA.LOC104799686 Tarenaya hassleriana HOM05D001633 ORTHO05D006978 8.1e-19 96.7 70 70.0
Phvul.001G116800 Phaseolus vulgaris HOM05D001633 ORTHO05D006978 1.1e-18 96.3 67 71.6
VMungo0331G0742 Vigna mungo HOM05D001633 ORTHO05D006978 1.1e-18 96.3 67 71.6
PSO384G2730 Papaver somniferum HOM05D001633 ORTHO05D006978 1.4e-18 95.9 70 64.3
Psat0ss9348g0040 Pisum sativum HOM05D001633 ORTHO05D006978 1.4e-18 95.9 70 68.6
Zm00001eb195970 Zea mays HOM05D001633 ORTHO05D006978 1.4e-18 95.9 60 75.0
Ca_08353_v3 Cicer arietinum L. HOM05D001633 ORTHO05D006978 2.4e-18 95.1 61 75.4
Lalb_Chr14g0365401 Lupinus albus HOM05D001633 ORTHO05D006978 4.0e-18 94.4 62 71.0
PSO339G5762 Papaver somniferum HOM05D001633 ORTHO05D006978 4.0e-18 94.4 68 64.7
A03p09590 Brassica napus HOM05D001633 ORTHO05D006978 2.0e-17 92.0 68 69.1
BraA03t10276Z Brassica rapa HOM05D001633 ORTHO05D006978 2.0e-17 92.0 68 69.1
VMungo0464G1418 Vigna mungo HOM05D001633 ORTHO05D006978 2.6e-17 91.7 62 74.2
Medtr7g088590 Medicago truncatula HOM05D001633 ORTHO05D006978 3.4e-17 91.3 62 71.0
C03p11160 Brassica napus HOM05D001633 ORTHO05D006978 4.5e-17 90.9 68 67.6
SEGI_15989 Sequoiadendron giganteum HOM05D001633 ORTHO05D006978 4.5e-17 90.9 62 69.4
CARHR193150 Cardamine hirsuta HOM05D001633 ORTHO05D006978 5.8e-17 90.5 68 69.1
AUR62018431 Chenopodium quinoa HOM05D001633 ORTHO05D006978 5.8e-17 90.5 62 71.0
Aa31LG1G14230 Aethionema arabicum HOM05D001633 ORTHO05D006978 7.6e-17 90.1 62 72.6
BcaB08g36571 Brassica carinata HOM05D001633 ORTHO05D006978 7.6e-17 90.1 68 67.6
A10p19970 Brassica napus HOM05D001633 ORTHO05D006978 7.6e-17 90.1 68 67.6
BraA10t44072Z Brassica rapa HOM05D001633 ORTHO05D006978 7.6e-17 90.1 68 67.6
Carub.0006s1810 Capsella rubella HOM05D001633 ORTHO05D006978 7.6e-17 90.1 67 71.6
Sp6g24640 Schrenkiella parvula HOM05D001633 ORTHO05D006978 7.6e-17 90.1 67 68.7
BolC3t13586H Brassica oleracea HOM05D001633 ORTHO05D006978 9.9e-17 89.7 68 66.2
AUR62021002 Chenopodium quinoa HOM05D001633 ORTHO05D006978 9.9e-17 89.7 60 73.3
AL6G31270 Arabidopsis lyrata HOM05D001633 ORTHO05D006978 1.7e-16 89.0 67 70.1
BcaC04g19373 Brassica carinata HOM05D001633 ORTHO05D006978 2.2e-16 88.6 68 66.2
C09p56420 Brassica napus HOM05D002116 ORTHO05D002438 2.2e-16 88.6 68 66.2
BolC9t58510H Brassica oleracea HOM05D002116 ORTHO05D002438 2.2e-16 88.6 68 66.2
Thhalv10014288m.g Eutrema salsugineum HOM05D001633 ORTHO05D006978 2.2e-16 88.6 62 71.0
CsaV3_3G039850 Cucumis sativus L. HOM05D001633 ORTHO05D006978 3.8e-16 87.8 70 58.6
Oeu063717.1 Olea europaea HOM05D001633 ORTHO05D006978 4.9e-16 87.4 50 88.0
MELO3C009727.2 Cucumis melo HOM05D001633 ORTHO05D006978 1.1e-15 86.3 62 61.3
ClCG10G016490 Citrullus lanatus HOM05D001633 ORTHO05D006978 1.4e-15 85.9 62 62.9
AT5G19750 Arabidopsis thaliana HOM05D001633 ORTHO05D006978 2.4e-15 85.1 67 65.7
