Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 2.3e-204 715.3 351 100.0
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 7.6e-91 338.2 322 58.7
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 3.2e-73 279.6 325 49.8
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 7.9e-72 275.0 323 50.2
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 5.1e-71 272.3 322 49.1
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 7.9e-64 248.4 324 46.3
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 7.9e-64 248.4 324 46.3
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 5.3e-60 235.7 323 45.2
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 9.1e-60 235.0 324 44.1
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 8.5e-58 228.4 322 43.8
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 1.4e-57 227.6 322 43.5
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 2.5e-57 226.9 323 43.3
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.2e-56 224.6 323 42.7
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 2.3e-55 220.3 327 43.1
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 5.7e-54 215.7 322 41.6
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 7.4e-54 215.3 323 42.1
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 9.7e-54 214.9 318 42.1
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 8.2e-53 211.8 318 41.8
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 1.1e-52 211.5 315 42.2
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 1.8e-52 210.7 316 41.1
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 3.5e-51 206.5 323 42.1
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 5.9e-51 205.7 322 40.4
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 7.7e-51 205.3 323 41.2
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 1.0e-50 204.9 252 48.0
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 1.0e-50 204.9 318 40.9
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 1.0e-50 204.9 326 41.1
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 1.0e-50 204.9 316 41.1
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 2.2e-50 203.8 326 41.1
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 1.9e-49 200.7 314 41.7
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 3.2e-49 199.9 323 40.9
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 4.2e-49 199.5 318 40.6
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 9.4e-49 198.4 326 40.2
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 3.6e-48 196.4 306 39.5
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 4.7e-48 196.1 322 40.1
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 4.7e-48 196.1 290 41.7
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 8.0e-48 195.3 323 38.7
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 1.0e-47 194.9 323 39.9
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 2.3e-47 193.7 298 42.3
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 3.0e-47 193.4 321 40.2
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 8.8e-47 191.8 264 44.3
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 8.8e-47 191.8 318 39.9
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 1.1e-46 191.4 318 39.6
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 2.0e-46 190.7 318 40.9
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 3.3e-46 189.9 327 40.7
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 1.3e-45 188.0 284 41.2
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 1.7e-45 187.6 307 38.8
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 2.8e-45 186.8 320 38.4
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 2.8e-45 186.8 309 40.8
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 3.7e-45 186.4 284 41.9
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 8.2e-45 185.3 287 40.8
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 8.2e-45 185.3 307 38.4
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 5.3e-44 182.6 287 40.1
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 5.3e-44 182.6 308 37.7
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 1.2e-43 181.4 287 40.1
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 2.6e-43 180.3 316 39.2
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 3.8e-42 176.4 287 39.7
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 6.5e-42 175.6 329 38.0
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 2.5e-41 173.7 279 41.2
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 3.2e-41 173.3 253 44.3
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 7.2e-41 172.2 322 37.3
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 9.4e-41 171.8 317 37.5
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 9.4e-41 171.8 289 37.0
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 1.6e-40 171.0 318 38.1
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 2.1e-40 170.6 284 40.1
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 2.7e-40 170.2 322 35.7
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 2.7e-40 170.2 144 61.8
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 4.7e-40 169.5 325 38.8
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 8.0e-40 168.7 320 37.5
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 8.0e-40 168.7 295 40.7
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.0e-39 168.3 360 35.3
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 1.4e-39 167.9 317 37.5
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 4.0e-39 166.4 265 40.8
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 5.2e-39 166.0 319 36.4
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 8.8e-39 165.2 322 36.3
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 3.4e-38 163.3 317 37.2
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 9.8e-38 161.8 318 35.2
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 9.8e-38 161.8 267 40.4
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 1.3e-37 161.4 293 36.9
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 2.4e-36 157.1 309 36.2
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 5.4e-36 156.0 284 37.0
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 7.0e-36 155.6 296 36.5
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 3.5e-35 153.3 147 55.8
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 3.5e-35 153.3 329 33.7
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 1.1e-33 148.3 282 36.2
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 2.1e-32 144.1 143 53.1
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 6.1e-32 142.5 144 52.8
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 1.4e-31 141.4 141 55.3
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 4.0e-31 139.8 287 35.5
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.0e-30 137.5 144 52.1
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 2.0e-30 137.5 272 35.7
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 2.0e-30 137.5 310 32.3
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 4.9e-29 132.9 140 50.7
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 1.8e-28 131.0 291 32.0
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 1.2e-27 128.3 130 50.0
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 2.0e-27 127.5 126 53.2
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.7e-26 124.4 210 37.6
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.1e-25 121.7 171 43.3
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 1.9e-25 120.9 274 35.4
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 4.2e-25 119.8 152 50.0
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 8.0e-24 115.5 301 32.6
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 1.4e-23 114.8 108 53.7
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 1.4e-23 114.8 149 47.7
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 1.8e-23 114.4 146 48.6
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 7.5e-22 109.0 323 30.3
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 9.8e-22 108.6 105 58.1
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 3.9e-18 96.7 83 59.0
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.4e-15 88.2 98 46.9
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 5.2e-15 86.3 105 44.8
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 3.6e-08 63.5 111 40.5
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 6.8e-07 59.3 93 31.2
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 6.8e-07 59.3 210 25.7


User provided reference genes

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