Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0003600 Rhododendron simsii HOM05D041844 ORTHO05D004107 9.3e-167 590.1 293 100.0
RhsimUnG0067000 Rhododendron simsii HOM05D041844 ORTHO05D004107 4.5e-113 411.8 215 97.7
Rhsim07G0151200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-43 180.6 423 33.6
Rhsim09G0050000 Rhododendron simsii HOM05D003191 ORTHO05D003656 2.7e-41 173.3 366 36.6
Rhsim08G0011600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-27 127.9 244 36.5
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.7e-25 120.2 463 25.9
Rhsim01G0063200 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.9e-25 118.6 445 27.6
vmacro14347 Vaccinium macrocarpon HOM05D002010 ORTHO05D001602 8.7e-24 115.2 106 55.7
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.7e-23 112.5 102 54.9
Dinv17963 Davidia involucrata HOM05D008850 ORTHO05D004107 1.5e-15 87.8 330 25.5
Eucgr.B01037 Eucalyptus grandis HOM05D000017 ORTHO05D000013 2.0e-15 87.4 126 37.3
Rhsim01G0148900 Rhododendron simsii HOM05D041844 ORTHO05D004107 2.8e-14 83.6 332 24.1
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.7e-14 83.2 375 24.5
Eucgr.H04539 Eucalyptus grandis HOM05D000017 ORTHO05D000013 4.8e-14 82.8 114 38.6
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.8e-14 82.8 341 25.5
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.1e-13 80.1 404 25.0
Rhsim05G0162200 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.4e-12 76.6 107 38.3
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.9e-11 73.6 100 36.0
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.9e-11 73.6 100 36.0
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.8e-11 73.2 167 31.7
Rhsim07G0160300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-10 71.6 106 35.8
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-10 71.2 99 38.4
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-10 71.2 99 38.4
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-10 69.7 172 29.1
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-10 69.7 111 36.0
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-10 69.7 107 31.8
TWI53G0252 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.2e-10 69.7 103 34.0
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.5e-10 69.3 172 29.1
TWI15G0100 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.5e-10 69.3 103 34.0
TWI15G0892 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.5e-10 69.3 103 34.0
TWI53G1859 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-09 68.2 103 35.0
Hma1.2p1_0512F.1_g169320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-09 67.8 362 23.5
Hma1.2p1_0327F.1_g126250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.6e-09 66.6 170 30.0
TWI15G0063 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.6e-09 66.6 103 32.0
TWI59G1326 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.6e-09 66.6 103 34.0
TWI09G1270 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.1e-09 65.9 103 34.0
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 7.9e-09 65.5 102 33.3
Hma1.2p1_0224F.1_g094540 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-08 65.1 100 31.0
Hma1.2p1_0048F.1_g028050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-08 64.7 100 31.0
RcHm_v2.0_Chr6g0266931 Rosa chinensis HOM05D000017 ORTHO05D000013 1.4e-08 64.7 101 34.7
Hma1.2p1_0327F.1_g126370 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-08 64.3 100 30.0
Sed0005941 Sechium edule HOM05D000017 ORTHO05D000013 1.8e-08 64.3 103 28.2
TPR.G31072 Trifolium pratense HOM05D000017 ORTHO05D000013 2.3e-08 63.9 103 33.0
FvH4_3g21022 Fragaria vesca HOM05D027620 ORTHO05D029384 3.0e-08 63.5 99 31.3
TWI09G1423 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.9e-08 63.2 100 32.0
Rhsim01G0020300 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.1e-08 62.8 103 29.1
Hma1.2p1_3404F.1_g335820 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.7e-08 62.4 101 33.7
Peaxi162Scf00789g00527 Petunia axillaris HOM05D000017 ORTHO05D000308 6.7e-08 62.4 111 30.6
TWI31G1298 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.7e-08 62.4 100 32.0
CANSAT56G2167 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-08 62.0 105 26.7
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 1.5e-07 61.2 101 32.7
TWI34G0618 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-07 61.2 100 29.0
TWI38G0306 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-07 61.2 100 29.0
Peaxi162Scf00199g00091 Petunia axillaris HOM05D000017 ORTHO05D000308 2.0e-07 60.8 111 26.1
TWI53G1157 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.6e-07 60.5 100 31.0
TWI79G0426 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.6e-07 60.5 100 31.0
