Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-138 495.7 261 100.0
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-97 357.8 282 70.9
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-96 355.9 282 70.9
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-96 355.9 282 70.9
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.8e-96 354.8 282 70.2
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-80 303.5 288 61.1
Rhsim07G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-63 246.9 272 56.6
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-51 205.3 282 51.8
Rhsim11G0039400 Rhododendron simsii HOM05D000047 ORTHO05D000044 1.7e-31 140.6 138 61.6
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-30 137.9 315 36.2
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-30 137.9 315 36.2
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.9e-30 137.1 112 53.6
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.3e-30 136.3 112 53.6
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.3e-30 136.3 110 53.6
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-29 134.0 112 52.7
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-29 133.3 112 52.7
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-29 133.3 112 52.7
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-29 133.3 112 52.7
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.6e-29 132.9 128 48.4
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.8e-28 130.6 261 33.3
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.8e-24 115.2 99 48.5
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-22 109.0 295 30.8
Rhsim02G0074500 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.9e-20 101.7 195 39.5
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.5e-19 98.6 86 43.0
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-18 97.4 107 44.9
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-18 97.4 107 44.9
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-18 97.4 94 47.9
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.7e-18 96.3 93 48.4
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.9e-18 95.9 94 46.8
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.4e-18 95.5 93 47.3
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-17 94.7 85 41.2
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.7e-16 90.1 103 36.9
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-16 89.0 93 37.6
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.0e-15 86.7 89 37.1
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.0e-15 86.7 101 34.7
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.0e-15 86.7 102 34.3
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.9e-15 86.3 124 37.9
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 3.9e-15 86.3 118 33.9
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.6e-15 85.1 101 34.7
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.6e-15 85.1 101 34.7
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.6e-15 85.1 101 34.7
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-14 84.7 124 37.1
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-14 84.3 124 37.1
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-14 84.3 68 52.9
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.9e-14 84.0 124 37.1
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 3.3e-14 83.2 124 36.3
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.3e-14 82.0 112 33.9
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 9.5e-14 81.6 91 35.2
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 9.5e-14 81.6 91 35.2
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 9.5e-14 81.6 83 37.3
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.2e-13 81.3 99 38.4
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.2e-13 81.3 110 34.5
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 6.2e-13 79.0 109 33.9
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 6.2e-13 79.0 109 33.9
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 8.1e-13 78.6 91 35.2
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-12 77.8 124 33.9
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.4e-12 77.8 112 33.0
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.3e-12 77.0 80 38.8
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.0e-12 76.3 329 28.9
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.0e-12 76.3 100 35.0
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.8e-12 75.5 72 44.4
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 8.9e-12 75.1 90 37.8
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.5e-11 74.3 113 33.6
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.5e-11 74.3 113 33.6
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-11 73.9 101 29.7
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.8e-11 72.4 80 36.2
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 7.6e-11 72.0 113 32.7
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.3e-10 71.2 101 33.7
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.7e-10 70.9 101 32.7
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.7e-10 70.9 188 31.4
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-10 70.9 53 58.5
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.1e-09 68.2 109 30.3
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.4e-09 67.8 112 33.9
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.2e-09 66.6 112 33.0
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 3.2e-09 66.6 101 34.7
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 4.6e-08 62.8 101 32.7
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.6e-08 62.8 101 32.7
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.6e-08 62.8 101 32.7
Rhsim10G0070400 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-08 62.8 130 40.8
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.0e-08 62.4 101 30.7
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.0e-07 61.6 72 37.5
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 1.0e-07 61.6 170 26.5
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-07 61.6 89 31.5
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.3e-07 61.2 106 29.2
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 8.6e-07 58.5 196 25.0
PSO104G0253 Papaver somniferum HOM05D009650 ORTHO05D011166 8.6e-07 58.5 190 24.2


User provided reference genes

Program Settings