Sed0015895 Sechium edule HOM05D001633 ORTHO05D006978 5.4e-15 84.0 62 62.9
arahy.Tifrunner.gnm1.ann1.D0YQCK Arachis hypogaea HOM05D001633 ORTHO05D006978 2.7e-14 81.6 84 54.8
Nitab4.5_0003040g0100 Nicotiana tabacum HOM05D001633 ORTHO05D006978 2.7e-14 81.6 51 80.4
Sed0018982 Sechium edule HOM05D001633 ORTHO05D006978 4.6e-14 80.9 62 59.7
unitig_749.g13719 Utricularia gibba HOM05D001633 ORTHO05D006978 1.8e-13 79.0 58 60.3
DCAR_023242 Daucus carota HOM05D001633 ORTHO05D006978 5.1e-13 77.4 60 61.7
SGA_v2.0_scaffold103G30042 Striga asiatica HOM05D001633 ORTHO05D006978 6.7e-13 77.0 81 55.6
Cre06.g278800 Chlamydomonas reinhardtii HOM05D001633 ORTHO05D006978 8.7e-13 76.6 61 55.7
Pp3c8_1860 Physcomitrium patens HOM05D001633 ORTHO05D006978 3.3e-12 74.7 60 53.3
SMO340G0056 Selaginella moellendorffii HOM05D001633 ORTHO05D006978 4.3e-12 74.3 61 55.7
CBR_g31674 Chara braunii HOM05D001633 ORTHO05D006978 3.7e-11 71.2 63 52.4
AagrBONN_evm.TU.Sc2ySwM_362.1749 Anthoceros agrestis HOM05D001633 ORTHO05D006978 4.8e-11 70.9 61 50.8
unitig_26.g10115 Utricularia gibba HOM05D001633 ORTHO05D006978 6.2e-11 70.5 50 58.0
Mapoly0001s0503 Marchantia polymorpha HOM05D001633 ORTHO05D006978 1.4e-10 69.3 67 44.8
Mapoly0101s0003 Marchantia polymorpha HOM05D001633 ORTHO05D006978 1.4e-10 69.3 61 49.2
MCO11G168 Micromonas commoda HOM05D001633 ORTHO05D006978 1.3e-08 62.8 65 52.3
Pp3c11_2220 Physcomitrium patens HOM05D001633 ORTHO05D006978 4.9e-08 60.8 68 38.2
QL07p014182 Quercus lobata HOM05D001633 ORTHO05D006978 6.5e-08 60.5 32 87.5
AagrBONN_evm.TU.Sc2ySwM_344.1479 Anthoceros agrestis HOM05D001633 ORTHO05D006978 1.4e-07 59.3 67 38.8
Cc02_g30170 Coffea canephora HOM05D001633 ORTHO05D006978 3.2e-07 58.2 32 87.5
PRCOL_00001315 Prasinoderma coloniale HOM05D001633 ORTHO05D006978 9.3e-07 56.6 59 44.1
CSS0040401 Camellia sinensis var. sinensis HOM05D001633 ORTHO05D006978 1.6e-06 55.8 43 67.4
CDE07G0099 Ceratophyllum demersum HOM05D001633 ORTHO05D002880 1.6e-06 55.8 61 42.6
Hund24515 Selenicereus undatus HOM05D001633 ORTHO05D006978 1.6e-06 55.8 39 74.4
TPR.G27086 Trifolium pratense HOM05D001633 ORTHO05D002880 2.7e-06 55.1 62 46.8
Atru.chr13.810 Acer truncatum HOM05D001633 ORTHO05D002880 3.5e-06 54.7 62 40.3
TWI12G0996 Tripterygium wilfordii HOM05D001633 ORTHO05D002880 4.6e-06 54.3 60 45.0
arahy.Tifrunner.gnm1.ann1.MX1GHC Arachis hypogaea HOM05D001633 ORTHO05D002880 6.0e-06 53.9 62 43.5
arahy.Tifrunner.gnm1.ann1.PDFB0Z Arachis hypogaea HOM05D001633 ORTHO05D002880 6.0e-06 53.9 62 43.5
Thhalv10025993m.g Eutrema salsugineum HOM05D001633 ORTHO05D002880 6.0e-06 53.9 62 45.2
Peaxi162Scf00171g00251 Petunia axillaris HOM05D001633 ORTHO05D006978 7.9e-06 53.5 50 58.0
Psat6g215720 Pisum sativum HOM05D001633 ORTHO05D002880 7.9e-06 53.5 67 43.3


User provided reference genes

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