CAN.G407.125 Capsicum annuum HOM05D000017 ORTHO05D000013 3.3e-07 60.1 326 24.5
Peaxi162Scf00275g00071 Petunia axillaris HOM05D000017 ORTHO05D000308 3.3e-07 60.1 107 31.8
TWI59G0629 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.3e-07 60.1 100 29.0
Sed0009528 Sechium edule HOM05D000017 ORTHO05D000308 4.4e-07 59.7 115 28.7
Atru.chr5.2370 Acer truncatum HOM05D000017 ORTHO05D000013 5.7e-07 59.3 105 30.5
Sed0000137 Sechium edule HOM05D000017 ORTHO05D000013 5.7e-07 59.3 102 27.5
TPR.G35629 Trifolium pratense HOM05D000017 ORTHO05D000013 5.7e-07 59.3 178 28.7
TWI31G0311 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.7e-07 59.3 103 25.2
CANSAT25G3367 Cannabis sativa HOM05D000017 ORTHO05D000013 7.4e-07 58.9 105 25.7
CANSAT54G2672 Cannabis sativa HOM05D000017 ORTHO05D000013 7.4e-07 58.9 107 29.0
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 7.4e-07 58.9 61 42.6
Peaxi162Scf00551g00057 Petunia axillaris HOM05D000017 ORTHO05D000308 7.4e-07 58.9 111 27.9
Rhsim07G0255600 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.4e-07 58.9 103 27.2
Atru.chr13.2473 Acer truncatum HOM05D000017 ORTHO05D000013 9.7e-07 58.5 107 29.0
Medtr5g081480 Medicago truncatula HOM05D000017 ORTHO05D009934 9.7e-07 58.5 258 23.6
Nitab4.5_0000781g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.7e-07 58.5 111 28.8
AUR62036295 Chenopodium quinoa HOM05D006729 ORTHO05D008502 1.3e-06 58.2 99 34.3
Peaxi162Scf00156g00065 Petunia axillaris HOM05D000017 ORTHO05D000308 1.3e-06 58.2 217 23.5
Peaxi162Scf00175g00109 Petunia axillaris HOM05D000017 ORTHO05D000308 1.3e-06 58.2 111 26.1
PGR142G3264 Punica granatum HOM05D000017 ORTHO05D000013 1.3e-06 58.2 104 30.8
TWI18G0771 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-06 58.2 98 28.6
CANSAT21G0768 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 57.8 99 29.3
CANSAT25G1038 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 57.8 107 29.9
CANSAT64G2354 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 57.8 99 29.3
Ca_26364_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 1.7e-06 57.8 103 28.2
Peaxi162Scf00334g00009 Petunia axillaris HOM05D000017 ORTHO05D000308 1.7e-06 57.8 111 28.8
Prupe.4G046500 Prunus persica HOM05D000017 ORTHO05D000013 1.7e-06 57.8 103 26.2
Sopen02g005760 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-06 57.8 104 29.8
Sopen03g035430 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-06 57.8 104 29.8
Sopen04g025960 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-06 57.8 104 29.8
Sopen08g018320 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-06 57.8 104 29.8
Peaxi162Scf00254g00038 Petunia axillaris HOM05D000017 ORTHO05D000308 2.2e-06 57.4 168 26.2
TWI59G0255 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-06 57.4 100 26.0
ECA248G0790 Erigeron canadensis HOM05D000038 ORTHO05D000143 2.8e-06 57.0 101 29.7
Peaxi162Scf00359g00327 Petunia axillaris HOM05D000017 ORTHO05D000308 2.8e-06 57.0 111 27.9
Peaxi162Scf00538g00532 Petunia axillaris HOM05D000017 ORTHO05D000308 2.8e-06 57.0 111 28.8
Rhsim06G0119600 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.8e-06 57.0 105 27.6
Sed0025847 Sechium edule HOM05D000017 ORTHO05D000308 2.8e-06 57.0 103 26.2
CANSAT01G2010 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-06 56.6 99 29.3
CANSAT80G0855 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-06 56.6 171 24.6
Peaxi162Scf00086g00917 Petunia axillaris HOM05D000017 ORTHO05D000308 3.7e-06 56.6 102 29.4
PGR031G2330 Punica granatum HOM05D000017 ORTHO05D000013 3.7e-06 56.6 101 30.7
vmacro19266 Vaccinium macrocarpon HOM05D000017 ORTHO05D010456 3.7e-06 56.6 62 41.9
Ca_12153_v3 Cicer arietinum L. HOM05D000017 ORTHO05D010612 4.8e-06 56.2 103 28.2
Nitab4.5_0000419g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.8e-06 56.2 111 27.0
Rhsim05G0107300 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.8e-06 56.2 265 25.7
Sed0017191 Sechium edule HOM05D000017 ORTHO05D000013 4.8e-06 56.2 103 27.2
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 6.3e-06 55.8 110 28.2
Peaxi162Scf00266g00052 Petunia axillaris HOM05D000017 ORTHO05D000308 6.3e-06 55.8 111 27.0
CANSAT11G0754 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 55.5 108 27.8
Nitab4.5_0007255g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.2e-06 55.5 134 24.6
Peaxi162Scf00170g00076 Petunia axillaris HOM05D000017 ORTHO05D000308 8.2e-06 55.5 111 28.8
Sopen03g027220 Solanum pennellii HOM05D000909 ORTHO05D000928 8.2e-06 55.5 166 25.3
VMungo0331G1062 Vigna mungo HOM05D000005 ORTHO05D000012 8.2e-06 55.5 101 26.7


User provided reference genes

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